RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 KDM2AQ9Y2K7 1162 aa12.38□□□□□ -0.43
RPE-216ENST00000454822 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
RPE-216ENST00000454822 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
RPE-216ENST00000454822 CCER2I3L3R5 266 aa12.37□□□□□ -0.43
RPE-216ENST00000454822 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
RPE-216ENST00000454822 CD109Q6YHK3 1445 aa12.37□□□□□ -0.43
RPE-216ENST00000454822 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
RPE-216ENST00000454822 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
RPE-216ENST00000454822 ATP10AO60312 1499 aa12.35□□□□□ -0.43
RPE-216ENST00000454822 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
RPE-216ENST00000454822 RGL3Q3MIN7 710 aa12.34□□□□□ -0.43
RPE-216ENST00000454822 DHX29Q7Z478 1369 aaKnown RBP12.34□□□□□ -0.43
RPE-216ENST00000454822 USP47Q96K76 1375 aa12.34□□□□□ -0.43
RPE-216ENST00000454822 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
RPE-216ENST00000454822 KIF3BO15066 747 aa12.33□□□□□ -0.44
RPE-216ENST00000454822 CARD11Q9BXL7 1154 aa12.33□□□□□ -0.44
RPE-216ENST00000454822 CYB5RLQ6IPT4 315 aa12.32□□□□□ -0.44
RPE-216ENST00000454822 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
RPE-216ENST00000454822 ZNF518AQ6AHZ1 1483 aa12.32□□□□□ -0.44
RPE-216ENST00000454822 DEPDC5O75140 1603 aa12.32□□□□□ -0.44
RPE-216ENST00000454822 KDM5CP41229 1560 aa12.31□□□□□ -0.44
RPE-216ENST00000454822 KANK1Q14678 1352 aa12.31□□□□□ -0.44
RPE-216ENST00000454822 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
RPE-216ENST00000454822 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
RPE-216ENST00000454822 PRAG1Q86YV5 1406 aa12.3□□□□□ -0.44
RPE-216ENST00000454822 A2MP01023 1474 aa12.3□□□□□ -0.44
RPE-216ENST00000454822 E9PCH4 1651 aa12.29□□□□□ -0.44
RPE-216ENST00000454822 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
RPE-216ENST00000454822 VWDEQ8N2E2 1590 aa12.29□□□□□ -0.44
RPE-216ENST00000454822 POGZQ7Z3K3 1410 aa12.29□□□□□ -0.44
RPE-216ENST00000454822 EIF2AK4Q9P2K8 1649 aaKnown RBP12.29□□□□□ -0.44
RPE-216ENST00000454822 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
RPE-216ENST00000454822 ROCK2O75116 1388 aaKnown RBP12.28□□□□□ -0.44
RPE-216ENST00000454822 PTPRTO14522 1441 aa12.28□□□□□ -0.44
RPE-216ENST00000454822 ARID4BQ4LE39 1312 aaPredicted RBP12.27□□□□□ -0.45
RPE-216ENST00000454822 TET3O43151 1660 aa12.27□□□□□ -0.45
RPE-216ENST00000454822 NEO1Q92859 1461 aa12.27□□□□□ -0.45
RPE-216ENST00000454822 MLH3Q9UHC1 1453 aa12.27□□□□□ -0.45
RPE-216ENST00000454822 ST20-MTHFSA0A0A6YYL1 179 aa12.26□□□□□ -0.45
RPE-216ENST00000454822 NBPF1Q3BBV0 1214 aa12.26□□□□□ -0.45
RPE-216ENST00000454822 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
RPE-216ENST00000454822 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
RPE-216ENST00000454822 MROH1Q8NDA8 1641 aa12.26□□□□□ -0.45
RPE-216ENST00000454822 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
RPE-216ENST00000454822 TRPM2O94759 1503 aa12.26□□□□□ -0.45
RPE-216ENST00000454822 PRDM15P57071 1507 aaPredicted RBP12.26□□□□□ -0.45
RPE-216ENST00000454822 TRPM1Q7Z4N2 1603 aa12.25□□□□□ -0.45
RPE-216ENST00000454822 RAPGEF3O95398 923 aa12.25□□□□□ -0.45
RPE-216ENST00000454822 SPHKAPQ2M3C7 1700 aa12.24□□□□□ -0.45
RPE-216ENST00000454822 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
RPE-216ENST00000454822 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
RPE-216ENST00000454822 GPRASP1Q5JY77 1395 aa12.23□□□□□ -0.45
RPE-216ENST00000454822 HECW2Q9P2P5 1572 aa12.23□□□□□ -0.45
RPE-216ENST00000454822 CLTCL1P53675 1640 aa12.22□□□□□ -0.45
RPE-216ENST00000454822 MAP3K4Q9Y6R4 1608 aa12.22□□□□□ -0.45
RPE-216ENST00000454822 GLI2P10070 1586 aa12.21□□□□□ -0.45
RPE-216ENST00000454822 FRMPD1Q5SYB0 1578 aa12.21□□□□□ -0.45
RPE-216ENST00000454822 LMTK2Q8IWU2 1503 aa12.2□□□□□ -0.46
RPE-216ENST00000454822 CEP152O94986 1710 aa12.2□□□□□ -0.46
RPE-216ENST00000454822 GGT6Q6P531 493 aa12.2□□□□□ -0.46
RPE-216ENST00000454822 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
RPE-216ENST00000454822 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
RPE-216ENST00000454822 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
RPE-216ENST00000454822 EFCAB6Q5THR3 1501 aa12.19□□□□□ -0.46
RPE-216ENST00000454822 LAMC1P11047 1609 aa12.19□□□□□ -0.46
RPE-216ENST00000454822 CCDC184Q52MB2 194 aa12.19□□□□□ -0.46
RPE-216ENST00000454822 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
RPE-216ENST00000454822 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
RPE-216ENST00000454822 PPRC1Q5VV67 1664 aaKnown RBP12.18□□□□□ -0.46
RPE-216ENST00000454822 RICTORQ6R327 1708 aa12.16□□□□□ -0.46
RPE-216ENST00000454822 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
RPE-216ENST00000454822 TESK2Q96S53 571 aa12.16□□□□□ -0.46
RPE-216ENST00000454822 MADDQ8WXG6 1647 aa12.16□□□□□ -0.46
RPE-216ENST00000454822 WASHC2CQ9Y4E1 1318 aa12.16□□□□□ -0.46
RPE-216ENST00000454822 UGGT1Q9NYU2 1555 aa12.16□□□□□ -0.46
RPE-216ENST00000454822 DIP2CQ9Y2E4 1556 aa12.15□□□□□ -0.46
RPE-216ENST00000454822 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
RPE-216ENST00000454822 NPATQ14207 1427 aa12.14□□□□□ -0.47
RPE-216ENST00000454822 DIP2BQ9P265 1576 aa12.14□□□□□ -0.47
RPE-216ENST00000454822 YEATS2Q9ULM3 1422 aa12.13□□□□□ -0.47
RPE-216ENST00000454822 KIF1BO60333 1816 aa12.13□□□□□ -0.47
RPE-216ENST00000454822 ABCC3O15438 1527 aa12.13□□□□□ -0.47
RPE-216ENST00000454822 HNRNPUQ00839 825 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPE-216ENST00000454822 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
RPE-216ENST00000454822 CFAP65Q6ZU64 1925 aaKnown RBP12.12□□□□□ -0.47
RPE-216ENST00000454822 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
RPE-216ENST00000454822 TMF1P82094 1093 aa12.11□□□□□ -0.47
RPE-216ENST00000454822 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
RPE-216ENST00000454822 COL17A1Q9UMD9 1497 aaPredicted RBP12.11□□□□□ -0.47
RPE-216ENST00000454822 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
RPE-216ENST00000454822 FAM9BQ8IZU0 186 aa12.11□□□□□ -0.47
RPE-216ENST00000454822 MYOM2P54296 1465 aa12.1□□□□□ -0.47
RPE-216ENST00000454822 TSPOAP1O95153 1857 aa12.1□□□□□ -0.47
RPE-216ENST00000454822 CFAP70Q5T0N1 1121 aa12.1□□□□□ -0.47
RPE-216ENST00000454822 SCAF11Q99590 1463 aaKnown RBP12.09□□□□□ -0.47
RPE-216ENST00000454822 IQGAP1P46940 1657 aa12.09□□□□□ -0.47
RPE-216ENST00000454822 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.47
RPE-216ENST00000454822 MROH2AA6NES4 1674 aa12.08□□□□□ -0.47
RPE-216ENST00000454822 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
RPE-216ENST00000454822 ADGRB3O60242 1522 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms