RNA–Protein interactions for RNA: ENST00000447715.6

PPFIA4-204, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 6,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-204ENST00000447715 IFFO2Q5TF58 517 aa16.6■□□□□ 0.25
PPFIA4-204ENST00000447715 SOGA1O94964 1423 aa16.6■□□□□ 0.25
PPFIA4-204ENST00000447715 STK26Q9P289 416 aa16.59■□□□□ 0.25
PPFIA4-204ENST00000447715 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
PPFIA4-204ENST00000447715 RAD21O60216 631 aa16.59■□□□□ 0.25
PPFIA4-204ENST00000447715 TPM2P07951 284 aa16.58■□□□□ 0.25
PPFIA4-204ENST00000447715 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
PPFIA4-204ENST00000447715 BECN2A8MW95 431 aa16.57■□□□□ 0.24
PPFIA4-204ENST00000447715 TPM1P09493 284 aa16.56■□□□□ 0.24
PPFIA4-204ENST00000447715 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
PPFIA4-204ENST00000447715 TCERG1O14776 1098 aaKnown RBP16.56■□□□□ 0.24
PPFIA4-204ENST00000447715 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
PPFIA4-204ENST00000447715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.56■□□□□ 0.247e-7■■■■■ 73.2
PPFIA4-204ENST00000447715 U2AF1L5P0DN76 240 aaPredicted RBP16.55■□□□□ 0.24
PPFIA4-204ENST00000447715 U2AF1Q01081 240 aaKnown RBP eCLIP16.55■□□□□ 0.24
PPFIA4-204ENST00000447715 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
PPFIA4-204ENST00000447715 TCEAL9Q9UHQ7 104 aa16.54■□□□□ 0.24
PPFIA4-204ENST00000447715 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
PPFIA4-204ENST00000447715 RCAN3Q9UKA8 241 aa16.54■□□□□ 0.24
PPFIA4-204ENST00000447715 STK31Q9BXU1 1019 aa16.53■□□□□ 0.24
PPFIA4-204ENST00000447715 FAM13BQ9NYF5 915 aa16.53■□□□□ 0.24
PPFIA4-204ENST00000447715 MCTP1Q6DN14 999 aa16.53■□□□□ 0.24
PPFIA4-204ENST00000447715 FAM184AQ8NB25 1140 aa16.53■□□□□ 0.24
PPFIA4-204ENST00000447715 TEX35Q5T0J7 233 aa16.52■□□□□ 0.24
PPFIA4-204ENST00000447715 FBXW7Q969H0 707 aa16.52■□□□□ 0.24
PPFIA4-204ENST00000447715 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
PPFIA4-204ENST00000447715 PLCD4Q9BRC7 762 aa16.52■□□□□ 0.24
PPFIA4-204ENST00000447715 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
PPFIA4-204ENST00000447715 MAP7D2Q96T17 732 aa16.52■□□□□ 0.23
PPFIA4-204ENST00000447715 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
PPFIA4-204ENST00000447715 KANK1Q14678 1352 aa16.51■□□□□ 0.23
PPFIA4-204ENST00000447715 ST18O60284 1047 aa16.51■□□□□ 0.23
PPFIA4-204ENST00000447715 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
PPFIA4-204ENST00000447715 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
PPFIA4-204ENST00000447715 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
PPFIA4-204ENST00000447715 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
PPFIA4-204ENST00000447715 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
PPFIA4-204ENST00000447715 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-204ENST00000447715 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
PPFIA4-204ENST00000447715 NAP1L1P55209 391 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-204ENST00000447715 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
PPFIA4-204ENST00000447715 RUFY1Q96T51 708 aa16.49■□□□□ 0.23
PPFIA4-204ENST00000447715 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-204ENST00000447715 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-204ENST00000447715 SKIDA1Q1XH10 827 aa16.48■□□□□ 0.23
PPFIA4-204ENST00000447715 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
PPFIA4-204ENST00000447715 HMMRO75330 724 aa16.48■□□□□ 0.23
PPFIA4-204ENST00000447715 IPO7O95373 1038 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-204ENST00000447715 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
PPFIA4-204ENST00000447715 APPP05067 770 aa16.47■□□□□ 0.23
PPFIA4-204ENST00000447715 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
PPFIA4-204ENST00000447715 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.23
PPFIA4-204ENST00000447715 CTDP1Q9Y5B0 961 aaPredicted RBP16.45■□□□□ 0.22
PPFIA4-204ENST00000447715 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
PPFIA4-204ENST00000447715 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
PPFIA4-204ENST00000447715 AK7Q96M32 723 aa16.44■□□□□ 0.22
PPFIA4-204ENST00000447715 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
PPFIA4-204ENST00000447715 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
PPFIA4-204ENST00000447715 DHX37Q8IY37 1157 aaKnown RBP16.43■□□□□ 0.22
PPFIA4-204ENST00000447715 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
PPFIA4-204ENST00000447715 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
PPFIA4-204ENST00000447715 NOM1Q5C9Z4 860 aaKnown RBP16.42■□□□□ 0.22
PPFIA4-204ENST00000447715 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
PPFIA4-204ENST00000447715 FOSBP53539 338 aa16.42■□□□□ 0.22
PPFIA4-204ENST00000447715 ZFYVE27Q5T4F4 411 aa16.41■□□□□ 0.22
PPFIA4-204ENST00000447715 LTV1Q96GA3 475 aaPredicted RBP16.41■□□□□ 0.22
PPFIA4-204ENST00000447715 ODF2Q5BJF6 829 aa16.41■□□□□ 0.22
PPFIA4-204ENST00000447715 SYNE3Q6ZMZ3 975 aa16.41■□□□□ 0.22
PPFIA4-204ENST00000447715 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.4■□□□□ 0.22
PPFIA4-204ENST00000447715 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
PPFIA4-204ENST00000447715 CCDC191Q8NCU4 936 aa16.4■□□□□ 0.22
PPFIA4-204ENST00000447715 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
PPFIA4-204ENST00000447715 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
PPFIA4-204ENST00000447715 H0YHG0 523 aa16.4■□□□□ 0.22
PPFIA4-204ENST00000447715 CDR1P51861 262 aa16.4■□□□□ 0.22
PPFIA4-204ENST00000447715 FMN1Q68DA7 1419 aa16.39■□□□□ 0.21
PPFIA4-204ENST00000447715 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
PPFIA4-204ENST00000447715 ANKRD20A12PQ8NF67 263 aa16.39■□□□□ 0.21
PPFIA4-204ENST00000447715 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.21
PPFIA4-204ENST00000447715 TRIM29Q14134 588 aa16.38■□□□□ 0.21
PPFIA4-204ENST00000447715 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
PPFIA4-204ENST00000447715 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
PPFIA4-204ENST00000447715 MSH5O43196 834 aa16.37■□□□□ 0.21
PPFIA4-204ENST00000447715 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
PPFIA4-204ENST00000447715 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
PPFIA4-204ENST00000447715 TTLL5Q6EMB2 1281 aa16.37■□□□□ 0.21
PPFIA4-204ENST00000447715 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
PPFIA4-204ENST00000447715 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
PPFIA4-204ENST00000447715 BICD2Q8TD16 824 aa16.36■□□□□ 0.21
PPFIA4-204ENST00000447715 TSHZ2Q9NRE2 1034 aa16.36■□□□□ 0.21
PPFIA4-204ENST00000447715 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
PPFIA4-204ENST00000447715 CCDC43Q96MW1 224 aaKnown RBP16.36■□□□□ 0.21
PPFIA4-204ENST00000447715 RDXP35241 583 aaKnown RBP16.35■□□□□ 0.21
PPFIA4-204ENST00000447715 GSE1Q14687 1217 aa16.35■□□□□ 0.21
PPFIA4-204ENST00000447715 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
PPFIA4-204ENST00000447715 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
PPFIA4-204ENST00000447715 ANKRD45Q5TZF3 282 aa16.35■□□□□ 0.21
PPFIA4-204ENST00000447715 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
PPFIA4-204ENST00000447715 ATP6V1DQ9Y5K8 247 aa16.35■□□□□ 0.21
PPFIA4-204ENST00000447715 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms