RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.29■■□□□ 1.326e-7■■■□□ 15
PHF1-203ENST00000427004 EIF2AK4Q9P2K8 1649 aaKnown RBP23.29■■□□□ 1.32
PHF1-203ENST00000427004 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
PHF1-203ENST00000427004 NAIPQ13075 1403 aa23.28■■□□□ 1.32
PHF1-203ENST00000427004 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
PHF1-203ENST00000427004 RNF17Q9BXT8 1623 aaKnown RBP23.28■■□□□ 1.32
PHF1-203ENST00000427004 ERBINQ96RT1 1412 aa23.26■■□□□ 1.31
PHF1-203ENST00000427004 CEBPAP49715 358 aaPredicted RBP23.25■■□□□ 1.31
PHF1-203ENST00000427004 DEPDC5O75140 1603 aa23.23■■□□□ 1.31
PHF1-203ENST00000427004 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
PHF1-203ENST00000427004 C3P01024 1663 aa23.2■■□□□ 1.3
PHF1-203ENST00000427004 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
PHF1-203ENST00000427004 UNC13BO14795 1591 aa23.18■■□□□ 1.3
PHF1-203ENST00000427004 PTPRMP28827 1452 aa23.18■■□□□ 1.3
PHF1-203ENST00000427004 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
PHF1-203ENST00000427004 ABCC3O15438 1527 aa23.17■■□□□ 1.3
PHF1-203ENST00000427004 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
PHF1-203ENST00000427004 KDM5DQ9BY66 1539 aa23.14■■□□□ 1.3
PHF1-203ENST00000427004 WASHC2CQ9Y4E1 1318 aa23.13■■□□□ 1.29
PHF1-203ENST00000427004 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
PHF1-203ENST00000427004 VWDEQ8N2E2 1590 aa23.12■■□□□ 1.29
PHF1-203ENST00000427004 ESF1Q9H501 851 aaKnown RBP23.12■■□□□ 1.29
PHF1-203ENST00000427004 SETD5Q9C0A6 1442 aa23.11■■□□□ 1.29
PHF1-203ENST00000427004 MROH2AA6NES4 1674 aa23.11■■□□□ 1.29
PHF1-203ENST00000427004 RAB3GAP2Q9H2M9 1393 aa23.11■■□□□ 1.29
PHF1-203ENST00000427004 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
PHF1-203ENST00000427004 ILDR1Q86SU0 546 aaPredicted RBP23.1■■□□□ 1.29
PHF1-203ENST00000427004 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
PHF1-203ENST00000427004 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
PHF1-203ENST00000427004 ZC3H13Q5T200 1668 aaKnown RBP23.09■■□□□ 1.29
PHF1-203ENST00000427004 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
PHF1-203ENST00000427004 NUP155O75694 1391 aa23.08■■□□□ 1.29
PHF1-203ENST00000427004 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
PHF1-203ENST00000427004 E9PCH4 1651 aa23.05■■□□□ 1.28
PHF1-203ENST00000427004 KANK1Q14678 1352 aa23.04■■□□□ 1.28
PHF1-203ENST00000427004 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
PHF1-203ENST00000427004 PZPP20742 1482 aa23.04■■□□□ 1.28
PHF1-203ENST00000427004 TET3O43151 1660 aa23.03■■□□□ 1.28
PHF1-203ENST00000427004 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
PHF1-203ENST00000427004 EFCAB6Q5THR3 1501 aa23.02■■□□□ 1.28
PHF1-203ENST00000427004 PREX1Q8TCU6 1659 aa23.01■■□□□ 1.27
PHF1-203ENST00000427004 NPATQ14207 1427 aa23■■□□□ 1.27
PHF1-203ENST00000427004 LMTK2Q8IWU2 1503 aa23■■□□□ 1.27
PHF1-203ENST00000427004 FOXD1Q16676 465 aa23■■□□□ 1.27
PHF1-203ENST00000427004 PPP6R1Q9UPN7 881 aa22.97■■□□□ 1.27
PHF1-203ENST00000427004 ERVK-7P63135 1459 aa22.95■■□□□ 1.26
PHF1-203ENST00000427004 UGGT1Q9NYU2 1555 aa22.95■■□□□ 1.26
PHF1-203ENST00000427004 MYO3AQ8NEV4 1616 aa22.94■■□□□ 1.26
PHF1-203ENST00000427004 SYNMO15061 1565 aa22.94■■□□□ 1.26
PHF1-203ENST00000427004 SPATA31D1Q6ZQQ2 1576 aa22.92■■□□□ 1.26
PHF1-203ENST00000427004 PKD2Q13563 968 aa22.91■■□□□ 1.26
PHF1-203ENST00000427004 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
PHF1-203ENST00000427004 TNRQ92752 1358 aa22.9■■□□□ 1.26
PHF1-203ENST00000427004 SPHKAPQ2M3C7 1700 aa22.89■■□□□ 1.26
PHF1-203ENST00000427004 HSPA2P54652 639 aa22.89■■□□□ 1.25
PHF1-203ENST00000427004 MPHOSPH9Q99550 1183 aa22.89■■□□□ 1.25
PHF1-203ENST00000427004 ARHGAP31Q2M1Z3 1444 aa22.89■■□□□ 1.25
PHF1-203ENST00000427004 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
PHF1-203ENST00000427004 LMTK3Q96Q04 1460 aa22.86■■□□□ 1.25
PHF1-203ENST00000427004 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
PHF1-203ENST00000427004 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
PHF1-203ENST00000427004 NOS1P29475 1434 aa22.84■■□□□ 1.25
PHF1-203ENST00000427004 PLA2R1Q13018 1463 aa22.83■■□□□ 1.25
PHF1-203ENST00000427004 CEP170BQ9Y4F5 1589 aaPredicted RBP22.83■■□□□ 1.25
PHF1-203ENST00000427004 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
PHF1-203ENST00000427004 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
PHF1-203ENST00000427004 ZNF142P52746 1687 aaPredicted RBP22.81■■□□□ 1.24
PHF1-203ENST00000427004 RPRD2Q5VT52 1461 aaKnown RBP22.79■■□□□ 1.24
PHF1-203ENST00000427004 IDI1Q13907 227 aa22.79■■□□□ 1.24
PHF1-203ENST00000427004 UBR1Q8IWV7 1749 aa22.79■■□□□ 1.24
PHF1-203ENST00000427004 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
PHF1-203ENST00000427004 A2ML1A8K2U0 1454 aa22.76■■□□□ 1.23
PHF1-203ENST00000427004 PTPRTO14522 1441 aa22.75■■□□□ 1.23
PHF1-203ENST00000427004 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
PHF1-203ENST00000427004 TRPM2O94759 1503 aa22.74■■□□□ 1.23
PHF1-203ENST00000427004 HRCP23327 699 aa22.73■■□□□ 1.23
PHF1-203ENST00000427004 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
PHF1-203ENST00000427004 NLRP1Q9C000 1473 aa22.72■■□□□ 1.23
PHF1-203ENST00000427004 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
PHF1-203ENST00000427004 STRCQ7RTU9 1775 aa22.71■■□□□ 1.23
PHF1-203ENST00000427004 ADGRB3O60242 1522 aa22.7■■□□□ 1.22
PHF1-203ENST00000427004 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
PHF1-203ENST00000427004 KIF1BO60333 1816 aa22.68■■□□□ 1.22
PHF1-203ENST00000427004 FBXO41Q8TF61 875 aa22.68■■□□□ 1.22
PHF1-203ENST00000427004 NCKAP5LQ9HCH0 1330 aa22.67■■□□□ 1.22
PHF1-203ENST00000427004 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
PHF1-203ENST00000427004 ANKRD30BQ9BXX2 1392 aa22.65■■□□□ 1.22
PHF1-203ENST00000427004 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
PHF1-203ENST00000427004 POLR1AO95602 1720 aaPredicted RBP22.62■■□□□ 1.21
PHF1-203ENST00000427004 SLC52A1Q9NWF4 448 aa22.62■■□□□ 1.21
PHF1-203ENST00000427004 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
PHF1-203ENST00000427004 NEURL4Q96JN8 1562 aa22.6■■□□□ 1.21
PHF1-203ENST00000427004 LTKP29376 864 aa22.6■■□□□ 1.21
PHF1-203ENST00000427004 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
PHF1-203ENST00000427004 ZNF326Q5BKZ1 582 aaKnown RBP22.58■■□□□ 1.21
PHF1-203ENST00000427004 KDM5AP29375 1690 aaKnown RBP22.58■■□□□ 1.2
PHF1-203ENST00000427004 THEMISQ8N1K5 641 aaPredicted RBP22.57■■□□□ 1.2
PHF1-203ENST00000427004 ARHGAP23Q9P227 1491 aa22.56■■□□□ 1.2
PHF1-203ENST00000427004 RIMS2Q9UQ26 1411 aa22.56■■□□□ 1.2
PHF1-203ENST00000427004 TMEM2Q9UHN6 1383 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms