RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TPM2P07951 284 aa7.38□□□□□ -1.23
VTI1BP4-201ENST00000427516 TMEM121BQ9BXQ6 578 aaPredicted RBP7.38□□□□□ -1.23
VTI1BP4-201ENST00000427516 ISY1Q9ULR0 285 aaKnown RBP7.38□□□□□ -1.23
VTI1BP4-201ENST00000427516 RGL2O15211 777 aa7.37□□□□□ -1.23
VTI1BP4-201ENST00000427516 CALD1Q05682 793 aaKnown RBP7.37□□□□□ -1.23
VTI1BP4-201ENST00000427516 MS4A4AQ96JQ5 239 aa7.37□□□□□ -1.23
VTI1BP4-201ENST00000427516 MAPKBP1O60336 1514 aa7.37□□□□□ -1.23
VTI1BP4-201ENST00000427516 SETD5Q9C0A6 1442 aa7.36□□□□□ -1.23
VTI1BP4-201ENST00000427516 KCNH8Q96L42 1107 aa7.36□□□□□ -1.23
VTI1BP4-201ENST00000427516 BCL11BQ9C0K0 894 aaPredicted RBP7.36□□□□□ -1.23
VTI1BP4-201ENST00000427516 PDCL3Q9H2J4 239 aa7.36□□□□□ -1.23
VTI1BP4-201ENST00000427516 PCDH10Q9P2E7 1040 aa7.36□□□□□ -1.23
VTI1BP4-201ENST00000427516 PHF8Q9UPP1 1060 aa7.36□□□□□ -1.23
VTI1BP4-201ENST00000427516 WDR97A6NE52 1622 aa7.36□□□□□ -1.23
VTI1BP4-201ENST00000427516 TONSLQ96HA7 1378 aa7.35□□□□□ -1.23
VTI1BP4-201ENST00000427516 SNPHO15079 494 aa7.35□□□□□ -1.23
VTI1BP4-201ENST00000427516 B4GALNT3Q6L9W6 998 aa7.35□□□□□ -1.23
VTI1BP4-201ENST00000427516 TAOK2Q9UL54 1235 aa7.35□□□□□ -1.23
VTI1BP4-201ENST00000427516 BRPF3Q9ULD4 1205 aa7.35□□□□□ -1.23
VTI1BP4-201ENST00000427516 SOGA1O94964 1423 aa7.35□□□□□ -1.23
VTI1BP4-201ENST00000427516 TNNT2P45379 298 aaPredicted RBP7.34□□□□□ -1.23
VTI1BP4-201ENST00000427516 PDE4CQ08493 712 aa7.34□□□□□ -1.23
VTI1BP4-201ENST00000427516 NAP1L5Q96NT1 182 aaPredicted RBP7.34□□□□□ -1.23
VTI1BP4-201ENST00000427516 RAB3GAP2Q9H2M9 1393 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 SYNJ1O43426 1573 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 MROH2BQ7Z745 1585 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 RNF123Q5XPI4 1314 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 G3V3G9 751 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 CLCN1P35523 988 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 CNTLNQ9NXG0 1405 aa7.33□□□□□ -1.24
VTI1BP4-201ENST00000427516 WIZO95785 1651 aa7.32□□□□□ -1.24
VTI1BP4-201ENST00000427516 NCOA2Q15596 1464 aa7.32□□□□□ -1.24
VTI1BP4-201ENST00000427516 FGD1P98174 961 aa7.32□□□□□ -1.24
VTI1BP4-201ENST00000427516 NFKBIBQ15653 356 aa7.32□□□□□ -1.24
VTI1BP4-201ENST00000427516 FBXO22Q8NEZ5 403 aa7.32□□□□□ -1.24
VTI1BP4-201ENST00000427516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.32□□□□□ -1.24
VTI1BP4-201ENST00000427516 STK25O00506 426 aa7.31□□□□□ -1.24
VTI1BP4-201ENST00000427516 TERF1P54274 439 aa7.31□□□□□ -1.24
VTI1BP4-201ENST00000427516 TAF7LQ5H9L4 462 aa7.31□□□□□ -1.24
VTI1BP4-201ENST00000427516 MICALL2Q8IY33 904 aa7.31□□□□□ -1.24
VTI1BP4-201ENST00000427516 PLSCR2Q9NRY7 297 aa7.31□□□□□ -1.24
VTI1BP4-201ENST00000427516 NUDCQ9Y266 331 aa7.31□□□□□ -1.24
VTI1BP4-201ENST00000427516 LAS1LQ9Y4W2 734 aaKnown RBP7.31□□□□□ -1.24
VTI1BP4-201ENST00000427516 IRX6P78412 446 aaPredicted RBP7.3□□□□□ -1.24
VTI1BP4-201ENST00000427516 FRAT1Q92837 279 aaPredicted RBP7.3□□□□□ -1.24
VTI1BP4-201ENST00000427516 TRIM44Q96DX7 344 aaPredicted RBP7.3□□□□□ -1.24
VTI1BP4-201ENST00000427516 MFRPQ9BY79 579 aa7.3□□□□□ -1.24
VTI1BP4-201ENST00000427516 BACH2Q9BYV9 841 aa7.3□□□□□ -1.24
VTI1BP4-201ENST00000427516 PDIA4P13667 645 aaKnown RBP7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 PTMSP20962 102 aa7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 PDE4AP27815 886 aa7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 NLRP6P59044 892 aa7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 AAMPQ13685 434 aa7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 BECN1Q14457 450 aa7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 TAF3Q5VWG9 929 aa7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 TMEM92Q6UXU6 159 aa7.29□□□□□ -1.24
VTI1BP4-201ENST00000427516 CCDC144AA2RUR9 1427 aa7.28□□□□□ -1.24
VTI1BP4-201ENST00000427516 ABCA5Q8WWZ7 1642 aa7.28□□□□□ -1.24
VTI1BP4-201ENST00000427516 HOXB3P14651 431 aaPredicted RBP7.28□□□□□ -1.24
VTI1BP4-201ENST00000427516 CNGB1Q14028 1251 aaPredicted RBP7.28□□□□□ -1.24
VTI1BP4-201ENST00000427516 CDAN1Q8IWY9 1227 aa7.28□□□□□ -1.24
VTI1BP4-201ENST00000427516 KTN1Q86UP2 1357 aaKnown RBP7.28□□□□□ -1.24
VTI1BP4-201ENST00000427516 RBM10P98175 930 aaKnown RBP7.27□□□□□ -1.25
VTI1BP4-201ENST00000427516 NPM2Q86SE8 214 aaKnown RBP7.27□□□□□ -1.25
VTI1BP4-201ENST00000427516 ANP32BQ92688 251 aaKnown RBP7.27□□□□□ -1.25
VTI1BP4-201ENST00000427516 MARVELD3Q96A59 401 aa7.27□□□□□ -1.25
VTI1BP4-201ENST00000427516 PDE3BQ13370 1112 aa7.26□□□□□ -1.25
VTI1BP4-201ENST00000427516 MRS2Q9HD23 443 aa7.26□□□□□ -1.25
VTI1BP4-201ENST00000427516 POLR1AO95602 1720 aaPredicted RBP7.25□□□□□ -1.25
VTI1BP4-201ENST00000427516 GOLGA6L3A6NEY3 463 aa7.25□□□□□ -1.25
VTI1BP4-201ENST00000427516 SMAP1Q8IYB5 467 aaPredicted RBP7.25□□□□□ -1.25
VTI1BP4-201ENST00000427516 CCDC18Q5T9S5 1454 aa7.24□□□□□ -1.25
VTI1BP4-201ENST00000427516 MRE11P49959 708 aa7.24□□□□□ -1.25
VTI1BP4-201ENST00000427516 ARXQ96QS3 562 aa7.24□□□□□ -1.25
VTI1BP4-201ENST00000427516 ARAP1Q96P48 1450 aa7.24□□□□□ -1.25
VTI1BP4-201ENST00000427516 EIF4G2P78344 907 aaKnown RBP eCLIP7.23□□□□□ -1.25
VTI1BP4-201ENST00000427516 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.23□□□□□ -1.25
VTI1BP4-201ENST00000427516 TIAM1Q13009 1591 aa7.22□□□□□ -1.25
VTI1BP4-201ENST00000427516 UACAQ9BZF9 1416 aa7.22□□□□□ -1.25
VTI1BP4-201ENST00000427516 POTEB3A0JP26 581 aa7.22□□□□□ -1.25
VTI1BP4-201ENST00000427516 CANXP27824 592 aaKnown RBP7.22□□□□□ -1.25
VTI1BP4-201ENST00000427516 UTP14CQ5TAP6 766 aaKnown RBP7.22□□□□□ -1.25
VTI1BP4-201ENST00000427516 POTEBQ6S5H4 581 aa7.22□□□□□ -1.25
VTI1BP4-201ENST00000427516 ZMYM4Q5VZL5 1548 aa7.22□□□□□ -1.25
VTI1BP4-201ENST00000427516 ROCK2O75116 1388 aaKnown RBP7.21□□□□□ -1.25
VTI1BP4-201ENST00000427516 INSRP06213 1382 aa7.21□□□□□ -1.25
VTI1BP4-201ENST00000427516 PRKRIP1Q9H875 184 aaPredicted RBP7.21□□□□□ -1.26
VTI1BP4-201ENST00000427516 PLEKHH2Q8IVE3 1493 aa7.21□□□□□ -1.26
VTI1BP4-201ENST00000427516 CECR2Q9BXF3 1484 aa7.21□□□□□ -1.26
VTI1BP4-201ENST00000427516 RAPGEF2Q9Y4G8 1499 aa7.21□□□□□ -1.26
VTI1BP4-201ENST00000427516 HOXB1P14653 301 aaPredicted RBP7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 EMP3P54852 163 aa7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 DOK7Q18PE1 504 aa7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 FAM161AQ3B820 660 aa7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 MYH16Q9H6N6 1097 aa7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 UPF2Q9HAU5 1272 aaKnown RBP7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 ZMYM3Q14202 1370 aa7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 PHLDB1Q86UU1 1377 aa7.2□□□□□ -1.26
VTI1BP4-201ENST00000427516 SCAPERQ9BY12 1400 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms