RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
SP4-204ENST00000448246 EHBP1L1Q8N3D4 1523 aa13.56□□□□□ -0.24
SP4-204ENST00000448246 C9orf84Q5VXU9 1444 aa13.56□□□□□ -0.24
SP4-204ENST00000448246 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
SP4-204ENST00000448246 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
SP4-204ENST00000448246 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
SP4-204ENST00000448246 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
SP4-204ENST00000448246 CDK13Q14004 1512 aaKnown RBP13.55□□□□□ -0.24
SP4-204ENST00000448246 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
SP4-204ENST00000448246 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
SP4-204ENST00000448246 AMPHP49418 695 aa13.53□□□□□ -0.24
SP4-204ENST00000448246 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
SP4-204ENST00000448246 TXNDC2Q86VQ3 553 aa13.52□□□□□ -0.24
SP4-204ENST00000448246 NPHP1O15259 732 aa13.52□□□□□ -0.25
SP4-204ENST00000448246 PANK3Q9H999 370 aa13.52□□□□□ -0.25
SP4-204ENST00000448246 USP47Q96K76 1375 aa13.52□□□□□ -0.25
SP4-204ENST00000448246 NLRP13Q86W25 1043 aa13.5□□□□□ -0.25
SP4-204ENST00000448246 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
SP4-204ENST00000448246 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
SP4-204ENST00000448246 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
SP4-204ENST00000448246 TMEM132EQ6IEE7 984 aa13.5□□□□□ -0.25
SP4-204ENST00000448246 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
SP4-204ENST00000448246 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
SP4-204ENST00000448246 CENPJQ9HC77 1338 aaPredicted RBP13.49□□□□□ -0.25
SP4-204ENST00000448246 THEMISQ8N1K5 641 aaPredicted RBP13.49□□□□□ -0.25
SP4-204ENST00000448246 MSH5O43196 834 aa13.48□□□□□ -0.25
SP4-204ENST00000448246 MS4A1P11836 297 aa13.47□□□□□ -0.25
SP4-204ENST00000448246 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
SP4-204ENST00000448246 COG3Q96JB2 828 aa13.47□□□□□ -0.25
SP4-204ENST00000448246 POGZQ7Z3K3 1410 aa13.46□□□□□ -0.25
SP4-204ENST00000448246 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.25
SP4-204ENST00000448246 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.26
SP4-204ENST00000448246 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.26
SP4-204ENST00000448246 PSME1Q06323 249 aa13.45□□□□□ -0.26
SP4-204ENST00000448246 ATF3P18847 181 aa13.45□□□□□ -0.26
SP4-204ENST00000448246 HFM1A2PYH4 1435 aa13.44□□□□□ -0.26
SP4-204ENST00000448246 DAPK1P53355 1430 aa13.44□□□□□ -0.26
SP4-204ENST00000448246 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
SP4-204ENST00000448246 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
SP4-204ENST00000448246 ADGRL1O94910 1474 aa13.41□□□□□ -0.26
SP4-204ENST00000448246 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
SP4-204ENST00000448246 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
SP4-204ENST00000448246 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
SP4-204ENST00000448246 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
SP4-204ENST00000448246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
SP4-204ENST00000448246 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
SP4-204ENST00000448246 SLC26A8Q96RN1 970 aa13.4□□□□□ -0.26
SP4-204ENST00000448246 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
SP4-204ENST00000448246 KIAA1107Q9UPP5 1409 aa13.4□□□□□ -0.26
SP4-204ENST00000448246 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
SP4-204ENST00000448246 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
SP4-204ENST00000448246 CHMP4AQ9BY43 222 aa13.39□□□□□ -0.27
SP4-204ENST00000448246 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
SP4-204ENST00000448246 EVA1CP58658 441 aa13.38□□□□□ -0.27
SP4-204ENST00000448246 IPO9Q96P70 1041 aaKnown RBP13.38□□□□□ -0.27
SP4-204ENST00000448246 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
SP4-204ENST00000448246 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
SP4-204ENST00000448246 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
SP4-204ENST00000448246 IPO8O15397 1037 aaKnown RBP13.37□□□□□ -0.27
SP4-204ENST00000448246 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
SP4-204ENST00000448246 LMOD3Q0VAK6 560 aa13.37□□□□□ -0.27
SP4-204ENST00000448246 ROCK1Q13464 1354 aa13.36□□□□□ -0.27
SP4-204ENST00000448246 PRAM1Q96QH2 718 aa13.36□□□□□ -0.27
SP4-204ENST00000448246 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
SP4-204ENST00000448246 NAIPQ13075 1403 aa13.35□□□□□ -0.27
SP4-204ENST00000448246 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
SP4-204ENST00000448246 FANCAO15360 1455 aa13.35□□□□□ -0.27
SP4-204ENST00000448246 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
SP4-204ENST00000448246 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
SP4-204ENST00000448246 KIF14Q15058 1648 aa13.34□□□□□ -0.27
SP4-204ENST00000448246 RGS3P49796 1198 aa13.34□□□□□ -0.27
SP4-204ENST00000448246 CAMSAP2Q08AD1 1489 aa13.34□□□□□ -0.27
SP4-204ENST00000448246 ATP10BO94823 1461 aa13.34□□□□□ -0.27
SP4-204ENST00000448246 ABCC5O15440 1437 aa13.33□□□□□ -0.27
SP4-204ENST00000448246 NLRP6P59044 892 aa13.33□□□□□ -0.28
SP4-204ENST00000448246 GGNBP2Q9H3C7 697 aa13.33□□□□□ -0.28
SP4-204ENST00000448246 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
SP4-204ENST00000448246 KIF21AQ7Z4S6 1674 aa13.33□□□□□ -0.28
SP4-204ENST00000448246 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
SP4-204ENST00000448246 ASXL2Q76L83 1435 aa13.32□□□□□ -0.28
SP4-204ENST00000448246 RPGRIP1LQ68CZ1 1315 aa13.32□□□□□ -0.28
SP4-204ENST00000448246 MAP3K1Q13233 1512 aa13.32□□□□□ -0.28
SP4-204ENST00000448246 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
SP4-204ENST00000448246 CEBPAP49715 358 aaPredicted RBP13.32□□□□□ -0.28
SP4-204ENST00000448246 ESCO1Q5FWF5 840 aa13.31□□□□□ -0.28
SP4-204ENST00000448246 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
SP4-204ENST00000448246 NUTM2GQ5VZR2 741 aa13.31□□□□□ -0.28
SP4-204ENST00000448246 ANKRD30BQ9BXX2 1392 aa13.31□□□□□ -0.28
SP4-204ENST00000448246 WDR62O43379 1518 aa13.31□□□□□ -0.28
SP4-204ENST00000448246 NBPF8Q3BBV2 869 aa13.31□□□□□ -0.28
SP4-204ENST00000448246 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
SP4-204ENST00000448246 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
SP4-204ENST00000448246 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
SP4-204ENST00000448246 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
SP4-204ENST00000448246 FBXO31Q5XUX0 539 aaPredicted RBP13.3□□□□□ -0.28
SP4-204ENST00000448246 TEFQ10587 303 aa13.3□□□□□ -0.28
SP4-204ENST00000448246 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
SP4-204ENST00000448246 PMFBP1Q8TBY8 1022 aa13.3□□□□□ -0.28
SP4-204ENST00000448246 WASHC2AQ641Q2 1341 aa13.29□□□□□ -0.28
SP4-204ENST00000448246 MAPKBP1O60336 1514 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms