RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 SIN3AQ96ST3 1273 aa10.48□□□□□ -0.73
GAPVD1-209ENST00000436712 SETD5Q9C0A6 1442 aa10.48□□□□□ -0.73
GAPVD1-209ENST00000436712 FTSJ3Q8IY81 847 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-209ENST00000436712 CFDP1Q9UEE9 299 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-209ENST00000436712 TTC37Q6PGP7 1564 aa10.47□□□□□ -0.73
GAPVD1-209ENST00000436712 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-209ENST00000436712 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
GAPVD1-209ENST00000436712 PTPRKQ15262 1439 aa10.46□□□□□ -0.73
GAPVD1-209ENST00000436712 TPM2P07951 284 aa10.46□□□□□ -0.73
GAPVD1-209ENST00000436712 KDM5BQ9UGL1 1544 aa10.46□□□□□ -0.73
GAPVD1-209ENST00000436712 UHRF1BP1LA0JNW5 1464 aa10.46□□□□□ -0.73
GAPVD1-209ENST00000436712 TEX2Q8IWB9 1127 aa10.46□□□□□ -0.74
GAPVD1-209ENST00000436712 MAPKBP1O60336 1514 aa10.46□□□□□ -0.74
GAPVD1-209ENST00000436712 GPATCH8Q9UKJ3 1502 aaKnown RBP10.46□□□□□ -0.74
GAPVD1-209ENST00000436712 ANP32CO43423 234 aa10.45□□□□□ -0.74
GAPVD1-209ENST00000436712 DDX10Q13206 875 aaKnown RBP10.45□□□□□ -0.74
GAPVD1-209ENST00000436712 SMAP1Q8IYB5 467 aaPredicted RBP10.45□□□□□ -0.74
GAPVD1-209ENST00000436712 PPP1R15AO75807 674 aaPredicted RBP10.45□□□□□ -0.74
GAPVD1-209ENST00000436712 CHRM1P11229 460 aaPredicted RBP10.45□□□□□ -0.74
GAPVD1-209ENST00000436712 ABCC10Q5T3U5 1492 aa10.45□□□□□ -0.74
GAPVD1-209ENST00000436712 ITSN2Q9NZM3 1697 aa10.45□□□□□ -0.74
GAPVD1-209ENST00000436712 SAMD1Q6SPF0 538 aaPredicted RBP10.44□□□□□ -0.74
GAPVD1-209ENST00000436712 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
GAPVD1-209ENST00000436712 CAMSAP2Q08AD1 1489 aa10.44□□□□□ -0.74
GAPVD1-209ENST00000436712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.44□□□□□ -0.74
GAPVD1-209ENST00000436712 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
GAPVD1-209ENST00000436712 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
GAPVD1-209ENST00000436712 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
GAPVD1-209ENST00000436712 DDRGK1Q96HY6 314 aa10.43□□□□□ -0.74
GAPVD1-209ENST00000436712 ASXL2Q76L83 1435 aa10.42□□□□□ -0.74
GAPVD1-209ENST00000436712 CDC42BPBQ9Y5S2 1711 aa10.42□□□□□ -0.74
GAPVD1-209ENST00000436712 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
GAPVD1-209ENST00000436712 L1TD1Q5T7N2 865 aaKnown RBP10.42□□□□□ -0.74
GAPVD1-209ENST00000436712 ARHGAP5Q13017 1502 aa10.41□□□□□ -0.74
GAPVD1-209ENST00000436712 TCOF1Q13428 1488 aaKnown RBP10.41□□□□□ -0.74
GAPVD1-209ENST00000436712 WDR7Q9Y4E6 1490 aa10.41□□□□□ -0.74
GAPVD1-209ENST00000436712 HNRNPMP52272 730 aaKnown RBP eCLIP10.41□□□□□ -0.746e-13■■■■■ 43.1
GAPVD1-209ENST00000436712 TMEM51Q9NW97 253 aa10.4□□□□□ -0.74
GAPVD1-209ENST00000436712 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.74
GAPVD1-209ENST00000436712 PREX2Q70Z35 1606 aa10.4□□□□□ -0.74
GAPVD1-209ENST00000436712 MYO5CQ9NQX4 1742 aa10.4□□□□□ -0.74
GAPVD1-209ENST00000436712 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.75
GAPVD1-209ENST00000436712 MAP7D2Q96T17 732 aa10.4□□□□□ -0.75
GAPVD1-209ENST00000436712 FOXD1Q16676 465 aa10.39□□□□□ -0.75
GAPVD1-209ENST00000436712 BCCIPQ9P287 314 aaKnown RBP eCLIP10.39□□□□□ -0.75
GAPVD1-209ENST00000436712 DAPK1P53355 1430 aa10.39□□□□□ -0.75
GAPVD1-209ENST00000436712 SECISBP2LQ93073 1101 aaKnown RBP10.39□□□□□ -0.75
GAPVD1-209ENST00000436712 ZNF830Q96NB3 372 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-209ENST00000436712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
GAPVD1-209ENST00000436712 ABCC5O15440 1437 aa10.38□□□□□ -0.75
GAPVD1-209ENST00000436712 SAMD9LQ8IVG5 1584 aa10.38□□□□□ -0.75
GAPVD1-209ENST00000436712 DNMT1P26358 1616 aaKnown RBP10.38□□□□□ -0.75
GAPVD1-209ENST00000436712 HIRIP3Q9BW71 556 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-209ENST00000436712 TULP1O00294 542 aaPredicted RBP10.37□□□□□ -0.75
GAPVD1-209ENST00000436712 SYCP2Q9BX26 1530 aa10.37□□□□□ -0.75
GAPVD1-209ENST00000436712 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-209ENST00000436712 KDM6BO15054 1643 aa10.36□□□□□ -0.75
GAPVD1-209ENST00000436712 TCERG1O14776 1098 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-209ENST00000436712 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
GAPVD1-209ENST00000436712 NAIPQ13075 1403 aa10.35□□□□□ -0.75
GAPVD1-209ENST00000436712 VGFO15240 615 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-209ENST00000436712 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-209ENST00000436712 PDE4AP27815 886 aa10.34□□□□□ -0.75
GAPVD1-209ENST00000436712 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
GAPVD1-209ENST00000436712 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
GAPVD1-209ENST00000436712 DMTNQ08495 405 aa10.33□□□□□ -0.76
GAPVD1-209ENST00000436712 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
GAPVD1-209ENST00000436712 FRAT2O75474 233 aaPredicted RBP10.33□□□□□ -0.76
GAPVD1-209ENST00000436712 PPP4R3BQ5MIZ7 849 aa10.33□□□□□ -0.76
GAPVD1-209ENST00000436712 PLCH2O75038 1416 aa10.32□□□□□ -0.76
GAPVD1-209ENST00000436712 ARHGEF12Q9NZN5 1544 aa10.32□□□□□ -0.76
GAPVD1-209ENST00000436712 ABCA9Q8IUA7 1624 aa10.32□□□□□ -0.76
GAPVD1-209ENST00000436712 EFCAB2Q5VUJ9 269 aa10.31□□□□□ -0.76
GAPVD1-209ENST00000436712 RNF216Q9NWF9 866 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-209ENST00000436712 GCC2Q8IWJ2 1684 aa10.31□□□□□ -0.76
GAPVD1-209ENST00000436712 C9orf84Q5VXU9 1444 aa10.31□□□□□ -0.76
GAPVD1-209ENST00000436712 MS4A1P11836 297 aa10.31□□□□□ -0.76
GAPVD1-209ENST00000436712 PLPPR3Q6T4P5 718 aa10.31□□□□□ -0.76
GAPVD1-209ENST00000436712 ADGBQ8N7X0 1667 aa10.31□□□□□ -0.76
GAPVD1-209ENST00000436712 FANCAO15360 1455 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 AKNAQ7Z591 1439 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 TSPOAP1O95153 1857 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
GAPVD1-209ENST00000436712 CD109Q6YHK3 1445 aa10.29□□□□□ -0.76
GAPVD1-209ENST00000436712 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
GAPVD1-209ENST00000436712 VGLL3A8MV65 326 aa10.29□□□□□ -0.76
GAPVD1-209ENST00000436712 AFAP1Q8N556 730 aa10.29□□□□□ -0.76
GAPVD1-209ENST00000436712 KIF20AO95235 890 aa10.28□□□□□ -0.76
GAPVD1-209ENST00000436712 TNNT2P45379 298 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-209ENST00000436712 FAM69CQ0P6D2 419 aa10.28□□□□□ -0.76
GAPVD1-209ENST00000436712 ABCC1P33527 1531 aa10.28□□□□□ -0.76
GAPVD1-209ENST00000436712 MTERF4Q7Z6M4 381 aaKnown RBP10.28□□□□□ -0.76
GAPVD1-209ENST00000436712 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
GAPVD1-209ENST00000436712 NCOA1Q15788 1441 aa10.27□□□□□ -0.76
GAPVD1-209ENST00000436712 ESPNB1AK53 854 aa10.27□□□□□ -0.77
GAPVD1-209ENST00000436712 TERF1P54274 439 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms