RNA–Protein interactions for RNA: ENST00000440545.1

AC007879.4-201, humanhuman

TSL 3 BASIC

Gene AC007879.4, Length 361 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.4-201ENST00000440545 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
AC007879.4-201ENST00000440545 PCDHGA10Q9Y5H3 936 aa8.5□□□□□ -1.05
AC007879.4-201ENST00000440545 LARP6Q9BRS8 491 aaKnown RBP8.49□□□□□ -1.05
AC007879.4-201ENST00000440545 WBP1LQ9NX94 342 aa8.49□□□□□ -1.05
AC007879.4-201ENST00000440545 RYDENQ9NUL5 291 aaKnown RBP8.48□□□□□ -1.05
AC007879.4-201ENST00000440545 KCNC4Q03721 635 aa8.47□□□□□ -1.05
AC007879.4-201ENST00000440545 PAXIP1Q6ZW49 1069 aaPredicted RBP8.47□□□□□ -1.05
AC007879.4-201ENST00000440545 LAPTM4BQ86VI4 370 aa8.47□□□□□ -1.05
AC007879.4-201ENST00000440545 ZFRQ96KR1 1074 aaKnown RBP8.47□□□□□ -1.05
AC007879.4-201ENST00000440545 DNAJC5Q9H3Z4 198 aa8.47□□□□□ -1.05
AC007879.4-201ENST00000440545 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
AC007879.4-201ENST00000440545 NYAP1Q6ZVC0 841 aa8.46□□□□□ -1.06
AC007879.4-201ENST00000440545 BBXQ8WY36 941 aaPredicted RBP8.46□□□□□ -1.06
AC007879.4-201ENST00000440545 DDX27Q96GQ7 796 aaKnown RBP8.46□□□□□ -1.06
AC007879.4-201ENST00000440545 CFAP44Q96MT7 982 aa8.46□□□□□ -1.06
AC007879.4-201ENST00000440545 LCE2BO14633 110 aa8.45□□□□□ -1.06
AC007879.4-201ENST00000440545 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
AC007879.4-201ENST00000440545 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
AC007879.4-201ENST00000440545 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
AC007879.4-201ENST00000440545 FBXW7Q969H0 707 aa8.43□□□□□ -1.06
AC007879.4-201ENST00000440545 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
AC007879.4-201ENST00000440545 GFRA3O60609 400 aa8.41□□□□□ -1.06
AC007879.4-201ENST00000440545 PHF14O94880 888 aa8.41□□□□□ -1.06
AC007879.4-201ENST00000440545 LAPTM4AQ15012 233 aa8.41□□□□□ -1.06
AC007879.4-201ENST00000440545 MFSD10Q14728 455 aa8.4□□□□□ -1.06
AC007879.4-201ENST00000440545 TRAF7Q6Q0C0 670 aa8.4□□□□□ -1.06
AC007879.4-201ENST00000440545 TSR3Q9UJK0 312 aaKnown RBP8.39□□□□□ -1.07
AC007879.4-201ENST00000440545 HPS5Q9UPZ3 1129 aa8.39□□□□□ -1.07
AC007879.4-201ENST00000440545 ONECUT3O60422 494 aaPredicted RBP8.38□□□□□ -1.07
AC007879.4-201ENST00000440545 C6orf132Q5T0Z8 1188 aa8.38□□□□□ -1.07
AC007879.4-201ENST00000440545 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.38□□□□□ -1.07
AC007879.4-201ENST00000440545 TRIM6-TRIM34B2RNG4 842 aa8.37□□□□□ -1.07
AC007879.4-201ENST00000440545 GTPBP6O43824 516 aaPredicted RBP8.37□□□□□ -1.07
AC007879.4-201ENST00000440545 FAM98CQ17RN3 349 aaKnown RBP8.37□□□□□ -1.07
AC007879.4-201ENST00000440545 LRCH3Q96II8 777 aa8.37□□□□□ -1.07
AC007879.4-201ENST00000440545 SPRYD3Q8NCJ5 442 aa8.35□□□□□ -1.07
AC007879.4-201ENST00000440545 RBM33Q96EV2 1170 aaKnown RBP8.34□□□□□ -1.07
AC007879.4-201ENST00000440545 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
AC007879.4-201ENST00000440545 EPAS1Q99814 870 aa8.33□□□□□ -1.08
AC007879.4-201ENST00000440545 PRKD2Q9BZL6 878 aa8.33□□□□□ -1.08
AC007879.4-201ENST00000440545 KDM2AQ9Y2K7 1162 aa8.33□□□□□ -1.08
AC007879.4-201ENST00000440545 NRG2O14511 850 aaPredicted RBP8.3□□□□□ -1.08
AC007879.4-201ENST00000440545 PPP4CP60510 307 aa8.3□□□□□ -1.08
AC007879.4-201ENST00000440545 TJAP1Q5JTD0 557 aa8.3□□□□□ -1.08
AC007879.4-201ENST00000440545 CADPS2Q86UW7 1296 aa8.3□□□□□ -1.08
AC007879.4-201ENST00000440545 DPYSL4O14531 572 aa8.29□□□□□ -1.08
AC007879.4-201ENST00000440545 TSKSQ9UJT2 592 aa8.29□□□□□ -1.08
AC007879.4-201ENST00000440545 DDX12PQ92771 950 aa8.28□□□□□ -1.08
AC007879.4-201ENST00000440545 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
AC007879.4-201ENST00000440545 PACS2Q86VP3 889 aa8.27□□□□□ -1.09
AC007879.4-201ENST00000440545 VSIG10Q8N0Z9 540 aa8.27□□□□□ -1.09
AC007879.4-201ENST00000440545 SAMD7Q7Z3H4 446 aa8.26□□□□□ -1.09
AC007879.4-201ENST00000440545 MTRQ99707 1265 aa8.26□□□□□ -1.09
AC007879.4-201ENST00000440545 SMAPO00193 183 aa8.25□□□□□ -1.09
AC007879.4-201ENST00000440545 CAMK2BQ13554 666 aa8.25□□□□□ -1.09
AC007879.4-201ENST00000440545 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
AC007879.4-201ENST00000440545 ZNF787Q6DD87 383 aa8.25□□□□□ -1.09
AC007879.4-201ENST00000440545 V9GY48 417 aaPredicted RBP8.25□□□□□ -1.09
AC007879.4-201ENST00000440545 IL21Q9HBE4 155 aa8.23□□□□□ -1.09
AC007879.4-201ENST00000440545 MAP3K7O43318 606 aa8.22□□□□□ -1.09
AC007879.4-201ENST00000440545 EN1Q05925 392 aaPredicted RBP8.22□□□□□ -1.09
AC007879.4-201ENST00000440545 NBR1Q14596 966 aa8.22□□□□□ -1.09
AC007879.4-201ENST00000440545 ZNF516Q92618 1163 aa8.22□□□□□ -1.09
AC007879.4-201ENST00000440545 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
AC007879.4-201ENST00000440545 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
AC007879.4-201ENST00000440545 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
AC007879.4-201ENST00000440545 ZNF775Q96BV0 537 aaPredicted RBP8.2□□□□□ -1.1
AC007879.4-201ENST00000440545 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
AC007879.4-201ENST00000440545 FAM198AQ9UFP1 575 aa8.2□□□□□ -1.1
AC007879.4-201ENST00000440545 NKX2-3Q8TAU0 364 aa8.19□□□□□ -1.1
AC007879.4-201ENST00000440545 RNF40O75150 1001 aa8.17□□□□□ -1.1
AC007879.4-201ENST00000440545 PRSS12P56730 875 aa8.17□□□□□ -1.1
AC007879.4-201ENST00000440545 APLP1P51693 650 aa8.16□□□□□ -1.1
AC007879.4-201ENST00000440545 TATDN2Q93075 761 aa8.16□□□□□ -1.1
AC007879.4-201ENST00000440545 PNMA3Q9UL41 463 aa8.16□□□□□ -1.1
AC007879.4-201ENST00000440545 NBPF26B4DH59 902 aa8.13□□□□□ -1.11
AC007879.4-201ENST00000440545 PRIM1P49642 420 aaKnown RBP8.13□□□□□ -1.11
AC007879.4-201ENST00000440545 PDIA6Q15084 440 aa8.13□□□□□ -1.11
AC007879.4-201ENST00000440545 COPS2P61201 443 aa8.12□□□□□ -1.11
AC007879.4-201ENST00000440545 GGCXP38435 758 aa8.11□□□□□ -1.11
AC007879.4-201ENST00000440545 HDGFP51858 240 aaKnown RBP8.11□□□□□ -1.11
AC007879.4-201ENST00000440545 NUDT18Q6ZVK8 323 aa8.11□□□□□ -1.11
AC007879.4-201ENST00000440545 CERKQ8TCT0 537 aa8.11□□□□□ -1.11
AC007879.4-201ENST00000440545 BCANQ96GW7 911 aa8.11□□□□□ -1.11
AC007879.4-201ENST00000440545 TRIM67Q6ZTA4 783 aa8.09□□□□□ -1.11
AC007879.4-201ENST00000440545 PRKCSHP14314 528 aaPredicted RBP8.08□□□□□ -1.12
AC007879.4-201ENST00000440545 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
AC007879.4-201ENST00000440545 CDHR5Q9HBB8 845 aa8.08□□□□□ -1.12
AC007879.4-201ENST00000440545 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
AC007879.4-201ENST00000440545 SPDYE16A6NNV3 312 aaPredicted RBP8.07□□□□□ -1.12
AC007879.4-201ENST00000440545 POTECB2RU33 542 aa8.06□□□□□ -1.12
AC007879.4-201ENST00000440545 ZPR1O75312 459 aa8.06□□□□□ -1.12
AC007879.4-201ENST00000440545 MYT1Q01538 1121 aa8.06□□□□□ -1.12
AC007879.4-201ENST00000440545 SWT1Q5T5J6 900 aaKnown RBP8.06□□□□□ -1.12
AC007879.4-201ENST00000440545 SLC19A1P41440 591 aa8.05□□□□□ -1.12
AC007879.4-201ENST00000440545 PKDCCQ504Y2 493 aa8.05□□□□□ -1.12
AC007879.4-201ENST00000440545 EMID1Q96A84 441 aaPredicted RBP8.05□□□□□ -1.12
AC007879.4-201ENST00000440545 RNF223E7ERA6 249 aa8.03□□□□□ -1.12
AC007879.4-201ENST00000440545 SLF2Q8IX21 1173 aa8.03□□□□□ -1.12
AC007879.4-201ENST00000440545 NECTIN2Q92692 538 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms