RNA–Protein interactions for RNA: ENST00000450295.5

SEMA4D-212, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-212ENST00000450295 STK26Q9P289 416 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
SEMA4D-212ENST00000450295 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
SEMA4D-212ENST00000450295 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
SEMA4D-212ENST00000450295 CUL7Q14999 1698 aa16.39■□□□□ 0.21
SEMA4D-212ENST00000450295 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
SEMA4D-212ENST00000450295 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
SEMA4D-212ENST00000450295 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
SEMA4D-212ENST00000450295 GOLGA6L3A6NEY3 463 aa16.36■□□□□ 0.21
SEMA4D-212ENST00000450295 CHMP4AQ9BY43 222 aa16.36■□□□□ 0.21
SEMA4D-212ENST00000450295 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
SEMA4D-212ENST00000450295 GBP4Q96PP9 640 aa16.35■□□□□ 0.21
SEMA4D-212ENST00000450295 ANKRD50Q9ULJ7 1429 aa16.35■□□□□ 0.21
SEMA4D-212ENST00000450295 TROQ12816 1431 aaPredicted RBP16.35■□□□□ 0.21
SEMA4D-212ENST00000450295 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
SEMA4D-212ENST00000450295 DRC7Q8IY82 874 aa16.34■□□□□ 0.21
SEMA4D-212ENST00000450295 A0A0G2JS52 829 aa16.34■□□□□ 0.21
SEMA4D-212ENST00000450295 NLRP13Q86W25 1043 aa16.34■□□□□ 0.21
SEMA4D-212ENST00000450295 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.21
SEMA4D-212ENST00000450295 KCNJ4P48050 445 aa16.32■□□□□ 0.2
SEMA4D-212ENST00000450295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEMA4D-212ENST00000450295 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
SEMA4D-212ENST00000450295 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
SEMA4D-212ENST00000450295 GOLGA6L4A6NEF3 574 aa16.31■□□□□ 0.2
SEMA4D-212ENST00000450295 PTMSP20962 102 aa16.31■□□□□ 0.2
SEMA4D-212ENST00000450295 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
SEMA4D-212ENST00000450295 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
SEMA4D-212ENST00000450295 MCCP23508 829 aa16.31■□□□□ 0.2
SEMA4D-212ENST00000450295 FGD1P98174 961 aa16.3■□□□□ 0.2
SEMA4D-212ENST00000450295 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
SEMA4D-212ENST00000450295 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
SEMA4D-212ENST00000450295 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
SEMA4D-212ENST00000450295 IQGAP2Q13576 1575 aa16.29■□□□□ 0.2
SEMA4D-212ENST00000450295 APBB1O00213 710 aa16.29■□□□□ 0.2
SEMA4D-212ENST00000450295 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-212ENST00000450295 FAM69CQ0P6D2 419 aa16.28■□□□□ 0.2
SEMA4D-212ENST00000450295 PDE3BQ13370 1112 aa16.28■□□□□ 0.2
SEMA4D-212ENST00000450295 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
SEMA4D-212ENST00000450295 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
SEMA4D-212ENST00000450295 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.19
SEMA4D-212ENST00000450295 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.19
SEMA4D-212ENST00000450295 USP47Q96K76 1375 aa16.26■□□□□ 0.19
SEMA4D-212ENST00000450295 ZNF644Q9H582 1327 aaPredicted RBP16.26■□□□□ 0.19
SEMA4D-212ENST00000450295 NRDCO43847 1150 aa16.26■□□□□ 0.19
SEMA4D-212ENST00000450295 EVC2Q86UK5 1308 aa16.26■□□□□ 0.19
SEMA4D-212ENST00000450295 FANCIQ9NVI1 1328 aa16.26■□□□□ 0.19
SEMA4D-212ENST00000450295 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
SEMA4D-212ENST00000450295 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
SEMA4D-212ENST00000450295 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-212ENST00000450295 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEMA4D-212ENST00000450295 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
SEMA4D-212ENST00000450295 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
SEMA4D-212ENST00000450295 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
SEMA4D-212ENST00000450295 HFM1A2PYH4 1435 aa16.24■□□□□ 0.19
SEMA4D-212ENST00000450295 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
SEMA4D-212ENST00000450295 PDE4AP27815 886 aa16.24■□□□□ 0.19
SEMA4D-212ENST00000450295 MYBBP1AQ9BQG0 1328 aaKnown RBP16.24■□□□□ 0.19
SEMA4D-212ENST00000450295 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
SEMA4D-212ENST00000450295 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
SEMA4D-212ENST00000450295 SUPT6HQ7KZ85 1726 aaKnown RBP16.23■□□□□ 0.19
SEMA4D-212ENST00000450295 GSE1Q14687 1217 aa16.23■□□□□ 0.19
SEMA4D-212ENST00000450295 LMOD3Q0VAK6 560 aa16.22■□□□□ 0.19
SEMA4D-212ENST00000450295 TRAK1Q9UPV9 953 aa16.22■□□□□ 0.19
SEMA4D-212ENST00000450295 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.19
SEMA4D-212ENST00000450295 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.19
SEMA4D-212ENST00000450295 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
SEMA4D-212ENST00000450295 C9orf84Q5VXU9 1444 aa16.2■□□□□ 0.18
SEMA4D-212ENST00000450295 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
SEMA4D-212ENST00000450295 EPRSP07814 1512 aaKnown RBP16.2■□□□□ 0.18
SEMA4D-212ENST00000450295 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
SEMA4D-212ENST00000450295 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
SEMA4D-212ENST00000450295 NGDNQ8NEJ9 315 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-212ENST00000450295 HSP90AA2PQ14568 343 aaPredicted RBP16.19■□□□□ 0.18
SEMA4D-212ENST00000450295 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
SEMA4D-212ENST00000450295 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
SEMA4D-212ENST00000450295 PLIN1O60240 522 aa16.19■□□□□ 0.18
SEMA4D-212ENST00000450295 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
SEMA4D-212ENST00000450295 SOX12O15370 315 aa16.17■□□□□ 0.18
SEMA4D-212ENST00000450295 RRP1P56182 461 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-212ENST00000450295 CLUAP1Q96AJ1 413 aa16.17■□□□□ 0.18
SEMA4D-212ENST00000450295 ROCK1Q13464 1354 aa16.16■□□□□ 0.18
SEMA4D-212ENST00000450295 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
SEMA4D-212ENST00000450295 PANK3Q9H999 370 aa16.16■□□□□ 0.18
SEMA4D-212ENST00000450295 FAM161AQ3B820 660 aa16.15■□□□□ 0.18
SEMA4D-212ENST00000450295 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
SEMA4D-212ENST00000450295 HDAC5Q9UQL6 1122 aa16.15■□□□□ 0.18
SEMA4D-212ENST00000450295 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-212ENST00000450295 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
SEMA4D-212ENST00000450295 CRBNQ96SW2 442 aa16.14■□□□□ 0.18
SEMA4D-212ENST00000450295 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
SEMA4D-212ENST00000450295 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.17
SEMA4D-212ENST00000450295 PRKRIP1Q9H875 184 aaPredicted RBP16.13■□□□□ 0.17
SEMA4D-212ENST00000450295 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
SEMA4D-212ENST00000450295 DAPK1P53355 1430 aa16.13■□□□□ 0.17
SEMA4D-212ENST00000450295 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
SEMA4D-212ENST00000450295 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
SEMA4D-212ENST00000450295 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
SEMA4D-212ENST00000450295 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
SEMA4D-212ENST00000450295 CSB-PGBD3P0DP91 1061 aa16.12■□□□□ 0.17
SEMA4D-212ENST00000450295 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms