RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 SLC4A1APQ9BWU0 796 aaKnown RBP23.19■■□□□ 1.3
SCRN1-205ENST00000425819 UNC13BO14795 1591 aa23.19■■□□□ 1.3
SCRN1-205ENST00000425819 EIF2AK4Q9P2K8 1649 aaKnown RBP23.18■■□□□ 1.3
SCRN1-205ENST00000425819 ARHGEF40Q8TER5 1519 aa23.17■■□□□ 1.3
SCRN1-205ENST00000425819 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
SCRN1-205ENST00000425819 CLSPNQ9HAW4 1339 aa23.14■■□□□ 1.29
SCRN1-205ENST00000425819 FAM135AQ9P2D6 1515 aa23.13■■□□□ 1.29
SCRN1-205ENST00000425819 FOXD1Q16676 465 aa23.13■■□□□ 1.29
SCRN1-205ENST00000425819 DEPDC5O75140 1603 aa23.12■■□□□ 1.29
SCRN1-205ENST00000425819 GGT6Q6P531 493 aa23.12■■□□□ 1.29
SCRN1-205ENST00000425819 KANK1Q14678 1352 aa23.11■■□□□ 1.29
SCRN1-205ENST00000425819 PKD2Q13563 968 aa23.1■■□□□ 1.29
SCRN1-205ENST00000425819 REREQ9P2R6 1566 aa23.1■■□□□ 1.29
SCRN1-205ENST00000425819 IQGAP3Q86VI3 1631 aa23.09■■□□□ 1.29
SCRN1-205ENST00000425819 MROH1Q8NDA8 1641 aa23.09■■□□□ 1.29
SCRN1-205ENST00000425819 RNF17Q9BXT8 1623 aaKnown RBP23.09■■□□□ 1.29
SCRN1-205ENST00000425819 PRDM15P57071 1507 aaPredicted RBP23.09■■□□□ 1.29
SCRN1-205ENST00000425819 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.29
SCRN1-205ENST00000425819 AGLP35573 1532 aa23.06■■□□□ 1.28
SCRN1-205ENST00000425819 VWDEQ8N2E2 1590 aa23.05■■□□□ 1.28
SCRN1-205ENST00000425819 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
SCRN1-205ENST00000425819 SIGLEC1Q9BZZ2 1709 aa23.04■■□□□ 1.28
SCRN1-205ENST00000425819 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
SCRN1-205ENST00000425819 NEUROD1Q13562 356 aa23.01■■□□□ 1.27
SCRN1-205ENST00000425819 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
SCRN1-205ENST00000425819 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
SCRN1-205ENST00000425819 MLECQ14165 292 aa23■■□□□ 1.27
SCRN1-205ENST00000425819 WASHC2CQ9Y4E1 1318 aa23■■□□□ 1.27
SCRN1-205ENST00000425819 ABCC3O15438 1527 aa22.97■■□□□ 1.27
SCRN1-205ENST00000425819 LMTK2Q8IWU2 1503 aa22.97■■□□□ 1.27
SCRN1-205ENST00000425819 TET3O43151 1660 aa22.97■■□□□ 1.27
SCRN1-205ENST00000425819 CEP152O94986 1710 aa22.96■■□□□ 1.27
SCRN1-205ENST00000425819 E9PCH4 1651 aa22.93■■□□□ 1.26
SCRN1-205ENST00000425819 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
SCRN1-205ENST00000425819 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
SCRN1-205ENST00000425819 ZC3H13Q5T200 1668 aaKnown RBP22.89■■□□□ 1.26
SCRN1-205ENST00000425819 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
SCRN1-205ENST00000425819 CAMSAP1Q5T5Y3 1602 aa22.88■■□□□ 1.25
SCRN1-205ENST00000425819 NPATQ14207 1427 aa22.87■■□□□ 1.25
SCRN1-205ENST00000425819 ESF1Q9H501 851 aaKnown RBP22.86■■□□□ 1.25
SCRN1-205ENST00000425819 RPRD2Q5VT52 1461 aaKnown RBP22.85■■□□□ 1.25
SCRN1-205ENST00000425819 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
SCRN1-205ENST00000425819 CCDC144AA2RUR9 1427 aa22.84■■□□□ 1.25
SCRN1-205ENST00000425819 PTPRTO14522 1441 aa22.84■■□□□ 1.25
SCRN1-205ENST00000425819 CLTCQ00610 1675 aaKnown RBP22.83■■□□□ 1.25
SCRN1-205ENST00000425819 ARHGAP31Q2M1Z3 1444 aa22.83■■□□□ 1.25
SCRN1-205ENST00000425819 SPHKAPQ2M3C7 1700 aa22.81■■□□□ 1.24
SCRN1-205ENST00000425819 TRPM2O94759 1503 aa22.81■■□□□ 1.24
SCRN1-205ENST00000425819 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
SCRN1-205ENST00000425819 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
SCRN1-205ENST00000425819 NOS1P29475 1434 aa22.76■■□□□ 1.23
SCRN1-205ENST00000425819 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
SCRN1-205ENST00000425819 FBXO31Q5XUX0 539 aaPredicted RBP22.76■■□□□ 1.23
SCRN1-205ENST00000425819 L3MBTL2Q969R5 705 aa22.75■■□□□ 1.23
SCRN1-205ENST00000425819 UGGT1Q9NYU2 1555 aa22.75■■□□□ 1.23
SCRN1-205ENST00000425819 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
SCRN1-205ENST00000425819 CLTCL1P53675 1640 aa22.74■■□□□ 1.23
SCRN1-205ENST00000425819 ERVK-7P63135 1459 aa22.72■■□□□ 1.23
SCRN1-205ENST00000425819 SYNMO15061 1565 aa22.71■■□□□ 1.23
SCRN1-205ENST00000425819 PREX1Q8TCU6 1659 aa22.71■■□□□ 1.23
SCRN1-205ENST00000425819 FER1L4A9Z1Z3 1794 aa22.7■■□□□ 1.22
SCRN1-205ENST00000425819 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
SCRN1-205ENST00000425819 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
SCRN1-205ENST00000425819 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
SCRN1-205ENST00000425819 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
SCRN1-205ENST00000425819 SPATA31E1Q6ZUB1 1445 aa22.66■■□□□ 1.22
SCRN1-205ENST00000425819 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
SCRN1-205ENST00000425819 CHGAP10645 457 aaKnown RBP22.66■■□□□ 1.22
SCRN1-205ENST00000425819 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
SCRN1-205ENST00000425819 SPATA31D1Q6ZQQ2 1576 aa22.65■■□□□ 1.22
SCRN1-205ENST00000425819 IDI1Q13907 227 aa22.64■■□□□ 1.22
SCRN1-205ENST00000425819 SLC52A1Q9NWF4 448 aa22.64■■□□□ 1.22
SCRN1-205ENST00000425819 ADAMTSL3P82987 1691 aa22.64■■□□□ 1.21
SCRN1-205ENST00000425819 DCAF11Q8TEB1 546 aa22.63■■□□□ 1.21
SCRN1-205ENST00000425819 KDM2AQ9Y2K7 1162 aa22.63■■□□□ 1.21
SCRN1-205ENST00000425819 PIK3C2BO00750 1634 aa22.62■■□□□ 1.21
SCRN1-205ENST00000425819 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
SCRN1-205ENST00000425819 TNRQ92752 1358 aa22.61■■□□□ 1.21
SCRN1-205ENST00000425819 C3P01024 1663 aa22.6■■□□□ 1.21
SCRN1-205ENST00000425819 KIF1BO60333 1816 aa22.59■■□□□ 1.21
SCRN1-205ENST00000425819 ZNF326Q5BKZ1 582 aaKnown RBP22.59■■□□□ 1.21
SCRN1-205ENST00000425819 ADGRB3O60242 1522 aa22.59■■□□□ 1.21
SCRN1-205ENST00000425819 NBPF8Q3BBV2 869 aa22.57■■□□□ 1.2
SCRN1-205ENST00000425819 NEURL4Q96JN8 1562 aa22.57■■□□□ 1.2
SCRN1-205ENST00000425819 STAG3Q9UJ98 1225 aa22.55■■□□□ 1.2
SCRN1-205ENST00000425819 UHRF1BP1Q6BDS2 1440 aa22.51■■□□□ 1.19
SCRN1-205ENST00000425819 TMEM131LA2VDJ0 1609 aa22.51■■□□□ 1.19
SCRN1-205ENST00000425819 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
SCRN1-205ENST00000425819 RPGRIP1LQ68CZ1 1315 aa22.48■■□□□ 1.19
SCRN1-205ENST00000425819 PTPRMP28827 1452 aa22.48■■□□□ 1.19
SCRN1-205ENST00000425819 NLRP1Q9C000 1473 aa22.48■■□□□ 1.19
SCRN1-205ENST00000425819 A2ML1A8K2U0 1454 aa22.47■■□□□ 1.19
SCRN1-205ENST00000425819 STAC3Q96MF2 364 aa22.46■■□□□ 1.19
SCRN1-205ENST00000425819 NUTM2DQ5VT03 806 aaPredicted RBP22.46■■□□□ 1.19
SCRN1-205ENST00000425819 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.18
SCRN1-205ENST00000425819 ADGRF5Q8IZF2 1346 aa22.45■■□□□ 1.18
SCRN1-205ENST00000425819 MYOM2P54296 1465 aa22.45■■□□□ 1.18
SCRN1-205ENST00000425819 IFT172Q9UG01 1749 aa22.44■■□□□ 1.18
SCRN1-205ENST00000425819 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
SCRN1-205ENST00000425819 PPLO60437 1756 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms