RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
CHEK1-204ENST00000438015 FOXD4L5Q5VV16 416 aaPredicted RBP13.98□□□□□ -0.17
CHEK1-204ENST00000438015 FOXD4L4Q8WXT5 416 aaPredicted RBP13.98□□□□□ -0.17
CHEK1-204ENST00000438015 NUTM2DQ5VT03 806 aaPredicted RBP13.97□□□□□ -0.17
CHEK1-204ENST00000438015 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
CHEK1-204ENST00000438015 U2AF1L5P0DN76 240 aaPredicted RBP13.97□□□□□ -0.17
CHEK1-204ENST00000438015 U2AF1Q01081 240 aaKnown RBP eCLIP13.97□□□□□ -0.178e-7■□□□□ 8.6
CHEK1-204ENST00000438015 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
CHEK1-204ENST00000438015 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.17
CHEK1-204ENST00000438015 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
CHEK1-204ENST00000438015 GOLGA6L22H0YM25 854 aa13.95□□□□□ -0.18
CHEK1-204ENST00000438015 PTMAP06454 111 aaKnown RBP13.95□□□□□ -0.18
CHEK1-204ENST00000438015 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
CHEK1-204ENST00000438015 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
CHEK1-204ENST00000438015 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
CHEK1-204ENST00000438015 FOXD4L6Q3SYB3 417 aaPredicted RBP13.93□□□□□ -0.18
CHEK1-204ENST00000438015 FOXD4L3Q6VB84 417 aaPredicted RBP13.93□□□□□ -0.18
CHEK1-204ENST00000438015 ANKRD30BQ9BXX2 1392 aa13.93□□□□□ -0.18
CHEK1-204ENST00000438015 NESP48681 1621 aa13.93□□□□□ -0.18
CHEK1-204ENST00000438015 FYCO1Q9BQS8 1478 aa13.93□□□□□ -0.18
CHEK1-204ENST00000438015 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
CHEK1-204ENST00000438015 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
CHEK1-204ENST00000438015 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
CHEK1-204ENST00000438015 MSNP26038 577 aaKnown RBP13.91□□□□□ -0.18
CHEK1-204ENST00000438015 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
CHEK1-204ENST00000438015 CFAP53Q96M91 514 aa13.91□□□□□ -0.18
CHEK1-204ENST00000438015 PANK2Q9BZ23 570 aa13.9□□□□□ -0.18
CHEK1-204ENST00000438015 SEC24BO95487 1268 aa13.9□□□□□ -0.18
CHEK1-204ENST00000438015 NOL8Q76FK4 1167 aaKnown RBP13.9□□□□□ -0.18
CHEK1-204ENST00000438015 PPP2R1AP30153 589 aa13.9□□□□□ -0.19
CHEK1-204ENST00000438015 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
CHEK1-204ENST00000438015 FAM43AQ8N2R8 423 aa13.89□□□□□ -0.19
CHEK1-204ENST00000438015 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
CHEK1-204ENST00000438015 IGHDP01880 384 aa13.89□□□□□ -0.19
CHEK1-204ENST00000438015 MAPK8IP3Q9UPT6 1336 aa13.89□□□□□ -0.19
CHEK1-204ENST00000438015 TRAK2O60296 914 aa13.88□□□□□ -0.19
CHEK1-204ENST00000438015 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 FAM13BQ9NYF5 915 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 STK26Q9P289 416 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 CCDC144AA2RUR9 1427 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 RBM10P98175 930 aaKnown RBP13.87□□□□□ -0.19
CHEK1-204ENST00000438015 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
CHEK1-204ENST00000438015 E9PSI1 815 aa13.86□□□□□ -0.19
CHEK1-204ENST00000438015 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
CHEK1-204ENST00000438015 MPNDQ8N594 471 aa13.86□□□□□ -0.19
CHEK1-204ENST00000438015 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
CHEK1-204ENST00000438015 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
CHEK1-204ENST00000438015 C22orf23Q9BZE7 217 aa13.86□□□□□ -0.19
CHEK1-204ENST00000438015 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
CHEK1-204ENST00000438015 DDX49Q9Y6V7 483 aaKnown RBP13.85□□□□□ -0.19
CHEK1-204ENST00000438015 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
CHEK1-204ENST00000438015 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
CHEK1-204ENST00000438015 SOX12O15370 315 aa13.83□□□□□ -0.19
CHEK1-204ENST00000438015 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.19
CHEK1-204ENST00000438015 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.19
CHEK1-204ENST00000438015 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
CHEK1-204ENST00000438015 ANKRD45Q5TZF3 282 aa13.83□□□□□ -0.2
CHEK1-204ENST00000438015 TSR2Q969E8 191 aaKnown RBP13.83□□□□□ -0.2
CHEK1-204ENST00000438015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHEK1-204ENST00000438015 TNNQ9UQP3 1299 aa13.82□□□□□ -0.2
CHEK1-204ENST00000438015 CHMP5Q9NZZ3 219 aa13.82□□□□□ -0.2
CHEK1-204ENST00000438015 RRAGDQ9NQL2 400 aaPredicted RBP13.81□□□□□ -0.2
CHEK1-204ENST00000438015 WASHC2CQ9Y4E1 1318 aa13.81□□□□□ -0.2
CHEK1-204ENST00000438015 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
CHEK1-204ENST00000438015 NCAPD3P42695 1498 aa13.81□□□□□ -0.2
CHEK1-204ENST00000438015 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
CHEK1-204ENST00000438015 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
CHEK1-204ENST00000438015 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
CHEK1-204ENST00000438015 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
CHEK1-204ENST00000438015 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
CHEK1-204ENST00000438015 MCM4P33991 863 aa13.8□□□□□ -0.2
CHEK1-204ENST00000438015 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
CHEK1-204ENST00000438015 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
CHEK1-204ENST00000438015 BCL11BQ9C0K0 894 aaPredicted RBP13.79□□□□□ -0.2
CHEK1-204ENST00000438015 RPRD2Q5VT52 1461 aaKnown RBP13.79□□□□□ -0.2
CHEK1-204ENST00000438015 KIAA1107Q9UPP5 1409 aa13.79□□□□□ -0.2
CHEK1-204ENST00000438015 C1orf115Q9H7X2 142 aa13.79□□□□□ -0.2
CHEK1-204ENST00000438015 DAPK1P53355 1430 aa13.79□□□□□ -0.2
CHEK1-204ENST00000438015 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
CHEK1-204ENST00000438015 SLFN5Q08AF3 891 aa13.78□□□□□ -0.2
CHEK1-204ENST00000438015 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.2
CHEK1-204ENST00000438015 XRCC6P12956 609 aaKnown RBP eCLIP13.77□□□□□ -0.2
CHEK1-204ENST00000438015 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
CHEK1-204ENST00000438015 ZKSCAN2Q63HK3 967 aa13.77□□□□□ -0.21
CHEK1-204ENST00000438015 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
CHEK1-204ENST00000438015 GGT6Q6P531 493 aa13.76□□□□□ -0.21
CHEK1-204ENST00000438015 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
CHEK1-204ENST00000438015 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
CHEK1-204ENST00000438015 ZMYND15Q9H091 742 aa13.76□□□□□ -0.21
CHEK1-204ENST00000438015 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
CHEK1-204ENST00000438015 KIF3BO15066 747 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 ABCC5O15440 1437 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
CHEK1-204ENST00000438015 ESPNB1AK53 854 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms