RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 TK2O00142 265 aa12.92□□□□□ -0.34
LINC00354-202ENST00000440860 NBR1Q14596 966 aa12.92□□□□□ -0.34
LINC00354-202ENST00000440860 STAC3Q96MF2 364 aa12.92□□□□□ -0.34
LINC00354-202ENST00000440860 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
LINC00354-202ENST00000440860 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
LINC00354-202ENST00000440860 C6orf132Q5T0Z8 1188 aa12.89□□□□□ -0.35
LINC00354-202ENST00000440860 VPS9D1Q9Y2B5 631 aa12.89□□□□□ -0.35
LINC00354-202ENST00000440860 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
LINC00354-202ENST00000440860 MAP3K7O43318 606 aa12.86□□□□□ -0.35
LINC00354-202ENST00000440860 HRO43593 1189 aa12.86□□□□□ -0.35
LINC00354-202ENST00000440860 COL9A1P20849 921 aa12.86□□□□□ -0.35
LINC00354-202ENST00000440860 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
LINC00354-202ENST00000440860 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
LINC00354-202ENST00000440860 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
LINC00354-202ENST00000440860 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
LINC00354-202ENST00000440860 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
LINC00354-202ENST00000440860 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
LINC00354-202ENST00000440860 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
LINC00354-202ENST00000440860 OSBPP22059 807 aa12.8□□□□□ -0.36
LINC00354-202ENST00000440860 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
LINC00354-202ENST00000440860 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
LINC00354-202ENST00000440860 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
LINC00354-202ENST00000440860 BHMG1C9JSJ3 638 aaPredicted RBP12.77□□□□□ -0.37
LINC00354-202ENST00000440860 MRPL50Q8N5N7 158 aaKnown RBP12.76□□□□□ -0.37
LINC00354-202ENST00000440860 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
LINC00354-202ENST00000440860 SEMA3EO15041 775 aa12.75□□□□□ -0.37
LINC00354-202ENST00000440860 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
LINC00354-202ENST00000440860 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
LINC00354-202ENST00000440860 NBPF3Q9H094 633 aa12.73□□□□□ -0.37
LINC00354-202ENST00000440860 RABGEF1Q9UJ41 708 aa12.73□□□□□ -0.37
LINC00354-202ENST00000440860 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
LINC00354-202ENST00000440860 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.37
LINC00354-202ENST00000440860 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
LINC00354-202ENST00000440860 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
LINC00354-202ENST00000440860 CDCA7LQ96GN5 454 aa12.68□□□□□ -0.38
LINC00354-202ENST00000440860 PRSS12P56730 875 aa12.67□□□□□ -0.38
LINC00354-202ENST00000440860 PACS2Q86VP3 889 aa12.67□□□□□ -0.38
LINC00354-202ENST00000440860 WNT2BQ93097 391 aa12.67□□□□□ -0.38
LINC00354-202ENST00000440860 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
LINC00354-202ENST00000440860 PTPN5P54829 565 aa12.66□□□□□ -0.38
LINC00354-202ENST00000440860 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
LINC00354-202ENST00000440860 SEPT9Q9UHD8 586 aaPredicted RBP12.66□□□□□ -0.38
LINC00354-202ENST00000440860 NUTM2FA1L443 756 aa12.63□□□□□ -0.39
LINC00354-202ENST00000440860 NPDC1Q9NQX5 325 aaPredicted RBP12.63□□□□□ -0.39
LINC00354-202ENST00000440860 FAM198AQ9UFP1 575 aa12.62□□□□□ -0.39
LINC00354-202ENST00000440860 LAPTM4BQ86VI4 370 aa12.61□□□□□ -0.39
LINC00354-202ENST00000440860 TESPA1A2RU30 521 aaPredicted RBP12.6□□□□□ -0.39
LINC00354-202ENST00000440860 SMAPO00193 183 aa12.6□□□□□ -0.39
LINC00354-202ENST00000440860 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
LINC00354-202ENST00000440860 THSD4Q6ZMP0 1018 aa12.59□□□□□ -0.39
LINC00354-202ENST00000440860 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
LINC00354-202ENST00000440860 ANKK1Q8NFD2 765 aa12.58□□□□□ -0.4
LINC00354-202ENST00000440860 PNMA3Q9UL41 463 aa12.58□□□□□ -0.4
LINC00354-202ENST00000440860 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
LINC00354-202ENST00000440860 RBM26Q5T8P6 1007 aaKnown RBP12.57□□□□□ -0.4
LINC00354-202ENST00000440860 TATDN2Q93075 761 aa12.57□□□□□ -0.4
LINC00354-202ENST00000440860 PADI6Q6TGC4 694 aa12.56□□□□□ -0.4
LINC00354-202ENST00000440860 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
LINC00354-202ENST00000440860 NUDT18Q6ZVK8 323 aa12.55□□□□□ -0.4
LINC00354-202ENST00000440860 BCAMP50895 628 aa12.54□□□□□ -0.4
LINC00354-202ENST00000440860 PTGDRQ13258 359 aa12.54□□□□□ -0.4
LINC00354-202ENST00000440860 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
LINC00354-202ENST00000440860 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
LINC00354-202ENST00000440860 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
LINC00354-202ENST00000440860 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
LINC00354-202ENST00000440860 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
LINC00354-202ENST00000440860 FCHSD2O94868 740 aa12.49□□□□□ -0.41
LINC00354-202ENST00000440860 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
LINC00354-202ENST00000440860 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
LINC00354-202ENST00000440860 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
LINC00354-202ENST00000440860 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
LINC00354-202ENST00000440860 FAM161AQ3B820 660 aa12.45□□□□□ -0.42
LINC00354-202ENST00000440860 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
LINC00354-202ENST00000440860 HPS5Q9UPZ3 1129 aa12.44□□□□□ -0.42
LINC00354-202ENST00000440860 TULP1O00294 542 aaPredicted RBP12.42□□□□□ -0.42
LINC00354-202ENST00000440860 PPP4CP60510 307 aa12.42□□□□□ -0.42
LINC00354-202ENST00000440860 EYA1Q99502 592 aa12.42□□□□□ -0.42
LINC00354-202ENST00000440860 TSR3Q9UJK0 312 aaKnown RBP12.42□□□□□ -0.42
LINC00354-202ENST00000440860 RNF40O75150 1001 aa12.41□□□□□ -0.42
LINC00354-202ENST00000440860 HIC1Q14526 733 aa12.41□□□□□ -0.42
LINC00354-202ENST00000440860 RBM46Q8TBY0 533 aaKnown RBP12.4□□□□□ -0.42
LINC00354-202ENST00000440860 FECHP22830 423 aa12.39□□□□□ -0.43
LINC00354-202ENST00000440860 ADGRG1Q9Y653 693 aa12.39□□□□□ -0.43
LINC00354-202ENST00000440860 GNPATO15228 680 aa12.38□□□□□ -0.43
LINC00354-202ENST00000440860 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
LINC00354-202ENST00000440860 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
LINC00354-202ENST00000440860 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
LINC00354-202ENST00000440860 RCCD1A6NED2 376 aa12.33□□□□□ -0.44
LINC00354-202ENST00000440860 GPR37O15354 613 aa12.33□□□□□ -0.44
LINC00354-202ENST00000440860 OATP04181 439 aa12.33□□□□□ -0.44
LINC00354-202ENST00000440860 DNAJB2P25686 324 aa12.32□□□□□ -0.44
LINC00354-202ENST00000440860 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
LINC00354-202ENST00000440860 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
LINC00354-202ENST00000440860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC00354-202ENST00000440860 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
LINC00354-202ENST00000440860 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.45
LINC00354-202ENST00000440860 METTL3Q86U44 580 aaKnown RBP12.26□□□□□ -0.45
LINC00354-202ENST00000440860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.25□□□□□ -0.45
LINC00354-202ENST00000440860 APLP1P51693 650 aa12.24□□□□□ -0.45
LINC00354-202ENST00000440860 KCNC4Q03721 635 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms