RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 CLTCQ00610 1675 aaKnown RBP23.73■■□□□ 1.39
RFC5-204ENST00000454402 WASHC2CQ9Y4E1 1318 aa23.71■■□□□ 1.39
RFC5-204ENST00000454402 ERBINQ96RT1 1412 aa23.7■■□□□ 1.38
RFC5-204ENST00000454402 EIF2AK4Q9P2K8 1649 aaKnown RBP23.69■■□□□ 1.38
RFC5-204ENST00000454402 CNTLNQ9NXG0 1405 aa23.68■■□□□ 1.38
RFC5-204ENST00000454402 ANKRD50Q9ULJ7 1429 aa23.67■■□□□ 1.38
RFC5-204ENST00000454402 ZMYM3Q14202 1370 aa23.67■■□□□ 1.38
RFC5-204ENST00000454402 ROCK1Q13464 1354 aa23.66■■□□□ 1.38
RFC5-204ENST00000454402 C3P01024 1663 aa23.66■■□□□ 1.38
RFC5-204ENST00000454402 RNF17Q9BXT8 1623 aaKnown RBP23.64■■□□□ 1.38
RFC5-204ENST00000454402 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.38
RFC5-204ENST00000454402 PPP6R1Q9UPN7 881 aa23.64■■□□□ 1.37
RFC5-204ENST00000454402 MROH1Q8NDA8 1641 aa23.62■■□□□ 1.37
RFC5-204ENST00000454402 MROH2AA6NES4 1674 aa23.59■■□□□ 1.37
RFC5-204ENST00000454402 KANK1Q14678 1352 aa23.59■■□□□ 1.37
RFC5-204ENST00000454402 ABCC3O15438 1527 aa23.59■■□□□ 1.37
RFC5-204ENST00000454402 CEP152O94986 1710 aa23.59■■□□□ 1.37
RFC5-204ENST00000454402 FBXO31Q5XUX0 539 aaPredicted RBP23.57■■□□□ 1.36
RFC5-204ENST00000454402 PRDM15P57071 1507 aaPredicted RBP23.56■■□□□ 1.36
RFC5-204ENST00000454402 DEPDC5O75140 1603 aa23.54■■□□□ 1.36
RFC5-204ENST00000454402 HSPA2P54652 639 aa23.54■■□□□ 1.36
RFC5-204ENST00000454402 NAIPQ13075 1403 aa23.53■■□□□ 1.36
RFC5-204ENST00000454402 ZC3H13Q5T200 1668 aaKnown RBP23.52■■□□□ 1.36
RFC5-204ENST00000454402 FAM135AQ9P2D6 1515 aa23.51■■□□□ 1.35
RFC5-204ENST00000454402 CAMSAP1Q5T5Y3 1602 aa23.51■■□□□ 1.35
RFC5-204ENST00000454402 UHRF1BP1Q6BDS2 1440 aa23.5■■□□□ 1.35
RFC5-204ENST00000454402 PZPP20742 1482 aa23.5■■□□□ 1.35
RFC5-204ENST00000454402 LMTK3Q96Q04 1460 aa23.5■■□□□ 1.35
RFC5-204ENST00000454402 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
RFC5-204ENST00000454402 NUP155O75694 1391 aa23.48■■□□□ 1.35
RFC5-204ENST00000454402 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
RFC5-204ENST00000454402 HFM1A2PYH4 1435 aa23.48■■□□□ 1.35
RFC5-204ENST00000454402 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
RFC5-204ENST00000454402 NPATQ14207 1427 aa23.47■■□□□ 1.35
RFC5-204ENST00000454402 UNC13BO14795 1591 aa23.47■■□□□ 1.35
RFC5-204ENST00000454402 TNRQ92752 1358 aa23.45■■□□□ 1.35
RFC5-204ENST00000454402 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
RFC5-204ENST00000454402 CFAP65Q6ZU64 1925 aaKnown RBP23.44■■□□□ 1.34
RFC5-204ENST00000454402 MYO3AQ8NEV4 1616 aa23.42■■□□□ 1.34
RFC5-204ENST00000454402 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
RFC5-204ENST00000454402 LMTK2Q8IWU2 1503 aa23.41■■□□□ 1.34
RFC5-204ENST00000454402 EFCAB6Q5THR3 1501 aa23.39■■□□□ 1.34
RFC5-204ENST00000454402 SETD1BQ9UPS6 1966 aaKnown RBP23.38■■□□□ 1.33
RFC5-204ENST00000454402 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
RFC5-204ENST00000454402 IQGAP3Q86VI3 1631 aa23.37■■□□□ 1.33
RFC5-204ENST00000454402 SPATA31D1Q6ZQQ2 1576 aa23.36■■□□□ 1.33
RFC5-204ENST00000454402 TET3O43151 1660 aa23.36■■□□□ 1.33
RFC5-204ENST00000454402 CEP170BQ9Y4F5 1589 aaPredicted RBP23.35■■□□□ 1.33
RFC5-204ENST00000454402 SETD5Q9C0A6 1442 aa23.35■■□□□ 1.33
RFC5-204ENST00000454402 A2ML1A8K2U0 1454 aa23.31■■□□□ 1.32
RFC5-204ENST00000454402 E9PCH4 1651 aa23.31■■□□□ 1.32
RFC5-204ENST00000454402 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
RFC5-204ENST00000454402 RAB3GAP2Q9H2M9 1393 aa23.31■■□□□ 1.32
RFC5-204ENST00000454402 ZNF142P52746 1687 aaPredicted RBP23.29■■□□□ 1.32
RFC5-204ENST00000454402 STAG3Q9UJ98 1225 aa23.29■■□□□ 1.32
RFC5-204ENST00000454402 NLRP1Q9C000 1473 aa23.29■■□□□ 1.32
RFC5-204ENST00000454402 SYNMO15061 1565 aa23.27■■□□□ 1.32
RFC5-204ENST00000454402 PKD2Q13563 968 aa23.27■■□□□ 1.32
RFC5-204ENST00000454402 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
RFC5-204ENST00000454402 RPRD2Q5VT52 1461 aaKnown RBP23.27■■□□□ 1.32
RFC5-204ENST00000454402 NCKAP5LQ9HCH0 1330 aa23.26■■□□□ 1.31
RFC5-204ENST00000454402 IDI1Q13907 227 aa23.26■■□□□ 1.31
RFC5-204ENST00000454402 FOXD1Q16676 465 aa23.26■■□□□ 1.31
RFC5-204ENST00000454402 CHGAP10645 457 aaKnown RBP23.25■■□□□ 1.31
RFC5-204ENST00000454402 NOS1P29475 1434 aa23.25■■□□□ 1.31
RFC5-204ENST00000454402 THEMISQ8N1K5 641 aaPredicted RBP23.23■■□□□ 1.31
RFC5-204ENST00000454402 PIK3C2BO00750 1634 aa23.23■■□□□ 1.31
RFC5-204ENST00000454402 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
RFC5-204ENST00000454402 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
RFC5-204ENST00000454402 STRCQ7RTU9 1775 aa23.19■■□□□ 1.3
RFC5-204ENST00000454402 SLC52A1Q9NWF4 448 aa23.19■■□□□ 1.3
RFC5-204ENST00000454402 UBR1Q8IWV7 1749 aa23.18■■□□□ 1.3
RFC5-204ENST00000454402 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
RFC5-204ENST00000454402 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
RFC5-204ENST00000454402 ANKLE2Q86XL3 938 aa23.15■■□□□ 1.3
RFC5-204ENST00000454402 PLA2R1Q13018 1463 aa23.14■■□□□ 1.3
RFC5-204ENST00000454402 ADGRB3O60242 1522 aa23.13■■□□□ 1.29
RFC5-204ENST00000454402 DMRT2Q9Y5R5 561 aa23.12■■□□□ 1.29
RFC5-204ENST00000454402 TXNDC2Q86VQ3 553 aa23.11■■□□□ 1.29
RFC5-204ENST00000454402 PTPRTO14522 1441 aa23.11■■□□□ 1.29
RFC5-204ENST00000454402 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
RFC5-204ENST00000454402 LTKP29376 864 aa23.09■■□□□ 1.29
RFC5-204ENST00000454402 EID1Q9Y6B2 187 aa23.09■■□□□ 1.29
RFC5-204ENST00000454402 CLTCL1P53675 1640 aa23.08■■□□□ 1.29
RFC5-204ENST00000454402 TRPM2O94759 1503 aa23.08■■□□□ 1.29
RFC5-204ENST00000454402 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
RFC5-204ENST00000454402 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
RFC5-204ENST00000454402 ZNF326Q5BKZ1 582 aaKnown RBP23.08■■□□□ 1.29
RFC5-204ENST00000454402 POLR1AO95602 1720 aaPredicted RBP23.08■■□□□ 1.29
RFC5-204ENST00000454402 MYO5BQ9ULV0 1848 aa23.07■■□□□ 1.28
RFC5-204ENST00000454402 TMEM131LA2VDJ0 1609 aa23.07■■□□□ 1.28
RFC5-204ENST00000454402 BCANQ96GW7 911 aa23.06■■□□□ 1.28
RFC5-204ENST00000454402 NEURL4Q96JN8 1562 aa23.05■■□□□ 1.28
RFC5-204ENST00000454402 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
RFC5-204ENST00000454402 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
RFC5-204ENST00000454402 HRCP23327 699 aa23.04■■□□□ 1.28
RFC5-204ENST00000454402 NPHP4O75161 1426 aaPredicted RBP23.04■■□□□ 1.28
RFC5-204ENST00000454402 SLIT1O75093 1534 aa23.04■■□□□ 1.28
RFC5-204ENST00000454402 ARHGAP23Q9P227 1491 aa23.03■■□□□ 1.28
RFC5-204ENST00000454402 KDM5AP29375 1690 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms