RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 ADGRL2O95490 1459 aa18.95■□□□□ 0.62
SMIM12-203ENST00000426886 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
SMIM12-203ENST00000426886 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
SMIM12-203ENST00000426886 ERBINQ96RT1 1412 aa18.93■□□□□ 0.62
SMIM12-203ENST00000426886 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
SMIM12-203ENST00000426886 ROCK1Q13464 1354 aa18.92■□□□□ 0.62
SMIM12-203ENST00000426886 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
SMIM12-203ENST00000426886 FBXO31Q5XUX0 539 aaPredicted RBP18.89■□□□□ 0.61
SMIM12-203ENST00000426886 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
SMIM12-203ENST00000426886 EIF2AK4Q9P2K8 1649 aaKnown RBP18.85■□□□□ 0.61
SMIM12-203ENST00000426886 KANK1Q14678 1352 aa18.85■□□□□ 0.61
SMIM12-203ENST00000426886 HSPA2P54652 639 aa18.84■□□□□ 0.61
SMIM12-203ENST00000426886 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
SMIM12-203ENST00000426886 C3P01024 1663 aa18.83■□□□□ 0.6
SMIM12-203ENST00000426886 NAIPQ13075 1403 aa18.83■□□□□ 0.6
SMIM12-203ENST00000426886 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.6
SMIM12-203ENST00000426886 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.6
SMIM12-203ENST00000426886 ABCC3O15438 1527 aa18.81■□□□□ 0.6
SMIM12-203ENST00000426886 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
SMIM12-203ENST00000426886 NUP155O75694 1391 aa18.8■□□□□ 0.6
SMIM12-203ENST00000426886 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
SMIM12-203ENST00000426886 HFM1A2PYH4 1435 aa18.78■□□□□ 0.6
SMIM12-203ENST00000426886 CEP152O94986 1710 aa18.77■□□□□ 0.59
SMIM12-203ENST00000426886 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
SMIM12-203ENST00000426886 DEPDC5O75140 1603 aa18.75■□□□□ 0.59
SMIM12-203ENST00000426886 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
SMIM12-203ENST00000426886 PZPP20742 1482 aa18.75■□□□□ 0.59
SMIM12-203ENST00000426886 LMTK3Q96Q04 1460 aa18.75■□□□□ 0.59
SMIM12-203ENST00000426886 CFAP65Q6ZU64 1925 aaKnown RBP18.74■□□□□ 0.59
SMIM12-203ENST00000426886 TNRQ92752 1358 aa18.74■□□□□ 0.59
SMIM12-203ENST00000426886 NPATQ14207 1427 aa18.74■□□□□ 0.59
SMIM12-203ENST00000426886 FAM135AQ9P2D6 1515 aa18.72■□□□□ 0.59
SMIM12-203ENST00000426886 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
SMIM12-203ENST00000426886 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.59
SMIM12-203ENST00000426886 ZC3H13Q5T200 1668 aaKnown RBP18.7■□□□□ 0.58
SMIM12-203ENST00000426886 VWDEQ8N2E2 1590 aa18.7■□□□□ 0.58
SMIM12-203ENST00000426886 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
SMIM12-203ENST00000426886 UNC13BO14795 1591 aa18.68■□□□□ 0.58
SMIM12-203ENST00000426886 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
SMIM12-203ENST00000426886 ERVK-7P63135 1459 aa18.68■□□□□ 0.58
SMIM12-203ENST00000426886 GCC2Q8IWJ2 1684 aa18.68■□□□□ 0.58
SMIM12-203ENST00000426886 ARHGAP31Q2M1Z3 1444 aa18.67■□□□□ 0.58
SMIM12-203ENST00000426886 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
SMIM12-203ENST00000426886 PREX1Q8TCU6 1659 aa18.67■□□□□ 0.58
SMIM12-203ENST00000426886 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
SMIM12-203ENST00000426886 FOXD1Q16676 465 aa18.65■□□□□ 0.58
SMIM12-203ENST00000426886 EFCAB6Q5THR3 1501 aa18.65■□□□□ 0.58
SMIM12-203ENST00000426886 PKD2Q13563 968 aa18.65■□□□□ 0.58
SMIM12-203ENST00000426886 IDI1Q13907 227 aa18.65■□□□□ 0.58
SMIM12-203ENST00000426886 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
SMIM12-203ENST00000426886 SPATA31D1Q6ZQQ2 1576 aa18.63■□□□□ 0.57
SMIM12-203ENST00000426886 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
SMIM12-203ENST00000426886 CHGAP10645 457 aaKnown RBP18.62■□□□□ 0.57
SMIM12-203ENST00000426886 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
SMIM12-203ENST00000426886 IQGAP3Q86VI3 1631 aa18.62■□□□□ 0.57
SMIM12-203ENST00000426886 MPHOSPH9Q99550 1183 aa18.61■□□□□ 0.57
SMIM12-203ENST00000426886 NCKAP5LQ9HCH0 1330 aa18.61■□□□□ 0.57
SMIM12-203ENST00000426886 CEP170BQ9Y4F5 1589 aaPredicted RBP18.61■□□□□ 0.57
SMIM12-203ENST00000426886 TET3O43151 1660 aa18.6■□□□□ 0.57
SMIM12-203ENST00000426886 THEMISQ8N1K5 641 aaPredicted RBP18.6■□□□□ 0.57
SMIM12-203ENST00000426886 A2ML1A8K2U0 1454 aa18.6■□□□□ 0.57
SMIM12-203ENST00000426886 NOS1P29475 1434 aa18.59■□□□□ 0.57
SMIM12-203ENST00000426886 NLRP1Q9C000 1473 aa18.59■□□□□ 0.57
SMIM12-203ENST00000426886 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.56
SMIM12-203ENST00000426886 E9PCH4 1651 aa18.57■□□□□ 0.56
SMIM12-203ENST00000426886 UGGT1Q9NYU2 1555 aa18.57■□□□□ 0.56
SMIM12-203ENST00000426886 SLC52A1Q9NWF4 448 aa18.57■□□□□ 0.56
SMIM12-203ENST00000426886 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
SMIM12-203ENST00000426886 SYNMO15061 1565 aa18.56■□□□□ 0.56
SMIM12-203ENST00000426886 ANKLE2Q86XL3 938 aa18.53■□□□□ 0.56
SMIM12-203ENST00000426886 ZNF142P52746 1687 aaPredicted RBP18.51■□□□□ 0.55
SMIM12-203ENST00000426886 NUTM2DQ5VT03 806 aaPredicted RBP18.51■□□□□ 0.55
SMIM12-203ENST00000426886 TXNDC2Q86VQ3 553 aa18.51■□□□□ 0.55
SMIM12-203ENST00000426886 PIK3C2BO00750 1634 aa18.5■□□□□ 0.55
SMIM12-203ENST00000426886 LTKP29376 864 aa18.5■□□□□ 0.55
SMIM12-203ENST00000426886 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
SMIM12-203ENST00000426886 HRCP23327 699 aa18.48■□□□□ 0.55
SMIM12-203ENST00000426886 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
SMIM12-203ENST00000426886 PTPRTO14522 1441 aa18.48■□□□□ 0.55
SMIM12-203ENST00000426886 PLA2R1Q13018 1463 aa18.48■□□□□ 0.55
SMIM12-203ENST00000426886 STRCQ7RTU9 1775 aa18.48■□□□□ 0.55
SMIM12-203ENST00000426886 ZNF326Q5BKZ1 582 aaKnown RBP18.48■□□□□ 0.55
SMIM12-203ENST00000426886 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
SMIM12-203ENST00000426886 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
SMIM12-203ENST00000426886 TMEM2Q9UHN6 1383 aa18.46■□□□□ 0.55
SMIM12-203ENST00000426886 BCANQ96GW7 911 aa18.46■□□□□ 0.55
SMIM12-203ENST00000426886 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
SMIM12-203ENST00000426886 PPP1R15AO75807 674 aaPredicted RBP18.44■□□□□ 0.54
SMIM12-203ENST00000426886 SPHKAPQ2M3C7 1700 aa18.43■□□□□ 0.54
SMIM12-203ENST00000426886 RGL3Q3MIN7 710 aa18.43■□□□□ 0.54
SMIM12-203ENST00000426886 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
SMIM12-203ENST00000426886 TRPM2O94759 1503 aa18.41■□□□□ 0.54
SMIM12-203ENST00000426886 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
SMIM12-203ENST00000426886 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
SMIM12-203ENST00000426886 CLTCL1P53675 1640 aa18.4■□□□□ 0.54
SMIM12-203ENST00000426886 SLC26A8Q96RN1 970 aa18.39■□□□□ 0.54
SMIM12-203ENST00000426886 SCAF11Q99590 1463 aaKnown RBP18.39■□□□□ 0.54
SMIM12-203ENST00000426886 TMEM131LA2VDJ0 1609 aa18.39■□□□□ 0.53
SMIM12-203ENST00000426886 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.53
SMIM12-203ENST00000426886 HDGFP51858 240 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms