RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ARID4BQ4LE39 1312 aaPredicted RBP18.92■□□□□ 0.62
ERCC3-203ENST00000445889 NLRP13Q86W25 1043 aa18.91■□□□□ 0.62
ERCC3-203ENST00000445889 BRD4O60885 1362 aaPredicted RBP18.9■□□□□ 0.62
ERCC3-203ENST00000445889 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
ERCC3-203ENST00000445889 C9orf84Q5VXU9 1444 aa18.9■□□□□ 0.62
ERCC3-203ENST00000445889 PANK3Q9H999 370 aa18.9■□□□□ 0.62
ERCC3-203ENST00000445889 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
ERCC3-203ENST00000445889 C20orf194Q5TEA3 1177 aa18.89■□□□□ 0.61
ERCC3-203ENST00000445889 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
ERCC3-203ENST00000445889 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
ERCC3-203ENST00000445889 PER1O15534 1290 aaPredicted RBP18.88■□□□□ 0.61
ERCC3-203ENST00000445889 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
ERCC3-203ENST00000445889 KTN1Q86UP2 1357 aaKnown RBP18.87■□□□□ 0.61
ERCC3-203ENST00000445889 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
ERCC3-203ENST00000445889 NEFMP07197 916 aa18.86■□□□□ 0.61
ERCC3-203ENST00000445889 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
ERCC3-203ENST00000445889 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
ERCC3-203ENST00000445889 BACH2Q9BYV9 841 aa18.84■□□□□ 0.61
ERCC3-203ENST00000445889 ADGRL2O95490 1459 aa18.83■□□□□ 0.6
ERCC3-203ENST00000445889 IL27Q8NEV9 243 aa18.82■□□□□ 0.6
ERCC3-203ENST00000445889 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
ERCC3-203ENST00000445889 DISP3Q9P2K9 1392 aa18.82■□□□□ 0.6
ERCC3-203ENST00000445889 ADAMTS8Q9UP79 889 aa18.81■□□□□ 0.6
ERCC3-203ENST00000445889 PARD3Q8TEW0 1356 aa18.79■□□□□ 0.6
ERCC3-203ENST00000445889 TESK2Q96S53 571 aa18.79■□□□□ 0.6
ERCC3-203ENST00000445889 ATP10BO94823 1461 aa18.78■□□□□ 0.6
ERCC3-203ENST00000445889 CCDC144AA2RUR9 1427 aa18.77■□□□□ 0.6
ERCC3-203ENST00000445889 CARMIL2Q6F5E8 1435 aa18.76■□□□□ 0.59
ERCC3-203ENST00000445889 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
ERCC3-203ENST00000445889 ADGBQ8N7X0 1667 aa18.75■□□□□ 0.59
ERCC3-203ENST00000445889 MAGI1Q96QZ7 1491 aaPredicted RBP18.75■□□□□ 0.59
ERCC3-203ENST00000445889 CEP170Q5SW79 1584 aa18.75■□□□□ 0.59
ERCC3-203ENST00000445889 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
ERCC3-203ENST00000445889 CCDC146Q8IYE0 955 aa18.73■□□□□ 0.59
ERCC3-203ENST00000445889 ITSN2Q9NZM3 1697 aa18.72■□□□□ 0.59
ERCC3-203ENST00000445889 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
ERCC3-203ENST00000445889 RGS3P49796 1198 aa18.71■□□□□ 0.59
ERCC3-203ENST00000445889 TMF1P82094 1093 aa18.71■□□□□ 0.59
ERCC3-203ENST00000445889 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
ERCC3-203ENST00000445889 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
ERCC3-203ENST00000445889 ANO8Q9HCE9 1232 aaPredicted RBP18.69■□□□□ 0.58
ERCC3-203ENST00000445889 MS4A1P11836 297 aa18.69■□□□□ 0.58
ERCC3-203ENST00000445889 PLA2R1Q13018 1463 aa18.69■□□□□ 0.58
ERCC3-203ENST00000445889 FAM135AQ9P2D6 1515 aa18.68■□□□□ 0.58
ERCC3-203ENST00000445889 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
ERCC3-203ENST00000445889 CROCC2H7BZ55 1655 aa18.67■□□□□ 0.58
ERCC3-203ENST00000445889 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
ERCC3-203ENST00000445889 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
ERCC3-203ENST00000445889 PLEKHH1Q9ULM0 1364 aa18.67■□□□□ 0.58
ERCC3-203ENST00000445889 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
ERCC3-203ENST00000445889 A2MP01023 1474 aa18.66■□□□□ 0.58
ERCC3-203ENST00000445889 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
ERCC3-203ENST00000445889 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
ERCC3-203ENST00000445889 PTPRGP23470 1445 aa18.65■□□□□ 0.58
ERCC3-203ENST00000445889 ERBINQ96RT1 1412 aa18.65■□□□□ 0.58
ERCC3-203ENST00000445889 KDM5DQ9BY66 1539 aa18.65■□□□□ 0.58
ERCC3-203ENST00000445889 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
ERCC3-203ENST00000445889 DUSP27Q5VZP5 1158 aa18.64■□□□□ 0.58
ERCC3-203ENST00000445889 PLEKHH2Q8IVE3 1493 aa18.63■□□□□ 0.57
ERCC3-203ENST00000445889 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
ERCC3-203ENST00000445889 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
ERCC3-203ENST00000445889 BCAR3O75815 825 aa18.61■□□□□ 0.57
ERCC3-203ENST00000445889 DAXXQ9UER7 740 aaPredicted RBP18.61■□□□□ 0.57
ERCC3-203ENST00000445889 E9PCH4 1651 aa18.61■□□□□ 0.57
ERCC3-203ENST00000445889 COL17A1Q9UMD9 1497 aaPredicted RBP18.6■□□□□ 0.57
ERCC3-203ENST00000445889 APAF1O14727 1248 aa18.6■□□□□ 0.57
ERCC3-203ENST00000445889 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
ERCC3-203ENST00000445889 USP35Q9P2H5 1018 aa18.6■□□□□ 0.57
ERCC3-203ENST00000445889 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
ERCC3-203ENST00000445889 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
ERCC3-203ENST00000445889 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
ERCC3-203ENST00000445889 BRPF3Q9ULD4 1205 aa18.59■□□□□ 0.57
ERCC3-203ENST00000445889 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.57
ERCC3-203ENST00000445889 BLMP54132 1417 aaPredicted RBP18.58■□□□□ 0.56
ERCC3-203ENST00000445889 AMER1Q5JTC6 1135 aaPredicted RBP18.58■□□□□ 0.56
ERCC3-203ENST00000445889 KDM2BQ8NHM5 1336 aa18.58■□□□□ 0.56
ERCC3-203ENST00000445889 ABCA8O94911 1581 aa18.58■□□□□ 0.56
ERCC3-203ENST00000445889 MAGI2Q86UL8 1455 aa18.57■□□□□ 0.56
ERCC3-203ENST00000445889 DDRGK1Q96HY6 314 aa18.57■□□□□ 0.56
ERCC3-203ENST00000445889 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
ERCC3-203ENST00000445889 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
ERCC3-203ENST00000445889 NUP160Q12769 1436 aa18.56■□□□□ 0.56
ERCC3-203ENST00000445889 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
ERCC3-203ENST00000445889 NEUROD2Q15784 382 aa18.56■□□□□ 0.56
ERCC3-203ENST00000445889 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
ERCC3-203ENST00000445889 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
ERCC3-203ENST00000445889 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
ERCC3-203ENST00000445889 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
ERCC3-203ENST00000445889 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
ERCC3-203ENST00000445889 CENPQQ7L2Z9 268 aaPredicted RBP18.54■□□□□ 0.56
ERCC3-203ENST00000445889 RSPH4AQ5TD94 716 aa18.54■□□□□ 0.56
ERCC3-203ENST00000445889 FAM161AQ3B820 660 aa18.53■□□□□ 0.56
ERCC3-203ENST00000445889 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.56
ERCC3-203ENST00000445889 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
ERCC3-203ENST00000445889 AFAP1Q8N556 730 aa18.52■□□□□ 0.55
ERCC3-203ENST00000445889 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.55
ERCC3-203ENST00000445889 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
ERCC3-203ENST00000445889 IGHDP01880 384 aa18.51■□□□□ 0.55
ERCC3-203ENST00000445889 GSE1Q14687 1217 aa18.5■□□□□ 0.55
ERCC3-203ENST00000445889 ZMYM4Q5VZL5 1548 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms