RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 KIF16BQ96L93 1317 aa7.69□□□□□ -1.18
CHD8-202ENST00000430710 FMN1Q68DA7 1419 aa7.69□□□□□ -1.18
CHD8-202ENST00000430710 SMARCA2P51531 1590 aa7.68□□□□□ -1.18
CHD8-202ENST00000430710 GPS2Q13227 327 aa7.68□□□□□ -1.18
CHD8-202ENST00000430710 DHX57Q6P158 1386 aaKnown RBP7.68□□□□□ -1.18
CHD8-202ENST00000430710 CENPJQ9HC77 1338 aaPredicted RBP7.68□□□□□ -1.18
CHD8-202ENST00000430710 G3V3G9 751 aa7.68□□□□□ -1.18
CHD8-202ENST00000430710 TEX35Q5T0J7 233 aa7.68□□□□□ -1.18
CHD8-202ENST00000430710 DCAF8Q5TAQ9 597 aa7.68□□□□□ -1.18
CHD8-202ENST00000430710 TMX4Q9H1E5 349 aaPredicted RBP7.68□□□□□ -1.18
CHD8-202ENST00000430710 CHMP4AQ9BY43 222 aa7.67□□□□□ -1.18
CHD8-202ENST00000430710 GNL2Q13823 731 aaKnown RBP7.67□□□□□ -1.18
CHD8-202ENST00000430710 CCDC34Q96HJ3 373 aa7.67□□□□□ -1.18
CHD8-202ENST00000430710 CHMP5Q9NZZ3 219 aa7.67□□□□□ -1.18
CHD8-202ENST00000430710 NFKBIBQ15653 356 aa7.67□□□□□ -1.18
CHD8-202ENST00000430710 STK26Q9P289 416 aa7.67□□□□□ -1.18
CHD8-202ENST00000430710 ISY1Q9ULR0 285 aaKnown RBP7.67□□□□□ -1.18
CHD8-202ENST00000430710 MYBBP1AQ9BQG0 1328 aaKnown RBP7.67□□□□□ -1.18
CHD8-202ENST00000430710 SLC4A3P48751 1232 aa7.66□□□□□ -1.18
CHD8-202ENST00000430710 NOC3LQ8WTT2 800 aaKnown RBP7.66□□□□□ -1.18
CHD8-202ENST00000430710 ABCC8Q09428 1581 aa7.66□□□□□ -1.18
CHD8-202ENST00000430710 ATP6V1DQ9Y5K8 247 aa7.66□□□□□ -1.18
CHD8-202ENST00000430710 MRE11P49959 708 aa7.66□□□□□ -1.18
CHD8-202ENST00000430710 AAMPQ13685 434 aa7.66□□□□□ -1.18
CHD8-202ENST00000430710 MPHOSPH9Q99550 1183 aa7.66□□□□□ -1.18
CHD8-202ENST00000430710 SMC4Q9NTJ3 1288 aa7.65□□□□□ -1.18
CHD8-202ENST00000430710 HMMRO75330 724 aa7.65□□□□□ -1.19
CHD8-202ENST00000430710 CGNL1Q0VF96 1302 aa7.65□□□□□ -1.19
CHD8-202ENST00000430710 HDGFP51858 240 aaKnown RBP7.64□□□□□ -1.19
CHD8-202ENST00000430710 EXOC6Q8TAG9 804 aa7.64□□□□□ -1.19
CHD8-202ENST00000430710 CARMIL1Q5VZK9 1371 aa7.64□□□□□ -1.19
CHD8-202ENST00000430710 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
CHD8-202ENST00000430710 PRKRIP1Q9H875 184 aaPredicted RBP7.64□□□□□ -1.19
CHD8-202ENST00000430710 KANK1Q14678 1352 aa7.64□□□□□ -1.19
CHD8-202ENST00000430710 GOLGA6L19H0YKK7 550 aa7.64□□□□□ -1.19
CHD8-202ENST00000430710 FOXD4L1Q9NU39 408 aa7.64□□□□□ -1.19
CHD8-202ENST00000430710 PAXIP1Q6ZW49 1069 aaPredicted RBP7.64□□□□□ -1.19
CHD8-202ENST00000430710 CRBNQ96SW2 442 aa7.64□□□□□ -1.19
CHD8-202ENST00000430710 SYTL4Q96C24 671 aaPredicted RBP7.64□□□□□ -1.19
CHD8-202ENST00000430710 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
CHD8-202ENST00000430710 KIF3AQ9Y496 699 aa7.63□□□□□ -1.19
CHD8-202ENST00000430710 EIF3AQ14152 1382 aaKnown RBP7.63□□□□□ -1.19
CHD8-202ENST00000430710 NOM1Q5C9Z4 860 aaKnown RBP7.63□□□□□ -1.19
CHD8-202ENST00000430710 DIAPH3Q9NSV4 1193 aa7.63□□□□□ -1.19
CHD8-202ENST00000430710 RRP9O43818 475 aaKnown RBP7.63□□□□□ -1.19
CHD8-202ENST00000430710 TPM3P06753 285 aa7.63□□□□□ -1.19
CHD8-202ENST00000430710 APBB1O00213 710 aa7.63□□□□□ -1.19
CHD8-202ENST00000430710 CCDC66A2RUB6 948 aa7.62□□□□□ -1.19
CHD8-202ENST00000430710 U2AF1L5P0DN76 240 aaPredicted RBP7.62□□□□□ -1.19
CHD8-202ENST00000430710 U2AF1Q01081 240 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD8-202ENST00000430710 PKD2Q13563 968 aa7.62□□□□□ -1.19
CHD8-202ENST00000430710 TRIM6-TRIM34B2RNG4 842 aa7.62□□□□□ -1.19
CHD8-202ENST00000430710 RTF1Q92541 710 aaKnown RBP7.62□□□□□ -1.19
CHD8-202ENST00000430710 SRPK2P78362 688 aaKnown RBP7.62□□□□□ -1.19
CHD8-202ENST00000430710 KRI1Q8N9T8 703 aaKnown RBP7.62□□□□□ -1.19
CHD8-202ENST00000430710 CCDC88BA6NC98 1476 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 NUCB2P80303 420 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 EID1Q9Y6B2 187 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 CCDC39Q9UFE4 941 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 HDAC5Q9UQL6 1122 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 E9PSI1 815 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 NASPP49321 788 aaPredicted RBP7.61□□□□□ -1.19
CHD8-202ENST00000430710 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
CHD8-202ENST00000430710 BECN2A8MW95 431 aa7.6□□□□□ -1.19
CHD8-202ENST00000430710 CCDC70Q6NSX1 233 aa7.6□□□□□ -1.19
CHD8-202ENST00000430710 BRPF3Q9ULD4 1205 aa7.6□□□□□ -1.19
CHD8-202ENST00000430710 CHMP4CQ96CF2 233 aa7.6□□□□□ -1.19
CHD8-202ENST00000430710 R3HCC1Q9Y3T6 440 aaKnown RBP7.6□□□□□ -1.19
CHD8-202ENST00000430710 CUX2O14529 1486 aa7.6□□□□□ -1.19
CHD8-202ENST00000430710 RSPH4AQ5TD94 716 aa7.6□□□□□ -1.19
CHD8-202ENST00000430710 CLUAP1Q96AJ1 413 aa7.6□□□□□ -1.19
CHD8-202ENST00000430710 ARGLU1Q9NWB6 273 aaPredicted RBP7.59□□□□□ -1.19
CHD8-202ENST00000430710 HDGFL2Q7Z4V5 671 aaPredicted RBP7.59□□□□□ -1.19
CHD8-202ENST00000430710 HMGN5P82970 282 aaKnown RBP7.59□□□□□ -1.19
CHD8-202ENST00000430710 CWC15Q9P013 229 aaKnown RBP7.59□□□□□ -1.19
CHD8-202ENST00000430710 PLIN1O60240 522 aa7.59□□□□□ -1.19
CHD8-202ENST00000430710 HSP90B1P14625 803 aaKnown RBP7.59□□□□□ -1.19
CHD8-202ENST00000430710 REC8O95072 547 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 CCDC173Q0VFZ6 552 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 ZNF592Q92610 1267 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 GRM1Q13255 1194 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 UNC13AQ9UPW8 1703 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 SF3A1Q15459 793 aaKnown RBP7.58□□□□□ -1.2
CHD8-202ENST00000430710 FOXD4L5Q5VV16 416 aaPredicted RBP7.58□□□□□ -1.2
CHD8-202ENST00000430710 FOXD4L4Q8WXT5 416 aaPredicted RBP7.58□□□□□ -1.2
CHD8-202ENST00000430710 CCDC146Q8IYE0 955 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 TRAK2O60296 914 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 STAC3Q96MF2 364 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 ANKRD30AQ9BXX3 1397 aa7.58□□□□□ -1.2
CHD8-202ENST00000430710 CALRP27797 417 aaKnown RBP7.57□□□□□ -1.2
CHD8-202ENST00000430710 LMOD3Q0VAK6 560 aa7.57□□□□□ -1.2
CHD8-202ENST00000430710 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
CHD8-202ENST00000430710 TPM1P09493 284 aa7.57□□□□□ -1.2
CHD8-202ENST00000430710 TSR1Q2NL82 804 aaKnown RBP7.57□□□□□ -1.2
CHD8-202ENST00000430710 ANKRD45Q5TZF3 282 aa7.57□□□□□ -1.2
CHD8-202ENST00000430710 NOL8Q76FK4 1167 aaKnown RBP7.57□□□□□ -1.2
CHD8-202ENST00000430710 CCAR2Q8N163 923 aaKnown RBP7.57□□□□□ -1.2
CHD8-202ENST00000430710 SPAG9O60271 1321 aaKnown RBP7.57□□□□□ -1.2
CHD8-202ENST00000430710 ACBD3Q9H3P7 528 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms