RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 NCOA1Q15788 1441 aa26.56■■□□□ 1.84
CTDSP1-203ENST00000431127 ZMYM3Q14202 1370 aa26.56■■□□□ 1.84
CTDSP1-203ENST00000431127 ERBINQ96RT1 1412 aa26.55■■□□□ 1.84
CTDSP1-203ENST00000431127 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
CTDSP1-203ENST00000431127 EIF2AK4Q9P2K8 1649 aaKnown RBP26.54■■□□□ 1.84
CTDSP1-203ENST00000431127 FAM135AQ9P2D6 1515 aa26.54■■□□□ 1.84
CTDSP1-203ENST00000431127 MROH2AA6NES4 1674 aa26.53■■□□□ 1.84
CTDSP1-203ENST00000431127 RRBP1Q9P2E9 1410 aaKnown RBP26.52■■□□□ 1.84
CTDSP1-203ENST00000431127 WASHC2CQ9Y4E1 1318 aa26.52■■□□□ 1.84
CTDSP1-203ENST00000431127 C3P01024 1663 aa26.5■■□□□ 1.83
CTDSP1-203ENST00000431127 CLTCQ00610 1675 aaKnown RBP26.5■■□□□ 1.83
CTDSP1-203ENST00000431127 RNF17Q9BXT8 1623 aaKnown RBP26.49■■□□□ 1.83
CTDSP1-203ENST00000431127 KDM5DQ9BY66 1539 aa26.49■■□□□ 1.83
CTDSP1-203ENST00000431127 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
CTDSP1-203ENST00000431127 ROCK1Q13464 1354 aa26.47■■□□□ 1.83
CTDSP1-203ENST00000431127 NPATQ14207 1427 aa26.47■■□□□ 1.83
CTDSP1-203ENST00000431127 ITGAEP38570 1179 aa26.46■■□□□ 1.83
CTDSP1-203ENST00000431127 SETD1BQ9UPS6 1966 aaKnown RBP26.46■■□□□ 1.83
CTDSP1-203ENST00000431127 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
CTDSP1-203ENST00000431127 ANKRD50Q9ULJ7 1429 aa26.41■■□□□ 1.82
CTDSP1-203ENST00000431127 PREX1Q8TCU6 1659 aa26.4■■□□□ 1.82
CTDSP1-203ENST00000431127 KANK1Q14678 1352 aa26.39■■□□□ 1.82
CTDSP1-203ENST00000431127 DMRT2Q9Y5R5 561 aa26.39■■□□□ 1.82
CTDSP1-203ENST00000431127 MROH1Q8NDA8 1641 aa26.39■■□□□ 1.81
CTDSP1-203ENST00000431127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.38■■□□□ 1.818e-17■□□□□ 11.2
CTDSP1-203ENST00000431127 ABCC3O15438 1527 aa26.38■■□□□ 1.81
CTDSP1-203ENST00000431127 PRDM15P57071 1507 aaPredicted RBP26.38■■□□□ 1.81
CTDSP1-203ENST00000431127 ZC3H13Q5T200 1668 aaKnown RBP26.38■■□□□ 1.81
CTDSP1-203ENST00000431127 CERKQ8TCT0 537 aa26.37■■□□□ 1.81
CTDSP1-203ENST00000431127 PZPP20742 1482 aa26.36■■□□□ 1.81
CTDSP1-203ENST00000431127 DEPDC5O75140 1603 aa26.35■■□□□ 1.81
CTDSP1-203ENST00000431127 FBXO31Q5XUX0 539 aaPredicted RBP26.31■■□□□ 1.8
CTDSP1-203ENST00000431127 TNRQ92752 1358 aa26.29■■□□□ 1.8
CTDSP1-203ENST00000431127 ARHGAP31Q2M1Z3 1444 aa26.27■■□□□ 1.8
CTDSP1-203ENST00000431127 STRCQ7RTU9 1775 aa26.26■■□□□ 1.79
CTDSP1-203ENST00000431127 CEP152O94986 1710 aa26.26■■□□□ 1.79
CTDSP1-203ENST00000431127 VWDEQ8N2E2 1590 aa26.26■■□□□ 1.79
CTDSP1-203ENST00000431127 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
CTDSP1-203ENST00000431127 LMTK2Q8IWU2 1503 aa26.25■■□□□ 1.79
CTDSP1-203ENST00000431127 MYO3AQ8NEV4 1616 aa26.22■■□□□ 1.79
CTDSP1-203ENST00000431127 ERVK-7P63135 1459 aa26.21■■□□□ 1.79
CTDSP1-203ENST00000431127 NLRP1Q9C000 1473 aa26.2■■□□□ 1.78
CTDSP1-203ENST00000431127 PTPRTO14522 1441 aa26.2■■□□□ 1.78
CTDSP1-203ENST00000431127 UNC13BO14795 1591 aa26.2■■□□□ 1.78
CTDSP1-203ENST00000431127 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.78
CTDSP1-203ENST00000431127 CEP170BQ9Y4F5 1589 aaPredicted RBP26.2■■□□□ 1.78
CTDSP1-203ENST00000431127 A2ML1A8K2U0 1454 aa26.19■■□□□ 1.78
CTDSP1-203ENST00000431127 HFM1A2PYH4 1435 aa26.18■■□□□ 1.78
CTDSP1-203ENST00000431127 NAIPQ13075 1403 aa26.18■■□□□ 1.78
CTDSP1-203ENST00000431127 ZNF142P52746 1687 aaPredicted RBP26.18■■□□□ 1.78
CTDSP1-203ENST00000431127 NUP155O75694 1391 aa26.16■■□□□ 1.78
CTDSP1-203ENST00000431127 EFCAB6Q5THR3 1501 aa26.15■■□□□ 1.78
CTDSP1-203ENST00000431127 RPRD2Q5VT52 1461 aaKnown RBP26.13■■□□□ 1.77
CTDSP1-203ENST00000431127 THEMISQ8N1K5 641 aaPredicted RBP26.12■■□□□ 1.77
CTDSP1-203ENST00000431127 GCC2Q8IWJ2 1684 aa26.11■■□□□ 1.77
CTDSP1-203ENST00000431127 PLA2R1Q13018 1463 aa26.11■■□□□ 1.77
CTDSP1-203ENST00000431127 TET3O43151 1660 aa26.1■■□□□ 1.77
CTDSP1-203ENST00000431127 IQGAP3Q86VI3 1631 aa26.1■■□□□ 1.77
CTDSP1-203ENST00000431127 CFAP65Q6ZU64 1925 aaKnown RBP26.09■■□□□ 1.77
CTDSP1-203ENST00000431127 PKD2Q13563 968 aa26.08■■□□□ 1.77
CTDSP1-203ENST00000431127 NCKAP5LQ9HCH0 1330 aa26.08■■□□□ 1.77
CTDSP1-203ENST00000431127 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
CTDSP1-203ENST00000431127 NOS1P29475 1434 aa26.06■■□□□ 1.76
CTDSP1-203ENST00000431127 SLC52A1Q9NWF4 448 aa26.04■■□□□ 1.76
CTDSP1-203ENST00000431127 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
CTDSP1-203ENST00000431127 ACIN1Q9UKV3 1341 aaKnown RBP26■■□□□ 1.75
CTDSP1-203ENST00000431127 IDI1Q13907 227 aa26■■□□□ 1.75
CTDSP1-203ENST00000431127 ANKLE2Q86XL3 938 aa26■■□□□ 1.75
CTDSP1-203ENST00000431127 STAG3Q9UJ98 1225 aa26■■□□□ 1.75
CTDSP1-203ENST00000431127 LTBP4Q8N2S1 1624 aa25.99■■□□□ 1.75
CTDSP1-203ENST00000431127 SYNMO15061 1565 aa25.99■■□□□ 1.75
CTDSP1-203ENST00000431127 E9PCH4 1651 aa25.97■■□□□ 1.75
CTDSP1-203ENST00000431127 SETD5Q9C0A6 1442 aa25.94■■□□□ 1.74
CTDSP1-203ENST00000431127 UBR1Q8IWV7 1749 aa25.94■■□□□ 1.74
CTDSP1-203ENST00000431127 PIK3C2BO00750 1634 aa25.92■■□□□ 1.74
CTDSP1-203ENST00000431127 SLC4A1APQ9BWU0 796 aaKnown RBP25.92■■□□□ 1.74
CTDSP1-203ENST00000431127 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
CTDSP1-203ENST00000431127 ZNF335Q9H4Z2 1342 aaPredicted RBP25.91■■□□□ 1.74
CTDSP1-203ENST00000431127 EID1Q9Y6B2 187 aa25.9■■□□□ 1.74
CTDSP1-203ENST00000431127 IQSEC2Q5JU85 1478 aa25.9■■□□□ 1.74
CTDSP1-203ENST00000431127 TMEM2Q9UHN6 1383 aa25.89■■□□□ 1.74
CTDSP1-203ENST00000431127 SLIT1O75093 1534 aa25.88■■□□□ 1.73
CTDSP1-203ENST00000431127 ARHGAP23Q9P227 1491 aa25.88■■□□□ 1.73
CTDSP1-203ENST00000431127 POLR1AO95602 1720 aaPredicted RBP25.88■■□□□ 1.73
CTDSP1-203ENST00000431127 MED14O60244 1454 aa25.87■■□□□ 1.73
CTDSP1-203ENST00000431127 ADGRB3O60242 1522 aa25.87■■□□□ 1.73
CTDSP1-203ENST00000431127 TXNDC2Q86VQ3 553 aa25.86■■□□□ 1.73
CTDSP1-203ENST00000431127 NPHP4O75161 1426 aaPredicted RBP25.85■■□□□ 1.73
CTDSP1-203ENST00000431127 NEURL4Q96JN8 1562 aa25.85■■□□□ 1.73
CTDSP1-203ENST00000431127 SCAF11Q99590 1463 aaKnown RBP25.85■■□□□ 1.73
CTDSP1-203ENST00000431127 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
CTDSP1-203ENST00000431127 CHGAP10645 457 aaKnown RBP25.82■■□□□ 1.72
CTDSP1-203ENST00000431127 LTKP29376 864 aa25.82■■□□□ 1.72
CTDSP1-203ENST00000431127 HDGFP51858 240 aaKnown RBP25.82■■□□□ 1.72
CTDSP1-203ENST00000431127 SPHKAPQ2M3C7 1700 aa25.81■■□□□ 1.72
CTDSP1-203ENST00000431127 MPHOSPH9Q99550 1183 aa25.81■■□□□ 1.72
CTDSP1-203ENST00000431127 HRCP23327 699 aa25.8■■□□□ 1.72
CTDSP1-203ENST00000431127 TMEM131LA2VDJ0 1609 aa25.78■■□□□ 1.72
CTDSP1-203ENST00000431127 UBAP1LF5GYI3 381 aa25.78■■□□□ 1.72
CTDSP1-203ENST00000431127 TRPM2O94759 1503 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms