RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
TOP2B-203ENST00000424225 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
TOP2B-203ENST00000424225 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
TOP2B-203ENST00000424225 MYO15BQ96JP2 1530 aa22.33■■□□□ 1.16
TOP2B-203ENST00000424225 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
TOP2B-203ENST00000424225 HRCP23327 699 aa22.11■■□□□ 1.13
TOP2B-203ENST00000424225 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
TOP2B-203ENST00000424225 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
TOP2B-203ENST00000424225 PCGF6Q9BYE7 350 aa21.79■■□□□ 1.08
TOP2B-203ENST00000424225 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
TOP2B-203ENST00000424225 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
TOP2B-203ENST00000424225 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
TOP2B-203ENST00000424225 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
TOP2B-203ENST00000424225 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
TOP2B-203ENST00000424225 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
TOP2B-203ENST00000424225 NACADO15069 1562 aa20.85■□□□□ 0.93
TOP2B-203ENST00000424225 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
TOP2B-203ENST00000424225 ABCC9O60706 1549 aa20.68■□□□□ 0.9
TOP2B-203ENST00000424225 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
TOP2B-203ENST00000424225 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
TOP2B-203ENST00000424225 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
TOP2B-203ENST00000424225 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
TOP2B-203ENST00000424225 ZEB1P37275 1124 aaPredicted RBP20.39■□□□□ 0.86
TOP2B-203ENST00000424225 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.85
TOP2B-203ENST00000424225 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
TOP2B-203ENST00000424225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
TOP2B-203ENST00000424225 SCRIBQ14160 1630 aa20.33■□□□□ 0.84
TOP2B-203ENST00000424225 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
TOP2B-203ENST00000424225 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
TOP2B-203ENST00000424225 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
TOP2B-203ENST00000424225 GTF3C3Q9Y5Q9 886 aa20.16■□□□□ 0.82
TOP2B-203ENST00000424225 MROH2BQ7Z745 1585 aa20.07■□□□□ 0.8
TOP2B-203ENST00000424225 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
TOP2B-203ENST00000424225 WIZO95785 1651 aa20.05■□□□□ 0.8
TOP2B-203ENST00000424225 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
TOP2B-203ENST00000424225 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
TOP2B-203ENST00000424225 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
TOP2B-203ENST00000424225 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
TOP2B-203ENST00000424225 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
TOP2B-203ENST00000424225 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.76
TOP2B-203ENST00000424225 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.75
TOP2B-203ENST00000424225 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
TOP2B-203ENST00000424225 SOGA1O94964 1423 aa19.74■□□□□ 0.75
TOP2B-203ENST00000424225 MIER1Q8N108 512 aa19.73■□□□□ 0.75
TOP2B-203ENST00000424225 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
TOP2B-203ENST00000424225 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
TOP2B-203ENST00000424225 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
TOP2B-203ENST00000424225 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
TOP2B-203ENST00000424225 CENPBP07199 599 aaPredicted RBP19.63■□□□□ 0.73
TOP2B-203ENST00000424225 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
TOP2B-203ENST00000424225 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
TOP2B-203ENST00000424225 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
TOP2B-203ENST00000424225 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
TOP2B-203ENST00000424225 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
TOP2B-203ENST00000424225 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
TOP2B-203ENST00000424225 SMARCA4P51532 1647 aa19.34■□□□□ 0.69
TOP2B-203ENST00000424225 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
TOP2B-203ENST00000424225 MYT1Q01538 1121 aa19.29■□□□□ 0.68
TOP2B-203ENST00000424225 SUPT16HQ9Y5B9 1047 aaKnown RBP19.28■□□□□ 0.68
TOP2B-203ENST00000424225 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
TOP2B-203ENST00000424225 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
TOP2B-203ENST00000424225 CLIP1P30622 1438 aa19.24■□□□□ 0.67
TOP2B-203ENST00000424225 GOLGA3Q08378 1498 aa19.23■□□□□ 0.67
TOP2B-203ENST00000424225 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
TOP2B-203ENST00000424225 TSHZ2Q9NRE2 1034 aa19.19■□□□□ 0.66
TOP2B-203ENST00000424225 HMGXB3Q12766 1538 aa19.18■□□□□ 0.66
TOP2B-203ENST00000424225 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
TOP2B-203ENST00000424225 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
TOP2B-203ENST00000424225 KIF21BO75037 1637 aa19.13■□□□□ 0.65
TOP2B-203ENST00000424225 EEA1Q15075 1411 aa19.11■□□□□ 0.65
TOP2B-203ENST00000424225 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
TOP2B-203ENST00000424225 RANGAP1P46060 587 aaPredicted RBP19.07■□□□□ 0.64
TOP2B-203ENST00000424225 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
TOP2B-203ENST00000424225 KANK4Q5T7N3 995 aaPredicted RBP19.05■□□□□ 0.64
TOP2B-203ENST00000424225 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
TOP2B-203ENST00000424225 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
TOP2B-203ENST00000424225 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
TOP2B-203ENST00000424225 ANP32EQ9BTT0 268 aa18.9■□□□□ 0.62
TOP2B-203ENST00000424225 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
TOP2B-203ENST00000424225 MAPKBP1O60336 1514 aa18.89■□□□□ 0.61
TOP2B-203ENST00000424225 BCANQ96GW7 911 aa18.87■□□□□ 0.61
TOP2B-203ENST00000424225 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
TOP2B-203ENST00000424225 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
TOP2B-203ENST00000424225 CUX2O14529 1486 aa18.81■□□□□ 0.6
TOP2B-203ENST00000424225 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
TOP2B-203ENST00000424225 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
TOP2B-203ENST00000424225 WDR97A6NE52 1622 aa18.77■□□□□ 0.59
TOP2B-203ENST00000424225 PRXQ9BXM0 1461 aa18.77■□□□□ 0.59
TOP2B-203ENST00000424225 CLSPNQ9HAW4 1339 aa18.76■□□□□ 0.59
TOP2B-203ENST00000424225 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
TOP2B-203ENST00000424225 MSH5O43196 834 aa18.75■□□□□ 0.59
TOP2B-203ENST00000424225 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
TOP2B-203ENST00000424225 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
TOP2B-203ENST00000424225 FKBP8Q14318 412 aa18.69■□□□□ 0.58
TOP2B-203ENST00000424225 BIVM-ERCC5R4GMW8 1640 aa18.69■□□□□ 0.58
TOP2B-203ENST00000424225 ITGAEP38570 1179 aa18.68■□□□□ 0.58
TOP2B-203ENST00000424225 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
TOP2B-203ENST00000424225 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
TOP2B-203ENST00000424225 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
TOP2B-203ENST00000424225 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms