RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ISY1Q9ULR0 285 aaKnown RBP6.75□□□□□ -1.33
RIF1-203ENST00000428287 WDR62O43379 1518 aa6.75□□□□□ -1.33
RIF1-203ENST00000428287 PLXNC1O60486 1568 aa6.75□□□□□ -1.33
RIF1-203ENST00000428287 PBRM1Q86U86 1689 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 EIF4G3O43432 1585 aaKnown RBP6.74□□□□□ -1.33
RIF1-203ENST00000428287 LAMC3Q9Y6N6 1575 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 KIAA1107Q9UPP5 1409 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 PKNOX2Q96KN3 472 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 ABCC2Q92887 1545 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 IQGAP1P46940 1657 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 MYBBP1AQ9BQG0 1328 aaKnown RBP6.74□□□□□ -1.33
RIF1-203ENST00000428287 TUBGCP6Q96RT7 1819 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 C8orf34Q49A92 452 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 EXOC6Q8TAG9 804 aa6.74□□□□□ -1.33
RIF1-203ENST00000428287 PTPRGP23470 1445 aa6.73□□□□□ -1.33
RIF1-203ENST00000428287 RNF17Q9BXT8 1623 aaKnown RBP6.73□□□□□ -1.33
RIF1-203ENST00000428287 GLIPR1L2Q4G1C9 344 aa6.73□□□□□ -1.33
RIF1-203ENST00000428287 KIAA1210Q9ULL0 1709 aa6.73□□□□□ -1.33
RIF1-203ENST00000428287 GPRASP1Q5JY77 1395 aa6.73□□□□□ -1.33
RIF1-203ENST00000428287 CENPQQ7L2Z9 268 aaPredicted RBP6.73□□□□□ -1.33
RIF1-203ENST00000428287 FAM161AQ3B820 660 aa6.73□□□□□ -1.33
RIF1-203ENST00000428287 KIAA0586Q9BVV6 1533 aa6.72□□□□□ -1.33
RIF1-203ENST00000428287 FRAT2O75474 233 aaPredicted RBP6.72□□□□□ -1.33
RIF1-203ENST00000428287 LAS1LQ9Y4W2 734 aaKnown RBP6.72□□□□□ -1.33
RIF1-203ENST00000428287 DAPK1P53355 1430 aa6.72□□□□□ -1.33
RIF1-203ENST00000428287 IQGAP2Q13576 1575 aa6.72□□□□□ -1.33
RIF1-203ENST00000428287 TARBP1Q13395 1621 aaKnown RBP6.72□□□□□ -1.33
RIF1-203ENST00000428287 PABPN1Q86U42 306 aaKnown RBP eCLIP6.72□□□□□ -1.33
RIF1-203ENST00000428287 ABCC10Q5T3U5 1492 aa6.72□□□□□ -1.33
RIF1-203ENST00000428287 ABCC5O15440 1437 aa6.72□□□□□ -1.33
RIF1-203ENST00000428287 ZMYND15Q9H091 742 aa6.72□□□□□ -1.33
RIF1-203ENST00000428287 MYOM1P52179 1685 aa6.72□□□□□ -1.33
RIF1-203ENST00000428287 RRAGDQ9NQL2 400 aaPredicted RBP6.71□□□□□ -1.33
RIF1-203ENST00000428287 DLG5Q8TDM6 1919 aa6.71□□□□□ -1.34
RIF1-203ENST00000428287 PRDM15P57071 1507 aaPredicted RBP6.71□□□□□ -1.34
RIF1-203ENST00000428287 TRMT2AQ8IZ69 625 aaKnown RBP6.7□□□□□ -1.34
RIF1-203ENST00000428287 CEP152O94986 1710 aa6.7□□□□□ -1.34
RIF1-203ENST00000428287 CDC42BPBQ9Y5S2 1711 aa6.69□□□□□ -1.34
RIF1-203ENST00000428287 FANCD2Q9BXW9 1451 aa6.69□□□□□ -1.34
RIF1-203ENST00000428287 SCAPERQ9BY12 1400 aa6.69□□□□□ -1.34
RIF1-203ENST00000428287 EIF5BO60841 1220 aaKnown RBP6.69□□□□□ -1.34
RIF1-203ENST00000428287 COL17A1Q9UMD9 1497 aaPredicted RBP6.69□□□□□ -1.34
RIF1-203ENST00000428287 NGEFQ8N5V2 710 aa6.69□□□□□ -1.34
RIF1-203ENST00000428287 NPC1L1Q9UHC9 1359 aa6.69□□□□□ -1.34
RIF1-203ENST00000428287 TERF1P54274 439 aa6.69□□□□□ -1.34
RIF1-203ENST00000428287 DUSP27Q5VZP5 1158 aa6.68□□□□□ -1.34
RIF1-203ENST00000428287 EIF3AQ14152 1382 aaKnown RBP6.68□□□□□ -1.34
RIF1-203ENST00000428287 SPHKAPQ2M3C7 1700 aa6.68□□□□□ -1.34
RIF1-203ENST00000428287 MAP2P11137 1827 aaKnown RBP6.67□□□□□ -1.34
RIF1-203ENST00000428287 MAPK8IP3Q9UPT6 1336 aa6.67□□□□□ -1.34
RIF1-203ENST00000428287 EIF2AK4Q9P2K8 1649 aaKnown RBP6.67□□□□□ -1.34
RIF1-203ENST00000428287 L1TD1Q5T7N2 865 aaKnown RBP6.67□□□□□ -1.34
RIF1-203ENST00000428287 RRP7BPQ9NSQ0 103 aa6.67□□□□□ -1.34
RIF1-203ENST00000428287 ATP10AO60312 1499 aa6.67□□□□□ -1.34
RIF1-203ENST00000428287 SHANK2Q9UPX8 1470 aa6.67□□□□□ -1.34
RIF1-203ENST00000428287 MYH8P13535 1937 aa6.67□□□□□ -1.34
RIF1-203ENST00000428287 XRCC6P12956 609 aaKnown RBP eCLIP6.67□□□□□ -1.348e-6■■□□□ 12.6
RIF1-203ENST00000428287 IBTKQ9P2D0 1353 aaPredicted RBP6.67□□□□□ -1.34
RIF1-203ENST00000428287 PDCL3Q9H2J4 239 aa6.66□□□□□ -1.34
RIF1-203ENST00000428287 PNNQ9H307 717 aaKnown RBP6.66□□□□□ -1.34
RIF1-203ENST00000428287 AAMPQ13685 434 aa6.66□□□□□ -1.34
RIF1-203ENST00000428287 POGKQ9P215 609 aa6.66□□□□□ -1.34
RIF1-203ENST00000428287 TESK2Q96S53 571 aa6.66□□□□□ -1.34
RIF1-203ENST00000428287 RAPGEF6Q8TEU7 1601 aa6.66□□□□□ -1.34
RIF1-203ENST00000428287 RAD54L2Q9Y4B4 1467 aa6.66□□□□□ -1.34
RIF1-203ENST00000428287 HSP90AA2PQ14568 343 aaPredicted RBP6.65□□□□□ -1.34
RIF1-203ENST00000428287 CDCA7LQ96GN5 454 aa6.65□□□□□ -1.34
RIF1-203ENST00000428287 SLC4A1APQ9BWU0 796 aaKnown RBP6.65□□□□□ -1.34
RIF1-203ENST00000428287 CAMSAP2Q08AD1 1489 aa6.65□□□□□ -1.34
RIF1-203ENST00000428287 ESPNB1AK53 854 aa6.65□□□□□ -1.34
RIF1-203ENST00000428287 NCOA3Q9Y6Q9 1424 aa6.65□□□□□ -1.34
RIF1-203ENST00000428287 PRAG1Q86YV5 1406 aa6.65□□□□□ -1.35
RIF1-203ENST00000428287 WDR7Q9Y4E6 1490 aa6.65□□□□□ -1.35
RIF1-203ENST00000428287 GPATCH8Q9UKJ3 1502 aaKnown RBP6.65□□□□□ -1.35
RIF1-203ENST00000428287 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 CDK13Q14004 1512 aaKnown RBP6.64□□□□□ -1.35
RIF1-203ENST00000428287 UNC13BO14795 1591 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 NPM2Q86SE8 214 aaKnown RBP6.64□□□□□ -1.35
RIF1-203ENST00000428287 CRBNQ96SW2 442 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 KIF1BO60333 1816 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 ARHGEF5Q12774 1597 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 P3H3Q8IVL6 736 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 SHPRHQ149N8 1683 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 SYNMO15061 1565 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 TBC1D32Q96NH3 1257 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 PIK3C2GO75747 1445 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 IQGAP3Q86VI3 1631 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 RTEL1-TNFRSF6BF6WH68 1400 aa6.64□□□□□ -1.35
RIF1-203ENST00000428287 MCM4P33991 863 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 NINLQ9Y2I6 1382 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 IFT172Q9UG01 1749 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 FOXD1Q16676 465 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 CLEC17AQ6ZS10 378 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 SYNJ2O15056 1496 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 NKTRP30414 1462 aaKnown RBP6.63□□□□□ -1.35
RIF1-203ENST00000428287 PLEKHH1Q9ULM0 1364 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 C20orf194Q5TEA3 1177 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 MYH16Q9H6N6 1097 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 NUP153P49790 1475 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms