RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.14
APTR-204ENST00000440088 RAPGEF3O95398 923 aa28.38■■■□□ 2.13
APTR-204ENST00000440088 RICTORQ6R327 1708 aa28.38■■■□□ 2.13
APTR-204ENST00000440088 EIF2AK4Q9P2K8 1649 aaKnown RBP28.37■■■□□ 2.13
APTR-204ENST00000440088 RPRD2Q5VT52 1461 aaKnown RBP28.36■■■□□ 2.13
APTR-204ENST00000440088 PPP1R15AO75807 674 aaPredicted RBP28.33■■■□□ 2.13
APTR-204ENST00000440088 DEPDC5O75140 1603 aa28.33■■■□□ 2.13
APTR-204ENST00000440088 A2MP01023 1474 aa28.32■■■□□ 2.12
APTR-204ENST00000440088 ZNF316A6NFI3 1004 aaPredicted RBP28.3■■■□□ 2.12
APTR-204ENST00000440088 KIF3BO15066 747 aa28.29■■■□□ 2.12
APTR-204ENST00000440088 ABCA6Q8N139 1617 aa28.29■■■□□ 2.12
APTR-204ENST00000440088 FRMPD1Q5SYB0 1578 aa28.28■■■□□ 2.12
APTR-204ENST00000440088 KANK1Q14678 1352 aa28.25■■■□□ 2.11
APTR-204ENST00000440088 ZMYM4Q5VZL5 1548 aa28.24■■■□□ 2.11
APTR-204ENST00000440088 PRDM15P57071 1507 aaPredicted RBP28.24■■■□□ 2.11
APTR-204ENST00000440088 DIP2CQ9Y2E4 1556 aa28.23■■■□□ 2.11
APTR-204ENST00000440088 VWDEQ8N2E2 1590 aa28.21■■■□□ 2.11
APTR-204ENST00000440088 MROH1Q8NDA8 1641 aa28.2■■■□□ 2.11
APTR-204ENST00000440088 L3MBTL2Q969R5 705 aa28.2■■■□□ 2.11
APTR-204ENST00000440088 RNF17Q9BXT8 1623 aaKnown RBP28.19■■■□□ 2.1
APTR-204ENST00000440088 BCORL1Q5H9F3 1711 aa28.19■■■□□ 2.1
APTR-204ENST00000440088 YEATS2Q9ULM3 1422 aa28.17■■■□□ 2.1
APTR-204ENST00000440088 TET3O43151 1660 aa28.17■■■□□ 2.1
APTR-204ENST00000440088 DNAJC5Q9H3Z4 198 aa28.16■■■□□ 2.1
APTR-204ENST00000440088 ATP10AO60312 1499 aa28.14■■■□□ 2.1
APTR-204ENST00000440088 CCDC144AA2RUR9 1427 aa28.14■■■□□ 2.1
APTR-204ENST00000440088 E9PCH4 1651 aa28.13■■■□□ 2.09
APTR-204ENST00000440088 PLA2R1Q13018 1463 aa28.13■■■□□ 2.09
APTR-204ENST00000440088 LMTK2Q8IWU2 1503 aa28.08■■■□□ 2.09
APTR-204ENST00000440088 COL17A1Q9UMD9 1497 aaPredicted RBP28.08■■■□□ 2.09
APTR-204ENST00000440088 GGT6Q6P531 493 aa28.08■■■□□ 2.08
APTR-204ENST00000440088 EFCAB6Q5THR3 1501 aa28.05■■■□□ 2.08
APTR-204ENST00000440088 CEP152O94986 1710 aa28.04■■■□□ 2.08
APTR-204ENST00000440088 SPHKAPQ2M3C7 1700 aa28.03■■■□□ 2.08
APTR-204ENST00000440088 PTPRTO14522 1441 aa28.03■■■□□ 2.08
APTR-204ENST00000440088 REREQ9P2R6 1566 aa28.02■■■□□ 2.08
APTR-204ENST00000440088 TRPM2O94759 1503 aa28.02■■■□□ 2.08
APTR-204ENST00000440088 TRHP20396 242 aaPredicted RBP27.99■■■□□ 2.07
APTR-204ENST00000440088 DIEXFQ68CQ4 756 aaKnown RBP27.99■■■□□ 2.07
APTR-204ENST00000440088 WASHC2CQ9Y4E1 1318 aa27.99■■■□□ 2.07
APTR-204ENST00000440088 ABCC3O15438 1527 aa27.98■■■□□ 2.07
APTR-204ENST00000440088 ARHGEF40Q8TER5 1519 aa27.97■■■□□ 2.07
APTR-204ENST00000440088 NBPF8Q3BBV2 869 aa27.96■■■□□ 2.07
APTR-204ENST00000440088 AGLP35573 1532 aa27.95■■■□□ 2.06
APTR-204ENST00000440088 ZC3H13Q5T200 1668 aaKnown RBP27.94■■■□□ 2.06
APTR-204ENST00000440088 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
APTR-204ENST00000440088 DCAF11Q8TEB1 546 aa27.92■■■□□ 2.06
APTR-204ENST00000440088 CAMSAP1Q5T5Y3 1602 aa27.91■■■□□ 2.06
APTR-204ENST00000440088 NPATQ14207 1427 aa27.91■■■□□ 2.06
APTR-204ENST00000440088 CLTCL1P53675 1640 aa27.9■■■□□ 2.06
APTR-204ENST00000440088 RGL3Q3MIN7 710 aa27.9■■■□□ 2.06
APTR-204ENST00000440088 SPATA31E1Q6ZUB1 1445 aa27.87■■■□□ 2.05
APTR-204ENST00000440088 ZNF326Q5BKZ1 582 aaKnown RBP27.87■■■□□ 2.05
APTR-204ENST00000440088 KDM2AQ9Y2K7 1162 aa27.87■■■□□ 2.05
APTR-204ENST00000440088 ARHGAP31Q2M1Z3 1444 aa27.85■■■□□ 2.05
APTR-204ENST00000440088 PPP6R1Q9UPN7 881 aa27.84■■■□□ 2.05
APTR-204ENST00000440088 EIF4G2P78344 907 aaKnown RBP eCLIP27.83■■■□□ 2.05
APTR-204ENST00000440088 SIGLEC1Q9BZZ2 1709 aa27.83■■■□□ 2.05
APTR-204ENST00000440088 CNTLNQ9NXG0 1405 aa27.83■■■□□ 2.05
APTR-204ENST00000440088 NEURL4Q96JN8 1562 aa27.82■■■□□ 2.04
APTR-204ENST00000440088 HIRIP3Q9BW71 556 aaPredicted RBP27.82■■■□□ 2.04
APTR-204ENST00000440088 CFAP65Q6ZU64 1925 aaKnown RBP27.82■■■□□ 2.04
APTR-204ENST00000440088 RALGAPBQ86X10 1494 aa27.8■■■□□ 2.04
APTR-204ENST00000440088 UGGT1Q9NYU2 1555 aa27.8■■■□□ 2.04
APTR-204ENST00000440088 KIF1BO60333 1816 aa27.79■■■□□ 2.04
APTR-204ENST00000440088 PRAG1Q86YV5 1406 aa27.78■■■□□ 2.04
APTR-204ENST00000440088 HSPA5P11021 654 aaKnown RBP27.78■■■□□ 2.04
APTR-204ENST00000440088 NOS1P29475 1434 aa27.77■■■□□ 2.04
APTR-204ENST00000440088 STAC3Q96MF2 364 aa27.75■■■□□ 2.03
APTR-204ENST00000440088 MLECQ14165 292 aa27.71■■■□□ 2.03
APTR-204ENST00000440088 TRPM1Q7Z4N2 1603 aa27.71■■■□□ 2.03
APTR-204ENST00000440088 SYNMO15061 1565 aa27.7■■■□□ 2.02
APTR-204ENST00000440088 CLTCQ00610 1675 aaKnown RBP27.7■■■□□ 2.02
APTR-204ENST00000440088 PREX1Q8TCU6 1659 aa27.69■■■□□ 2.02
APTR-204ENST00000440088 ADGRB3O60242 1522 aa27.68■■■□□ 2.02
APTR-204ENST00000440088 ARID4BQ4LE39 1312 aaPredicted RBP27.68■■■□□ 2.02
APTR-204ENST00000440088 PIK3C2BO00750 1634 aa27.68■■■□□ 2.02
APTR-204ENST00000440088 ROCK2O75116 1388 aaKnown RBP27.68■■■□□ 2.02
APTR-204ENST00000440088 CARD11Q9BXL7 1154 aa27.68■■■□□ 2.02
APTR-204ENST00000440088 MROH2AA6NES4 1674 aa27.67■■■□□ 2.02
APTR-204ENST00000440088 USP47Q96K76 1375 aa27.67■■■□□ 2.02
APTR-204ENST00000440088 SLC52A1Q9NWF4 448 aa27.65■■■□□ 2.02
APTR-204ENST00000440088 ESF1Q9H501 851 aaKnown RBP27.64■■■□□ 2.02
APTR-204ENST00000440088 MADDQ8WXG6 1647 aa27.64■■■□□ 2.02
APTR-204ENST00000440088 CHGAP10645 457 aaKnown RBP27.63■■■□□ 2.01
APTR-204ENST00000440088 ERVK-7P63135 1459 aa27.62■■■□□ 2.01
APTR-204ENST00000440088 GPRASP1Q5JY77 1395 aa27.62■■■□□ 2.01
APTR-204ENST00000440088 MYOM2P54296 1465 aa27.61■■■□□ 2.01
APTR-204ENST00000440088 IFT172Q9UG01 1749 aa27.61■■■□□ 2.01
APTR-204ENST00000440088 DDX10Q13206 875 aaKnown RBP27.59■■■□□ 2.01
APTR-204ENST00000440088 FBXO31Q5XUX0 539 aaPredicted RBP27.59■■■□□ 2.01
APTR-204ENST00000440088 LAMC1P11047 1609 aa27.59■■■□□ 2.01
APTR-204ENST00000440088 IDI1Q13907 227 aa27.58■■■□□ 2.01
APTR-204ENST00000440088 NBPF1Q3BBV0 1214 aa27.58■■■□□ 2.01
APTR-204ENST00000440088 RPGRIP1LQ68CZ1 1315 aa27.56■■■□□ 2
APTR-204ENST00000440088 SPATA31D1Q6ZQQ2 1576 aa27.55■■■□□ 2
APTR-204ENST00000440088 WASHC2AQ641Q2 1341 aa27.55■■■□□ 2
APTR-204ENST00000440088 ZMYM3Q14202 1370 aa27.55■■■□□ 2
APTR-204ENST00000440088 PPLO60437 1756 aa27.53■■■□□ 2
APTR-204ENST00000440088 MIER1Q8N108 512 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms