RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 KTN1Q86UP2 1357 aaKnown RBP22.29■■□□□ 1.16
SEMA3B-207ENST00000441915 FAM135AQ9P2D6 1515 aa22.29■■□□□ 1.16
SEMA3B-207ENST00000441915 SAMD9LQ8IVG5 1584 aa22.28■■□□□ 1.16
SEMA3B-207ENST00000441915 PREX2Q70Z35 1606 aa22.27■■□□□ 1.16
SEMA3B-207ENST00000441915 RALBP1Q15311 655 aa22.27■■□□□ 1.16
SEMA3B-207ENST00000441915 RNF123Q5XPI4 1314 aa22.27■■□□□ 1.16
SEMA3B-207ENST00000441915 CDC42BPBQ9Y5S2 1711 aa22.27■■□□□ 1.16
SEMA3B-207ENST00000441915 MYBBP1AQ9BQG0 1328 aaKnown RBP22.26■■□□□ 1.15
SEMA3B-207ENST00000441915 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
SEMA3B-207ENST00000441915 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
SEMA3B-207ENST00000441915 PRKCSHP14314 528 aaPredicted RBP22.24■■□□□ 1.15
SEMA3B-207ENST00000441915 ERICH6Q7L0X2 663 aa22.24■■□□□ 1.15
SEMA3B-207ENST00000441915 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
SEMA3B-207ENST00000441915 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
SEMA3B-207ENST00000441915 E9PCH4 1651 aa22.21■■□□□ 1.15
SEMA3B-207ENST00000441915 SYCP2Q9BX26 1530 aa22.19■■□□□ 1.14
SEMA3B-207ENST00000441915 CCDC136Q96JN2 1154 aa22.19■■□□□ 1.14
SEMA3B-207ENST00000441915 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
SEMA3B-207ENST00000441915 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
SEMA3B-207ENST00000441915 RGL3Q3MIN7 710 aa22.17■■□□□ 1.14
SEMA3B-207ENST00000441915 ARHGAP5Q13017 1502 aa22.17■■□□□ 1.14
SEMA3B-207ENST00000441915 MAST1Q9Y2H9 1570 aa22.17■■□□□ 1.14
SEMA3B-207ENST00000441915 UNC13BO14795 1591 aa22.15■■□□□ 1.14
SEMA3B-207ENST00000441915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.142e-7■■□□□ 14.4
SEMA3B-207ENST00000441915 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
SEMA3B-207ENST00000441915 TTC37Q6PGP7 1564 aa22.13■■□□□ 1.13
SEMA3B-207ENST00000441915 GPRASP1Q5JY77 1395 aa22.13■■□□□ 1.13
SEMA3B-207ENST00000441915 PLA2R1Q13018 1463 aa22.13■■□□□ 1.13
SEMA3B-207ENST00000441915 NBPF1Q3BBV0 1214 aa22.13■■□□□ 1.13
SEMA3B-207ENST00000441915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.12■■□□□ 1.13
SEMA3B-207ENST00000441915 PARD3Q8TEW0 1356 aa22.12■■□□□ 1.13
SEMA3B-207ENST00000441915 A2MP01023 1474 aa22.11■■□□□ 1.13
SEMA3B-207ENST00000441915 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
SEMA3B-207ENST00000441915 PLXNC1O60486 1568 aa22.09■■□□□ 1.13
SEMA3B-207ENST00000441915 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
SEMA3B-207ENST00000441915 PER1O15534 1290 aaPredicted RBP22.08■■□□□ 1.13
SEMA3B-207ENST00000441915 LAMC1P11047 1609 aa22.08■■□□□ 1.12
SEMA3B-207ENST00000441915 WASHC2CQ9Y4E1 1318 aa22.08■■□□□ 1.12
SEMA3B-207ENST00000441915 MYO5CQ9NQX4 1742 aa22.07■■□□□ 1.12
SEMA3B-207ENST00000441915 COL17A1Q9UMD9 1497 aaPredicted RBP22.07■■□□□ 1.12
SEMA3B-207ENST00000441915 PRDM15P57071 1507 aaPredicted RBP22.06■■□□□ 1.12
SEMA3B-207ENST00000441915 CHD1O14646 1710 aa22.06■■□□□ 1.12
SEMA3B-207ENST00000441915 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
SEMA3B-207ENST00000441915 EIF2AK4Q9P2K8 1649 aaKnown RBP22.05■■□□□ 1.12
SEMA3B-207ENST00000441915 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
SEMA3B-207ENST00000441915 TESK2Q96S53 571 aa22.04■■□□□ 1.12
SEMA3B-207ENST00000441915 ATP10AO60312 1499 aa22.04■■□□□ 1.12
SEMA3B-207ENST00000441915 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
SEMA3B-207ENST00000441915 RRP1P56182 461 aaKnown RBP22.04■■□□□ 1.12
SEMA3B-207ENST00000441915 ABCC2Q92887 1545 aa22.04■■□□□ 1.12
SEMA3B-207ENST00000441915 ERBINQ96RT1 1412 aa22.02■■□□□ 1.12
SEMA3B-207ENST00000441915 DISP3Q9P2K9 1392 aa22.02■■□□□ 1.12
SEMA3B-207ENST00000441915 RCAN3Q9UKA8 241 aa22.02■■□□□ 1.12
SEMA3B-207ENST00000441915 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
SEMA3B-207ENST00000441915 TMF1P82094 1093 aa22.01■■□□□ 1.11
SEMA3B-207ENST00000441915 MAGI2Q86UL8 1455 aa22.01■■□□□ 1.11
SEMA3B-207ENST00000441915 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
SEMA3B-207ENST00000441915 PANK3Q9H999 370 aa21.99■■□□□ 1.11
SEMA3B-207ENST00000441915 PLCH2O75038 1416 aa21.97■■□□□ 1.11
SEMA3B-207ENST00000441915 EFCAB2Q5VUJ9 269 aa21.96■■□□□ 1.11
SEMA3B-207ENST00000441915 NOP58Q9Y2X3 529 aaKnown RBP21.96■■□□□ 1.11
SEMA3B-207ENST00000441915 INSRP06213 1382 aa21.96■■□□□ 1.11
SEMA3B-207ENST00000441915 ANP32AP39687 249 aaKnown RBP21.94■■□□□ 1.1
SEMA3B-207ENST00000441915 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
SEMA3B-207ENST00000441915 ZMYM4Q5VZL5 1548 aa21.94■■□□□ 1.1
SEMA3B-207ENST00000441915 EXOC6Q8TAG9 804 aa21.94■■□□□ 1.1
SEMA3B-207ENST00000441915 MYT1LQ9UL68 1186 aa21.93■■□□□ 1.1
SEMA3B-207ENST00000441915 BLMP54132 1417 aaPredicted RBP21.91■■□□□ 1.1
SEMA3B-207ENST00000441915 RNF17Q9BXT8 1623 aaKnown RBP21.91■■□□□ 1.1
SEMA3B-207ENST00000441915 CDCA7LQ96GN5 454 aa21.91■■□□□ 1.1
SEMA3B-207ENST00000441915 ABCC1P33527 1531 aa21.89■■□□□ 1.09
SEMA3B-207ENST00000441915 IPO9Q96P70 1041 aaKnown RBP21.88■■□□□ 1.09
SEMA3B-207ENST00000441915 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
SEMA3B-207ENST00000441915 ZCCHC11Q5TAX3 1644 aaKnown RBP21.87■■□□□ 1.09
SEMA3B-207ENST00000441915 TCERG1O14776 1098 aaKnown RBP21.85■■□□□ 1.09
SEMA3B-207ENST00000441915 KNSTRNQ9Y448 316 aa21.85■■□□□ 1.09
SEMA3B-207ENST00000441915 SPAG9O60271 1321 aaKnown RBP21.85■■□□□ 1.09
SEMA3B-207ENST00000441915 PAK3O75914 559 aaPredicted RBP21.84■■□□□ 1.09
SEMA3B-207ENST00000441915 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
SEMA3B-207ENST00000441915 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
SEMA3B-207ENST00000441915 MADDQ8WXG6 1647 aa21.84■■□□□ 1.09
SEMA3B-207ENST00000441915 UHRF1BP1LA0JNW5 1464 aa21.83■■□□□ 1.08
SEMA3B-207ENST00000441915 WDR7Q9Y4E6 1490 aa21.83■■□□□ 1.08
SEMA3B-207ENST00000441915 RTEL1-TNFRSF6BF6WH68 1400 aa21.82■■□□□ 1.08
SEMA3B-207ENST00000441915 TRPM2O94759 1503 aa21.82■■□□□ 1.08
SEMA3B-207ENST00000441915 ZBTB47Q9UFB7 747 aaPredicted RBP21.81■■□□□ 1.08
SEMA3B-207ENST00000441915 IQGAP1P46940 1657 aa21.8■■□□□ 1.08
SEMA3B-207ENST00000441915 ADAMTS8Q9UP79 889 aa21.8■■□□□ 1.08
SEMA3B-207ENST00000441915 AFAP1Q8N556 730 aa21.79■■□□□ 1.08
SEMA3B-207ENST00000441915 SCAF11Q99590 1463 aaKnown RBP21.79■■□□□ 1.08
SEMA3B-207ENST00000441915 SPHKAPQ2M3C7 1700 aa21.78■■□□□ 1.08
SEMA3B-207ENST00000441915 PLIN1O60240 522 aa21.78■■□□□ 1.08
SEMA3B-207ENST00000441915 PTPRTO14522 1441 aa21.78■■□□□ 1.08
SEMA3B-207ENST00000441915 CEP152O94986 1710 aa21.78■■□□□ 1.08
SEMA3B-207ENST00000441915 PPP2R1AP30153 589 aa21.78■■□□□ 1.08
SEMA3B-207ENST00000441915 WDR43Q15061 677 aaKnown RBP eCLIP21.78■■□□□ 1.082e-6■□□□□ 9.3
SEMA3B-207ENST00000441915 SCAPERQ9BY12 1400 aa21.77■■□□□ 1.08
SEMA3B-207ENST00000441915 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
SEMA3B-207ENST00000441915 ARAP3Q8WWN8 1544 aa21.76■■□□□ 1.07
SEMA3B-207ENST00000441915 AMER1Q5JTC6 1135 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms