RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 CLASP1Q7Z460 1538 aa8.31□□□□□ -1.08
C2CD3-207ENST00000442398 MYO5CQ9NQX4 1742 aa8.31□□□□□ -1.08
C2CD3-207ENST00000442398 KIF3BO15066 747 aa8.31□□□□□ -1.08
C2CD3-207ENST00000442398 USP47Q96K76 1375 aa8.31□□□□□ -1.08
C2CD3-207ENST00000442398 GGT6Q6P531 493 aa8.3□□□□□ -1.08
C2CD3-207ENST00000442398 MAGI2Q86UL8 1455 aa8.3□□□□□ -1.08
C2CD3-207ENST00000442398 UHRF1BP1Q6BDS2 1440 aa8.3□□□□□ -1.08
C2CD3-207ENST00000442398 SPAG9O60271 1321 aaKnown RBP8.3□□□□□ -1.08
C2CD3-207ENST00000442398 ATP10BO94823 1461 aa8.3□□□□□ -1.08
C2CD3-207ENST00000442398 IQGAP3Q86VI3 1631 aa8.3□□□□□ -1.08
C2CD3-207ENST00000442398 C9orf84Q5VXU9 1444 aa8.29□□□□□ -1.08
C2CD3-207ENST00000442398 CCDC7Q96M83 1385 aa8.29□□□□□ -1.08
C2CD3-207ENST00000442398 RSPH4AQ5TD94 716 aa8.29□□□□□ -1.08
C2CD3-207ENST00000442398 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
C2CD3-207ENST00000442398 PLPPR3Q6T4P5 718 aa8.28□□□□□ -1.08
C2CD3-207ENST00000442398 CCDC144AA2RUR9 1427 aa8.27□□□□□ -1.08
C2CD3-207ENST00000442398 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
C2CD3-207ENST00000442398 TTC37Q6PGP7 1564 aa8.27□□□□□ -1.09
C2CD3-207ENST00000442398 UHRF1BP1LA0JNW5 1464 aa8.27□□□□□ -1.09
C2CD3-207ENST00000442398 ABCC2Q92887 1545 aa8.27□□□□□ -1.09
C2CD3-207ENST00000442398 BCORL1Q5H9F3 1711 aa8.27□□□□□ -1.09
C2CD3-207ENST00000442398 NBPF1Q3BBV0 1214 aa8.27□□□□□ -1.09
C2CD3-207ENST00000442398 ARHGAP5Q13017 1502 aa8.27□□□□□ -1.09
C2CD3-207ENST00000442398 CNTLNQ9NXG0 1405 aa8.26□□□□□ -1.09
C2CD3-207ENST00000442398 KIAA1107Q9UPP5 1409 aa8.26□□□□□ -1.09
C2CD3-207ENST00000442398 RNF17Q9BXT8 1623 aaKnown RBP8.26□□□□□ -1.09
C2CD3-207ENST00000442398 TRPM1Q7Z4N2 1603 aa8.26□□□□□ -1.09
C2CD3-207ENST00000442398 NUTM2DQ5VT03 806 aaPredicted RBP8.26□□□□□ -1.09
C2CD3-207ENST00000442398 STAG3Q9UJ98 1225 aa8.26□□□□□ -1.09
C2CD3-207ENST00000442398 DEPDC5O75140 1603 aa8.26□□□□□ -1.09
C2CD3-207ENST00000442398 RALGAPBQ86X10 1494 aa8.26□□□□□ -1.09
C2CD3-207ENST00000442398 CCDC136Q96JN2 1154 aa8.26□□□□□ -1.09
C2CD3-207ENST00000442398 KNSTRNQ9Y448 316 aa8.25□□□□□ -1.09
C2CD3-207ENST00000442398 NEURL4Q96JN8 1562 aa8.25□□□□□ -1.09
C2CD3-207ENST00000442398 TMF1P82094 1093 aa8.25□□□□□ -1.09
C2CD3-207ENST00000442398 TNNT2P45379 298 aaPredicted RBP8.25□□□□□ -1.09
C2CD3-207ENST00000442398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.25□□□□□ -1.09
C2CD3-207ENST00000442398 EIF5BO60841 1220 aaKnown RBP8.24□□□□□ -1.09
C2CD3-207ENST00000442398 ZCCHC11Q5TAX3 1644 aaKnown RBP8.24□□□□□ -1.09
C2CD3-207ENST00000442398 WDR43Q15061 677 aaKnown RBP eCLIP8.24□□□□□ -1.09
C2CD3-207ENST00000442398 ATP10AO60312 1499 aa8.23□□□□□ -1.09
C2CD3-207ENST00000442398 CCDC141Q6ZP82 1450 aa8.23□□□□□ -1.09
C2CD3-207ENST00000442398 PLEKHG5O94827 1062 aa8.23□□□□□ -1.09
C2CD3-207ENST00000442398 SAFB2Q14151 953 aaKnown RBP eCLIP8.23□□□□□ -1.09
C2CD3-207ENST00000442398 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
C2CD3-207ENST00000442398 KANK1Q14678 1352 aa8.22□□□□□ -1.09
C2CD3-207ENST00000442398 PANK3Q9H999 370 aa8.22□□□□□ -1.09
C2CD3-207ENST00000442398 OSCARQ8IYS5 282 aa8.21□□□□□ -1.09
C2CD3-207ENST00000442398 DNAJC5Q9H3Z4 198 aa8.21□□□□□ -1.09
C2CD3-207ENST00000442398 EIF2AK4Q9P2K8 1649 aaKnown RBP8.21□□□□□ -1.09
C2CD3-207ENST00000442398 ABCC1P33527 1531 aa8.21□□□□□ -1.09
C2CD3-207ENST00000442398 PLEKHH2Q8IVE3 1493 aa8.21□□□□□ -1.09
C2CD3-207ENST00000442398 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.1
C2CD3-207ENST00000442398 FAM135AQ9P2D6 1515 aa8.21□□□□□ -1.1
C2CD3-207ENST00000442398 MLECQ14165 292 aa8.21□□□□□ -1.1
C2CD3-207ENST00000442398 CYB5RLQ6IPT4 315 aa8.21□□□□□ -1.1
C2CD3-207ENST00000442398 CEP152O94986 1710 aa8.2□□□□□ -1.1
C2CD3-207ENST00000442398 NPM2Q86SE8 214 aaKnown RBP8.2□□□□□ -1.1
C2CD3-207ENST00000442398 NEUROD2Q15784 382 aa8.2□□□□□ -1.1
C2CD3-207ENST00000442398 PPP4R2Q9NY27 417 aa8.2□□□□□ -1.1
C2CD3-207ENST00000442398 KTN1Q86UP2 1357 aaKnown RBP8.2□□□□□ -1.1
C2CD3-207ENST00000442398 INO80Q9ULG1 1556 aaPredicted RBP8.19□□□□□ -1.1
C2CD3-207ENST00000442398 ARID4BQ4LE39 1312 aaPredicted RBP8.19□□□□□ -1.1
C2CD3-207ENST00000442398 VWDEQ8N2E2 1590 aa8.19□□□□□ -1.1
C2CD3-207ENST00000442398 ESF1Q9H501 851 aaKnown RBP8.19□□□□□ -1.1
C2CD3-207ENST00000442398 PRDM15P57071 1507 aaPredicted RBP8.19□□□□□ -1.1
C2CD3-207ENST00000442398 SYCP2Q9BX26 1530 aa8.19□□□□□ -1.1
C2CD3-207ENST00000442398 DUOX2Q9NRD8 1548 aa8.19□□□□□ -1.1
C2CD3-207ENST00000442398 STK26Q9P289 416 aa8.19□□□□□ -1.1
C2CD3-207ENST00000442398 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
C2CD3-207ENST00000442398 SPHKAPQ2M3C7 1700 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 KIAA1210Q9ULL0 1709 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 RALBP1Q15311 655 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 CDCA8Q53HL2 280 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 WASHC2CQ9Y4E1 1318 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 ERCC6L2Q5T890 1561 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 WDR7Q9Y4E6 1490 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 ERBINQ96RT1 1412 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 SCAPERQ9BY12 1400 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
C2CD3-207ENST00000442398 RBM19Q9Y4C8 960 aaKnown RBP8.18□□□□□ -1.1
C2CD3-207ENST00000442398 IQGAP1P46940 1657 aa8.17□□□□□ -1.1
C2CD3-207ENST00000442398 ZMYM4Q5VZL5 1548 aa8.17□□□□□ -1.1
C2CD3-207ENST00000442398 IFT172Q9UG01 1749 aa8.17□□□□□ -1.1
C2CD3-207ENST00000442398 NLRP13Q86W25 1043 aa8.17□□□□□ -1.1
C2CD3-207ENST00000442398 ZBED9Q6R2W3 1325 aa8.16□□□□□ -1.1
C2CD3-207ENST00000442398 MYBBP1AQ9BQG0 1328 aaKnown RBP8.16□□□□□ -1.1
C2CD3-207ENST00000442398 DHX29Q7Z478 1369 aaKnown RBP8.16□□□□□ -1.1
C2CD3-207ENST00000442398 ZFYVE16Q7Z3T8 1539 aa8.16□□□□□ -1.1
C2CD3-207ENST00000442398 CFAP70Q5T0N1 1121 aa8.15□□□□□ -1.1
C2CD3-207ENST00000442398 NUDCQ9Y266 331 aa8.15□□□□□ -1.1
C2CD3-207ENST00000442398 TET3O43151 1660 aa8.15□□□□□ -1.1
C2CD3-207ENST00000442398 RAPGEF3O95398 923 aa8.15□□□□□ -1.11
C2CD3-207ENST00000442398 CCDC146Q8IYE0 955 aa8.15□□□□□ -1.11
C2CD3-207ENST00000442398 GPRASP1Q5JY77 1395 aa8.15□□□□□ -1.11
C2CD3-207ENST00000442398 MADDQ8WXG6 1647 aa8.14□□□□□ -1.11
C2CD3-207ENST00000442398 TMEM132EQ6IEE7 984 aa8.14□□□□□ -1.11
C2CD3-207ENST00000442398 TRPM2O94759 1503 aa8.13□□□□□ -1.11
C2CD3-207ENST00000442398 PPM1GO15355 546 aaPredicted RBP8.13□□□□□ -1.11
C2CD3-207ENST00000442398 PLA2R1Q13018 1463 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms