RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 MYOM3Q5VTT5 1437 aa10.99□□□□□ -0.65
BRCC3-208ENST00000453705 CARMIL2Q6F5E8 1435 aa10.99□□□□□ -0.65
BRCC3-208ENST00000453705 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
BRCC3-208ENST00000453705 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
BRCC3-208ENST00000453705 AAMPQ13685 434 aa10.97□□□□□ -0.65
BRCC3-208ENST00000453705 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
BRCC3-208ENST00000453705 E9PSI1 815 aa10.97□□□□□ -0.65
BRCC3-208ENST00000453705 CROCC2H7BZ55 1655 aa10.95□□□□□ -0.66
BRCC3-208ENST00000453705 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
BRCC3-208ENST00000453705 CLSTN1O94985 981 aa10.94□□□□□ -0.66
BRCC3-208ENST00000453705 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
BRCC3-208ENST00000453705 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
BRCC3-208ENST00000453705 ACIN1Q9UKV3 1341 aaKnown RBP10.93□□□□□ -0.66
BRCC3-208ENST00000453705 MSH5O43196 834 aa10.93□□□□□ -0.66
BRCC3-208ENST00000453705 ADGBQ8N7X0 1667 aa10.93□□□□□ -0.66
BRCC3-208ENST00000453705 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
BRCC3-208ENST00000453705 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
BRCC3-208ENST00000453705 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
BRCC3-208ENST00000453705 CDK13Q14004 1512 aaKnown RBP10.92□□□□□ -0.66
BRCC3-208ENST00000453705 UHRF1BP1LA0JNW5 1464 aa10.92□□□□□ -0.66
BRCC3-208ENST00000453705 TROQ12816 1431 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-208ENST00000453705 DHX57Q6P158 1386 aaKnown RBP10.91□□□□□ -0.66
BRCC3-208ENST00000453705 ZNF326Q5BKZ1 582 aaKnown RBP10.91□□□□□ -0.66
BRCC3-208ENST00000453705 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
BRCC3-208ENST00000453705 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
BRCC3-208ENST00000453705 CDC42BPAQ5VT25 1732 aa10.9□□□□□ -0.66
BRCC3-208ENST00000453705 KIF14Q15058 1648 aa10.89□□□□□ -0.67
BRCC3-208ENST00000453705 ABCC10Q5T3U5 1492 aa10.88□□□□□ -0.67
BRCC3-208ENST00000453705 MAPKBP1O60336 1514 aa10.88□□□□□ -0.67
BRCC3-208ENST00000453705 IRF5Q13568 498 aa10.87□□□□□ -0.67
BRCC3-208ENST00000453705 P3H3Q8IVL6 736 aa10.87□□□□□ -0.67
BRCC3-208ENST00000453705 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
BRCC3-208ENST00000453705 ROCK1Q13464 1354 aa10.87□□□□□ -0.67
BRCC3-208ENST00000453705 JPH4Q96JJ6 628 aa10.87□□□□□ -0.67
BRCC3-208ENST00000453705 ARHGEF5Q12774 1597 aa10.87□□□□□ -0.67
BRCC3-208ENST00000453705 PREX2Q70Z35 1606 aa10.86□□□□□ -0.67
BRCC3-208ENST00000453705 CNPY4Q8N129 248 aa10.86□□□□□ -0.67
BRCC3-208ENST00000453705 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
BRCC3-208ENST00000453705 CCER1Q8TC90 406 aaPredicted RBP10.86□□□□□ -0.67
BRCC3-208ENST00000453705 ADGRL2O95490 1459 aa10.86□□□□□ -0.67
BRCC3-208ENST00000453705 SHANK2Q9UPX8 1470 aa10.86□□□□□ -0.67
BRCC3-208ENST00000453705 CC2D2BQ6DHV5 1058 aa10.85□□□□□ -0.67
BRCC3-208ENST00000453705 CLUAP1Q96AJ1 413 aa10.85□□□□□ -0.67
BRCC3-208ENST00000453705 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
BRCC3-208ENST00000453705 PLB1Q6P1J6 1458 aa10.85□□□□□ -0.67
BRCC3-208ENST00000453705 PRG4Q92954 1404 aaPredicted RBP10.85□□□□□ -0.67
BRCC3-208ENST00000453705 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
BRCC3-208ENST00000453705 ATP10BO94823 1461 aa10.84□□□□□ -0.67
BRCC3-208ENST00000453705 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
BRCC3-208ENST00000453705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
BRCC3-208ENST00000453705 RAB3GAP2Q9H2M9 1393 aa10.83□□□□□ -0.68
BRCC3-208ENST00000453705 MAST1Q9Y2H9 1570 aa10.83□□□□□ -0.68
BRCC3-208ENST00000453705 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
BRCC3-208ENST00000453705 RETREG2Q8NC44 543 aa10.82□□□□□ -0.68
BRCC3-208ENST00000453705 NAIPQ13075 1403 aa10.82□□□□□ -0.68
BRCC3-208ENST00000453705 GPATCH8Q9UKJ3 1502 aaKnown RBP10.82□□□□□ -0.68
BRCC3-208ENST00000453705 PTPRKQ15262 1439 aa10.82□□□□□ -0.68
BRCC3-208ENST00000453705 UACAQ9BZF9 1416 aa10.82□□□□□ -0.68
BRCC3-208ENST00000453705 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
BRCC3-208ENST00000453705 SMARCA5O60264 1052 aaPredicted RBP10.81□□□□□ -0.68
BRCC3-208ENST00000453705 NCLP19338 710 aaKnown RBP10.81□□□□□ -0.68
BRCC3-208ENST00000453705 WDR70Q9NW82 654 aa10.81□□□□□ -0.68
BRCC3-208ENST00000453705 MYO5CQ9NQX4 1742 aa10.8□□□□□ -0.68
BRCC3-208ENST00000453705 TEX2Q8IWB9 1127 aa10.8□□□□□ -0.68
BRCC3-208ENST00000453705 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
BRCC3-208ENST00000453705 ZCCHC11Q5TAX3 1644 aaKnown RBP10.8□□□□□ -0.68
BRCC3-208ENST00000453705 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
BRCC3-208ENST00000453705 KCNV2Q8TDN2 545 aa10.8□□□□□ -0.68
BRCC3-208ENST00000453705 CCDC125Q86Z20 511 aa10.79□□□□□ -0.68
BRCC3-208ENST00000453705 DAPK1P53355 1430 aa10.79□□□□□ -0.68
BRCC3-208ENST00000453705 CAMSAP2Q08AD1 1489 aa10.79□□□□□ -0.68
BRCC3-208ENST00000453705 FBXW7Q969H0 707 aa10.79□□□□□ -0.68
BRCC3-208ENST00000453705 PTPRGP23470 1445 aa10.79□□□□□ -0.68
BRCC3-208ENST00000453705 KDM5DQ9BY66 1539 aa10.78□□□□□ -0.68
BRCC3-208ENST00000453705 ERCC6L2Q5T890 1561 aa10.78□□□□□ -0.68
BRCC3-208ENST00000453705 RBM10P98175 930 aaKnown RBP10.76□□□□□ -0.69
BRCC3-208ENST00000453705 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
BRCC3-208ENST00000453705 ABCC5O15440 1437 aa10.76□□□□□ -0.69
BRCC3-208ENST00000453705 PLXNC1O60486 1568 aa10.75□□□□□ -0.69
BRCC3-208ENST00000453705 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
BRCC3-208ENST00000453705 UNCXA6NJT0 531 aa10.74□□□□□ -0.69
BRCC3-208ENST00000453705 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
BRCC3-208ENST00000453705 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
BRCC3-208ENST00000453705 BRD1O95696 1058 aa10.73□□□□□ -0.69
BRCC3-208ENST00000453705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.72□□□□□ -0.69
BRCC3-208ENST00000453705 TTC37Q6PGP7 1564 aa10.72□□□□□ -0.69
BRCC3-208ENST00000453705 FAM43BQ6ZT52 329 aaPredicted RBP10.72□□□□□ -0.69
BRCC3-208ENST00000453705 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
BRCC3-208ENST00000453705 PLCD4Q9BRC7 762 aa10.71□□□□□ -0.69
BRCC3-208ENST00000453705 KDM6BO15054 1643 aa10.71□□□□□ -0.69
BRCC3-208ENST00000453705 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.69
BRCC3-208ENST00000453705 KIAA1107Q9UPP5 1409 aa10.71□□□□□ -0.7
BRCC3-208ENST00000453705 DENND4BO75064 1496 aaPredicted RBP10.7□□□□□ -0.7
BRCC3-208ENST00000453705 UNC13BO14795 1591 aa10.7□□□□□ -0.7
BRCC3-208ENST00000453705 MBD5Q9P267 1494 aa10.7□□□□□ -0.7
BRCC3-208ENST00000453705 ZNF777Q9ULD5 760 aaPredicted RBP10.7□□□□□ -0.7
BRCC3-208ENST00000453705 FAM50AQ14320 339 aaKnown RBP10.69□□□□□ -0.7
BRCC3-208ENST00000453705 GTPBP6O43824 516 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-208ENST00000453705 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
BRCC3-208ENST00000453705 NCOA1Q15788 1441 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms