RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 RTL5Q5HYW3 569 aaPredicted RBP17.25■□□□□ 0.35
TOP2B-203ENST00000424225 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
TOP2B-203ENST00000424225 PARD3Q8TEW0 1356 aa17.24■□□□□ 0.35
TOP2B-203ENST00000424225 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
TOP2B-203ENST00000424225 BRD4O60885 1362 aaPredicted RBP17.23■□□□□ 0.35
TOP2B-203ENST00000424225 MYBBP1AQ9BQG0 1328 aaKnown RBP17.23■□□□□ 0.35
TOP2B-203ENST00000424225 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
TOP2B-203ENST00000424225 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
TOP2B-203ENST00000424225 NFKBIBQ15653 356 aa17.22■□□□□ 0.35
TOP2B-203ENST00000424225 NUP160Q12769 1436 aa17.22■□□□□ 0.35
TOP2B-203ENST00000424225 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
TOP2B-203ENST00000424225 GPATCH8Q9UKJ3 1502 aaKnown RBP17.21■□□□□ 0.35
TOP2B-203ENST00000424225 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.34
TOP2B-203ENST00000424225 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
TOP2B-203ENST00000424225 NBPF1Q3BBV0 1214 aa17.2■□□□□ 0.34
TOP2B-203ENST00000424225 KDM5DQ9BY66 1539 aa17.19■□□□□ 0.34
TOP2B-203ENST00000424225 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
TOP2B-203ENST00000424225 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
TOP2B-203ENST00000424225 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
TOP2B-203ENST00000424225 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
TOP2B-203ENST00000424225 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
TOP2B-203ENST00000424225 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
TOP2B-203ENST00000424225 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
TOP2B-203ENST00000424225 RAPGEF6Q8TEU7 1601 aa17.16■□□□□ 0.34
TOP2B-203ENST00000424225 MS4A1P11836 297 aa17.16■□□□□ 0.34
TOP2B-203ENST00000424225 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
TOP2B-203ENST00000424225 PLEKHH1Q9ULM0 1364 aa17.15■□□□□ 0.34
TOP2B-203ENST00000424225 GSE1Q14687 1217 aa17.14■□□□□ 0.34
TOP2B-203ENST00000424225 FRAT2O75474 233 aaPredicted RBP17.14■□□□□ 0.33
TOP2B-203ENST00000424225 USP35Q9P2H5 1018 aa17.14■□□□□ 0.33
TOP2B-203ENST00000424225 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
TOP2B-203ENST00000424225 USP19O94966 1318 aa17.13■□□□□ 0.33
TOP2B-203ENST00000424225 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
TOP2B-203ENST00000424225 CC2D1BQ5T0F9 858 aaKnown RBP17.12■□□□□ 0.33
TOP2B-203ENST00000424225 TESK2Q96S53 571 aa17.12■□□□□ 0.33
TOP2B-203ENST00000424225 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
TOP2B-203ENST00000424225 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
TOP2B-203ENST00000424225 PLA2R1Q13018 1463 aa17.11■□□□□ 0.33
TOP2B-203ENST00000424225 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
TOP2B-203ENST00000424225 ANKRD50Q9ULJ7 1429 aa17.1■□□□□ 0.33
TOP2B-203ENST00000424225 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
TOP2B-203ENST00000424225 RALBP1Q15311 655 aa17.1■□□□□ 0.33
TOP2B-203ENST00000424225 SEC24BO95487 1268 aa17.09■□□□□ 0.33
TOP2B-203ENST00000424225 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
TOP2B-203ENST00000424225 ADCY10Q96PN6 1610 aa17.09■□□□□ 0.33
TOP2B-203ENST00000424225 RIMBP3CA6NJZ7 1639 aa17.08■□□□□ 0.32
TOP2B-203ENST00000424225 RIMBP3BA6NNM3 1639 aa17.08■□□□□ 0.32
TOP2B-203ENST00000424225 RIMBP3Q9UFD9 1639 aa17.08■□□□□ 0.32
TOP2B-203ENST00000424225 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
TOP2B-203ENST00000424225 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
TOP2B-203ENST00000424225 NUP155O75694 1391 aa17.08■□□□□ 0.32
TOP2B-203ENST00000424225 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
TOP2B-203ENST00000424225 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
TOP2B-203ENST00000424225 PTPRGP23470 1445 aa17.06■□□□□ 0.32
TOP2B-203ENST00000424225 DUSP27Q5VZP5 1158 aa17.06■□□□□ 0.32
TOP2B-203ENST00000424225 CFDP1Q9UEE9 299 aaPredicted RBP17.06■□□□□ 0.32
TOP2B-203ENST00000424225 MAGI2Q86UL8 1455 aa17.06■□□□□ 0.32
TOP2B-203ENST00000424225 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
TOP2B-203ENST00000424225 TROQ12816 1431 aaPredicted RBP17.05■□□□□ 0.32
TOP2B-203ENST00000424225 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
TOP2B-203ENST00000424225 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
TOP2B-203ENST00000424225 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
TOP2B-203ENST00000424225 ITSN2Q9NZM3 1697 aa17.03■□□□□ 0.32
TOP2B-203ENST00000424225 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
TOP2B-203ENST00000424225 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
TOP2B-203ENST00000424225 PANK3Q9H999 370 aa17.03■□□□□ 0.32
TOP2B-203ENST00000424225 A2MP01023 1474 aa17.02■□□□□ 0.32
TOP2B-203ENST00000424225 IGHDP01880 384 aa17.02■□□□□ 0.31
TOP2B-203ENST00000424225 PRDM15P57071 1507 aaPredicted RBP17.02■□□□□ 0.31
TOP2B-203ENST00000424225 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
TOP2B-203ENST00000424225 KTN1Q86UP2 1357 aaKnown RBP17.01■□□□□ 0.31
TOP2B-203ENST00000424225 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
TOP2B-203ENST00000424225 UBE2Q2Q8WVN8 375 aa17■□□□□ 0.31
TOP2B-203ENST00000424225 POGKQ9P215 609 aa17■□□□□ 0.31
TOP2B-203ENST00000424225 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
TOP2B-203ENST00000424225 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
TOP2B-203ENST00000424225 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
TOP2B-203ENST00000424225 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
TOP2B-203ENST00000424225 RGL3Q3MIN7 710 aa16.97■□□□□ 0.31
TOP2B-203ENST00000424225 BCAR3O75815 825 aa16.97■□□□□ 0.31
TOP2B-203ENST00000424225 ANKRD30AQ9BXX3 1397 aa16.96■□□□□ 0.31
TOP2B-203ENST00000424225 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.313e-7■■■■■ 33.3
TOP2B-203ENST00000424225 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
TOP2B-203ENST00000424225 GPRASP1Q5JY77 1395 aa16.96■□□□□ 0.31
TOP2B-203ENST00000424225 RGS3P49796 1198 aa16.96■□□□□ 0.31
TOP2B-203ENST00000424225 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
TOP2B-203ENST00000424225 MYOM1P52179 1685 aa16.94■□□□□ 0.3
TOP2B-203ENST00000424225 TRMT2AQ8IZ69 625 aaKnown RBP16.93■□□□□ 0.3
TOP2B-203ENST00000424225 ABCA8O94911 1581 aa16.92■□□□□ 0.3
TOP2B-203ENST00000424225 CDC42BPBQ9Y5S2 1711 aa16.92■□□□□ 0.3
TOP2B-203ENST00000424225 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
TOP2B-203ENST00000424225 SAMD9LQ8IVG5 1584 aa16.91■□□□□ 0.3
TOP2B-203ENST00000424225 TNNQ9UQP3 1299 aa16.91■□□□□ 0.3
TOP2B-203ENST00000424225 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
TOP2B-203ENST00000424225 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
TOP2B-203ENST00000424225 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
TOP2B-203ENST00000424225 ANTXR1Q9H6X2 564 aa16.9■□□□□ 0.3
TOP2B-203ENST00000424225 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
TOP2B-203ENST00000424225 LAMC1P11047 1609 aa16.9■□□□□ 0.3
TOP2B-203ENST00000424225 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms