RNA–Protein interactions for RNA: ENST00000448786.1

AC007879.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC007879.3, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-202ENST00000448786 ZBED2Q9BTP6 218 aa9.6□□□□□ -0.87
AC007879.3-202ENST00000448786 HCSTQ9UBK5 93 aa9.6□□□□□ -0.87
AC007879.3-202ENST00000448786 GOLGA8CPA6NN73 597 aa9.59□□□□□ -0.87
AC007879.3-202ENST00000448786 TSHZ2Q9NRE2 1034 aa9.59□□□□□ -0.87
AC007879.3-202ENST00000448786 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
AC007879.3-202ENST00000448786 NBPF3Q9H094 633 aa9.58□□□□□ -0.88
AC007879.3-202ENST00000448786 MRPL50Q8N5N7 158 aaKnown RBP9.57□□□□□ -0.88
AC007879.3-202ENST00000448786 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
AC007879.3-202ENST00000448786 ARIH1Q9Y4X5 557 aaPredicted RBP9.57□□□□□ -0.88
AC007879.3-202ENST00000448786 NBR1Q14596 966 aa9.56□□□□□ -0.88
AC007879.3-202ENST00000448786 C6orf132Q5T0Z8 1188 aa9.56□□□□□ -0.88
AC007879.3-202ENST00000448786 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
AC007879.3-202ENST00000448786 MAP3K7O43318 606 aa9.53□□□□□ -0.88
AC007879.3-202ENST00000448786 COL9A1P20849 921 aa9.53□□□□□ -0.88
AC007879.3-202ENST00000448786 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
AC007879.3-202ENST00000448786 PLA2G2EQ9NZK7 142 aa9.52□□□□□ -0.89
AC007879.3-202ENST00000448786 RABGEF1Q9UJ41 708 aa9.52□□□□□ -0.89
AC007879.3-202ENST00000448786 EN1Q05925 392 aaPredicted RBP9.51□□□□□ -0.89
AC007879.3-202ENST00000448786 PROX2Q3B8N5 592 aa9.51□□□□□ -0.89
AC007879.3-202ENST00000448786 WNT2BQ93097 391 aa9.5□□□□□ -0.89
AC007879.3-202ENST00000448786 ONECUT3O60422 494 aaPredicted RBP9.49□□□□□ -0.89
AC007879.3-202ENST00000448786 PTPN5P54829 565 aa9.49□□□□□ -0.89
AC007879.3-202ENST00000448786 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
AC007879.3-202ENST00000448786 KIAA1468Q9P260 1216 aa9.48□□□□□ -0.89
AC007879.3-202ENST00000448786 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
AC007879.3-202ENST00000448786 TRIM6-TRIM34B2RNG4 842 aa9.46□□□□□ -0.9
AC007879.3-202ENST00000448786 THSD4Q6ZMP0 1018 aa9.46□□□□□ -0.9
AC007879.3-202ENST00000448786 LAPTM4BQ86VI4 370 aa9.46□□□□□ -0.9
AC007879.3-202ENST00000448786 ANKK1Q8NFD2 765 aa9.46□□□□□ -0.9
AC007879.3-202ENST00000448786 TSR1Q2NL82 804 aaKnown RBP9.45□□□□□ -0.9
AC007879.3-202ENST00000448786 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
AC007879.3-202ENST00000448786 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
AC007879.3-202ENST00000448786 CERKQ8TCT0 537 aa9.45□□□□□ -0.9
AC007879.3-202ENST00000448786 KCNV2Q8TDN2 545 aa9.43□□□□□ -0.9
AC007879.3-202ENST00000448786 OSBPP22059 807 aa9.42□□□□□ -0.9
AC007879.3-202ENST00000448786 SEPT9Q9UHD8 586 aaPredicted RBP9.41□□□□□ -0.9
AC007879.3-202ENST00000448786 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
AC007879.3-202ENST00000448786 ZFRQ96KR1 1074 aaKnown RBP9.4□□□□□ -0.9
AC007879.3-202ENST00000448786 PRSS12P56730 875 aa9.39□□□□□ -0.91
AC007879.3-202ENST00000448786 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
AC007879.3-202ENST00000448786 PRIM1P49642 420 aaKnown RBP9.38□□□□□ -0.91
AC007879.3-202ENST00000448786 TSKSQ9UJT2 592 aa9.38□□□□□ -0.91
AC007879.3-202ENST00000448786 SOWAHBA6NEL2 793 aa9.37□□□□□ -0.91
AC007879.3-202ENST00000448786 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
AC007879.3-202ENST00000448786 NBPF26B4DH59 902 aa9.36□□□□□ -0.91
AC007879.3-202ENST00000448786 BCAMP50895 628 aa9.36□□□□□ -0.91
AC007879.3-202ENST00000448786 LRCH3Q96II8 777 aa9.36□□□□□ -0.91
AC007879.3-202ENST00000448786 CDHR5Q9HBB8 845 aa9.35□□□□□ -0.91
AC007879.3-202ENST00000448786 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.35□□□□□ -0.91
AC007879.3-202ENST00000448786 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
AC007879.3-202ENST00000448786 NYAP1Q6ZVC0 841 aa9.33□□□□□ -0.92
AC007879.3-202ENST00000448786 RBM27Q9P2N5 1060 aaKnown RBP9.33□□□□□ -0.92
AC007879.3-202ENST00000448786 HDGFP51858 240 aaKnown RBP9.32□□□□□ -0.92
AC007879.3-202ENST00000448786 TATDN2Q93075 761 aa9.32□□□□□ -0.92
AC007879.3-202ENST00000448786 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
AC007879.3-202ENST00000448786 SMAPO00193 183 aa9.31□□□□□ -0.92
AC007879.3-202ENST00000448786 FAM198AQ9UFP1 575 aa9.3□□□□□ -0.92
AC007879.3-202ENST00000448786 TSR3Q9UJK0 312 aaKnown RBP9.3□□□□□ -0.92
AC007879.3-202ENST00000448786 HPS5Q9UPZ3 1129 aa9.3□□□□□ -0.92
AC007879.3-202ENST00000448786 NUDT18Q6ZVK8 323 aa9.29□□□□□ -0.92
AC007879.3-202ENST00000448786 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
AC007879.3-202ENST00000448786 NUTM2FA1L443 756 aa9.28□□□□□ -0.92
AC007879.3-202ENST00000448786 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
AC007879.3-202ENST00000448786 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
AC007879.3-202ENST00000448786 SEMA3EO15041 775 aa9.27□□□□□ -0.93
AC007879.3-202ENST00000448786 PPP4CP60510 307 aa9.27□□□□□ -0.93
AC007879.3-202ENST00000448786 IFFO2Q5TF58 517 aa9.27□□□□□ -0.93
AC007879.3-202ENST00000448786 SMYD5Q6GMV2 418 aa9.27□□□□□ -0.93
AC007879.3-202ENST00000448786 SAMD7Q7Z3H4 446 aa9.27□□□□□ -0.93
AC007879.3-202ENST00000448786 SLC4A3P48751 1232 aa9.25□□□□□ -0.93
AC007879.3-202ENST00000448786 RNF40O75150 1001 aa9.24□□□□□ -0.93
AC007879.3-202ENST00000448786 TTC13Q8NBP0 860 aa9.24□□□□□ -0.93
AC007879.3-202ENST00000448786 PTGDRQ13258 359 aa9.23□□□□□ -0.93
AC007879.3-202ENST00000448786 NECTIN2Q92692 538 aa9.23□□□□□ -0.93
AC007879.3-202ENST00000448786 C3orf80F5H4A9 247 aa9.22□□□□□ -0.93
AC007879.3-202ENST00000448786 FCHSD2O94868 740 aa9.22□□□□□ -0.93
AC007879.3-202ENST00000448786 ITGBL1O95965 494 aaPredicted RBP9.22□□□□□ -0.93
AC007879.3-202ENST00000448786 KCNC4Q03721 635 aa9.21□□□□□ -0.94
AC007879.3-202ENST00000448786 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
AC007879.3-202ENST00000448786 RBM46Q8TBY0 533 aaKnown RBP9.2□□□□□ -0.94
AC007879.3-202ENST00000448786 A0A0G2JS52 829 aa9.19□□□□□ -0.94
AC007879.3-202ENST00000448786 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
AC007879.3-202ENST00000448786 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
AC007879.3-202ENST00000448786 SWT1Q5T5J6 900 aaKnown RBP9.18□□□□□ -0.94
AC007879.3-202ENST00000448786 EYA1Q99502 592 aa9.18□□□□□ -0.94
AC007879.3-202ENST00000448786 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
AC007879.3-202ENST00000448786 KDM2AQ9Y2K7 1162 aa9.18□□□□□ -0.94
AC007879.3-202ENST00000448786 RGS20O76081 388 aa9.17□□□□□ -0.94
AC007879.3-202ENST00000448786 DNAJB2P25686 324 aa9.15□□□□□ -0.94
AC007879.3-202ENST00000448786 RBM26Q5T8P6 1007 aaKnown RBP9.15□□□□□ -0.94
AC007879.3-202ENST00000448786 ADGRG1Q9Y653 693 aa9.15□□□□□ -0.94
AC007879.3-202ENST00000448786 HIC1Q14526 733 aa9.14□□□□□ -0.95
AC007879.3-202ENST00000448786 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
AC007879.3-202ENST00000448786 OATP04181 439 aa9.12□□□□□ -0.95
AC007879.3-202ENST00000448786 PRR14Q9BWN1 585 aa9.12□□□□□ -0.95
AC007879.3-202ENST00000448786 IL21Q9HBE4 155 aa9.12□□□□□ -0.95
AC007879.3-202ENST00000448786 APLP1P51693 650 aa9.11□□□□□ -0.95
AC007879.3-202ENST00000448786 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
AC007879.3-202ENST00000448786 RCCD1A6NED2 376 aa9.1□□□□□ -0.95
AC007879.3-202ENST00000448786 TJAP1Q5JTD0 557 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms