RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 CGNL1Q0VF96 1302 aa22.52■■□□□ 1.19
ATG9A-215ENST00000446716 ZNF644Q9H582 1327 aaPredicted RBP22.51■■□□□ 1.19
ATG9A-215ENST00000446716 G3V3G9 751 aa22.5■■□□□ 1.19
ATG9A-215ENST00000446716 PSME1Q06323 249 aa22.5■■□□□ 1.19
ATG9A-215ENST00000446716 C1orf141Q5JVX7 400 aa22.5■■□□□ 1.19
ATG9A-215ENST00000446716 DCAF8Q5TAQ9 597 aa22.5■■□□□ 1.19
ATG9A-215ENST00000446716 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
ATG9A-215ENST00000446716 HMMRO75330 724 aa22.48■■□□□ 1.19
ATG9A-215ENST00000446716 PLCB2Q00722 1185 aa22.48■■□□□ 1.19
ATG9A-215ENST00000446716 CLUAP1Q96AJ1 413 aa22.46■■□□□ 1.19
ATG9A-215ENST00000446716 PHLDB1Q86UU1 1377 aa22.45■■□□□ 1.18
ATG9A-215ENST00000446716 TEFQ10587 303 aa22.45■■□□□ 1.18
ATG9A-215ENST00000446716 AFAP1Q8N556 730 aa22.44■■□□□ 1.18
ATG9A-215ENST00000446716 PRG4Q92954 1404 aaPredicted RBP22.44■■□□□ 1.18
ATG9A-215ENST00000446716 RRP7AQ9Y3A4 280 aaKnown RBP22.44■■□□□ 1.18
ATG9A-215ENST00000446716 ATF3P18847 181 aa22.44■■□□□ 1.18
ATG9A-215ENST00000446716 GPATCH3Q96I76 525 aa22.44■■□□□ 1.18
ATG9A-215ENST00000446716 GNL2Q13823 731 aaKnown RBP22.44■■□□□ 1.18
ATG9A-215ENST00000446716 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
ATG9A-215ENST00000446716 MEX3CQ5U5Q3 659 aaKnown RBP22.43■■□□□ 1.18
ATG9A-215ENST00000446716 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
ATG9A-215ENST00000446716 NESP48681 1621 aa22.41■■□□□ 1.18
ATG9A-215ENST00000446716 FRAT2O75474 233 aaPredicted RBP22.4■■□□□ 1.18
ATG9A-215ENST00000446716 MYBBP1AQ9BQG0 1328 aaKnown RBP22.4■■□□□ 1.18
ATG9A-215ENST00000446716 USP47Q96K76 1375 aa22.4■■□□□ 1.18
ATG9A-215ENST00000446716 MSH5O43196 834 aa22.39■■□□□ 1.18
ATG9A-215ENST00000446716 PMFBP1Q8TBY8 1022 aa22.39■■□□□ 1.18
ATG9A-215ENST00000446716 DHX57Q6P158 1386 aaKnown RBP22.39■■□□□ 1.17
ATG9A-215ENST00000446716 ELL2O00472 640 aaPredicted RBP22.38■■□□□ 1.17
ATG9A-215ENST00000446716 PDE3BQ13370 1112 aa22.38■■□□□ 1.17
ATG9A-215ENST00000446716 TTC5Q8N0Z6 440 aa22.38■■□□□ 1.17
ATG9A-215ENST00000446716 FGD6Q6ZV73 1430 aa22.37■■□□□ 1.17
ATG9A-215ENST00000446716 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
ATG9A-215ENST00000446716 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
ATG9A-215ENST00000446716 TRIM6-TRIM34B2RNG4 842 aa22.36■■□□□ 1.17
ATG9A-215ENST00000446716 CFTRP13569 1480 aa22.36■■□□□ 1.17
ATG9A-215ENST00000446716 STAC3Q96MF2 364 aa22.36■■□□□ 1.17
ATG9A-215ENST00000446716 CLSTN1O94985 981 aa22.35■■□□□ 1.17
ATG9A-215ENST00000446716 IFT140Q96RY7 1462 aa22.35■■□□□ 1.17
ATG9A-215ENST00000446716 GOLGA6L6A8MZA4 724 aa22.34■■□□□ 1.17
ATG9A-215ENST00000446716 SYTL4Q96C24 671 aaPredicted RBP22.34■■□□□ 1.17
ATG9A-215ENST00000446716 ANKRD50Q9ULJ7 1429 aa22.34■■□□□ 1.17
ATG9A-215ENST00000446716 DNTTIP2Q5QJE6 756 aaKnown RBP22.34■■□□□ 1.17
ATG9A-215ENST00000446716 SPRYD3Q8NCJ5 442 aa22.34■■□□□ 1.17
ATG9A-215ENST00000446716 ARHGAP5Q13017 1502 aa22.33■■□□□ 1.17
ATG9A-215ENST00000446716 CUX1P39880 1505 aa22.32■■□□□ 1.16
ATG9A-215ENST00000446716 NRDCO43847 1150 aa22.32■■□□□ 1.16
ATG9A-215ENST00000446716 DIAPH1O60610 1272 aaKnown RBP22.32■■□□□ 1.16
ATG9A-215ENST00000446716 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
ATG9A-215ENST00000446716 TXNDC2Q86VQ3 553 aa22.29■■□□□ 1.16
ATG9A-215ENST00000446716 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
ATG9A-215ENST00000446716 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
ATG9A-215ENST00000446716 ERICH6BQ5W0A0 696 aa22.28■■□□□ 1.16
ATG9A-215ENST00000446716 CASKIN1Q8WXD9 1431 aa22.28■■□□□ 1.16
ATG9A-215ENST00000446716 NEXNQ0ZGT2 675 aa22.27■■□□□ 1.16
ATG9A-215ENST00000446716 EIF2S2P20042 333 aaKnown RBP22.27■■□□□ 1.16
ATG9A-215ENST00000446716 TMEM132EQ6IEE7 984 aa22.27■■□□□ 1.16
ATG9A-215ENST00000446716 RAPGEF4Q8WZA2 1011 aa22.26■■□□□ 1.15
ATG9A-215ENST00000446716 TOMM22Q9NS69 142 aa22.25■■□□□ 1.15
ATG9A-215ENST00000446716 BCL2L13Q9BXK5 485 aa22.25■■□□□ 1.15
ATG9A-215ENST00000446716 NCOA2Q15596 1464 aa22.24■■□□□ 1.15
ATG9A-215ENST00000446716 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
ATG9A-215ENST00000446716 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
ATG9A-215ENST00000446716 NLRP2Q9NX02 1062 aa22.23■■□□□ 1.15
ATG9A-215ENST00000446716 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
ATG9A-215ENST00000446716 NUTM2GQ5VZR2 741 aa22.22■■□□□ 1.15
ATG9A-215ENST00000446716 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
ATG9A-215ENST00000446716 E9PSI1 815 aa22.22■■□□□ 1.15
ATG9A-215ENST00000446716 NLRP6P59044 892 aa22.22■■□□□ 1.15
ATG9A-215ENST00000446716 APAF1O14727 1248 aa22.21■■□□□ 1.15
ATG9A-215ENST00000446716 HSP90B1P14625 803 aaKnown RBP22.21■■□□□ 1.15
ATG9A-215ENST00000446716 MFAP1P55081 439 aaKnown RBP22.21■■□□□ 1.15
ATG9A-215ENST00000446716 THEMISQ8N1K5 641 aaPredicted RBP22.21■■□□□ 1.15
ATG9A-215ENST00000446716 CABP2Q9NPB3 220 aa22.21■■□□□ 1.15
ATG9A-215ENST00000446716 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
ATG9A-215ENST00000446716 TCERG1O14776 1098 aaKnown RBP22.2■■□□□ 1.14
ATG9A-215ENST00000446716 MIA2Q96PC5 1412 aa22.19■■□□□ 1.14
ATG9A-215ENST00000446716 C9orf78Q9NZ63 289 aaPredicted RBP22.19■■□□□ 1.14
ATG9A-215ENST00000446716 RIPK4P57078 832 aa22.19■■□□□ 1.14
ATG9A-215ENST00000446716 SNAPC4Q5SXM2 1469 aa22.19■■□□□ 1.14
ATG9A-215ENST00000446716 ZKSCAN2Q63HK3 967 aa22.18■■□□□ 1.14
ATG9A-215ENST00000446716 GGNBP2Q9H3C7 697 aa22.18■■□□□ 1.14
ATG9A-215ENST00000446716 HTATSF1O43719 755 aaKnown RBP22.18■■□□□ 1.14
ATG9A-215ENST00000446716 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
ATG9A-215ENST00000446716 KIF21BO75037 1637 aa22.17■■□□□ 1.14
ATG9A-215ENST00000446716 GPRASP1Q5JY77 1395 aa22.17■■□□□ 1.14
ATG9A-215ENST00000446716 NECTIN2Q92692 538 aa22.17■■□□□ 1.14
ATG9A-215ENST00000446716 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
ATG9A-215ENST00000446716 ESCO1Q5FWF5 840 aa22.16■■□□□ 1.14
ATG9A-215ENST00000446716 CFAP70Q5T0N1 1121 aa22.16■■□□□ 1.14
ATG9A-215ENST00000446716 DDX58O95786 925 aaKnown RBP22.16■■□□□ 1.14
ATG9A-215ENST00000446716 POLA1P09884 1462 aaPredicted RBP22.16■■□□□ 1.14
ATG9A-215ENST00000446716 GLIPR1L2Q4G1C9 344 aa22.14■■□□□ 1.13
ATG9A-215ENST00000446716 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
ATG9A-215ENST00000446716 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
ATG9A-215ENST00000446716 HMOX1P09601 288 aa22.12■■□□□ 1.13
ATG9A-215ENST00000446716 ABTB2Q8N961 1025 aa22.12■■□□□ 1.13
ATG9A-215ENST00000446716 GBP4Q96PP9 640 aa22.12■■□□□ 1.13
ATG9A-215ENST00000446716 RRBP1Q9P2E9 1410 aaKnown RBP22.11■■□□□ 1.13
ATG9A-215ENST00000446716 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms