RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
RAF1-203ENST00000423275 ZCCHC11Q5TAX3 1644 aaKnown RBP25.65■■□□□ 1.7
RAF1-203ENST00000423275 PLEKHH2Q8IVE3 1493 aa25.65■■□□□ 1.7
RAF1-203ENST00000423275 UNC13BO14795 1591 aa25.64■■□□□ 1.69
RAF1-203ENST00000423275 PLA2R1Q13018 1463 aa25.63■■□□□ 1.69
RAF1-203ENST00000423275 ST20-MTHFSA0A0A6YYL1 179 aa25.62■■□□□ 1.69
RAF1-203ENST00000423275 PLCH2O75038 1416 aa25.62■■□□□ 1.69
RAF1-203ENST00000423275 PLXNC1O60486 1568 aa25.61■■□□□ 1.69
RAF1-203ENST00000423275 CCDC144AA2RUR9 1427 aa25.61■■□□□ 1.69
RAF1-203ENST00000423275 ARID4BQ4LE39 1312 aaPredicted RBP25.6■■□□□ 1.69
RAF1-203ENST00000423275 ZBED9Q6R2W3 1325 aa25.6■■□□□ 1.69
RAF1-203ENST00000423275 RGL3Q3MIN7 710 aa25.6■■□□□ 1.69
RAF1-203ENST00000423275 OSCARQ8IYS5 282 aa25.6■■□□□ 1.69
RAF1-203ENST00000423275 UHRF1BP1LA0JNW5 1464 aa25.58■■□□□ 1.69
RAF1-203ENST00000423275 EFCAB2Q5VUJ9 269 aa25.56■■□□□ 1.68
RAF1-203ENST00000423275 ROCK2O75116 1388 aaKnown RBP25.56■■□□□ 1.68
RAF1-203ENST00000423275 TRAPPC8Q9Y2L5 1435 aa25.55■■□□□ 1.68
RAF1-203ENST00000423275 RBM19Q9Y4C8 960 aaKnown RBP25.55■■□□□ 1.68
RAF1-203ENST00000423275 DUOX2Q9NRD8 1548 aa25.55■■□□□ 1.68
RAF1-203ENST00000423275 IQGAP3Q86VI3 1631 aa25.55■■□□□ 1.68
RAF1-203ENST00000423275 PRAG1Q86YV5 1406 aa25.54■■□□□ 1.68
RAF1-203ENST00000423275 NBPF1Q3BBV0 1214 aa25.52■■□□□ 1.68
RAF1-203ENST00000423275 ABCC1P33527 1531 aa25.52■■□□□ 1.68
RAF1-203ENST00000423275 A2MP01023 1474 aa25.51■■□□□ 1.67
RAF1-203ENST00000423275 TRPM1Q7Z4N2 1603 aa25.5■■□□□ 1.67
RAF1-203ENST00000423275 ERBINQ96RT1 1412 aa25.5■■□□□ 1.67
RAF1-203ENST00000423275 MAGI2Q86UL8 1455 aa25.49■■□□□ 1.67
RAF1-203ENST00000423275 AFAP1Q8N556 730 aa25.46■■□□□ 1.67
RAF1-203ENST00000423275 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
RAF1-203ENST00000423275 ATP10AO60312 1499 aa25.42■■□□□ 1.66
RAF1-203ENST00000423275 SPAG9O60271 1321 aaKnown RBP25.42■■□□□ 1.66
RAF1-203ENST00000423275 PPP4R2Q9NY27 417 aa25.41■■□□□ 1.66
RAF1-203ENST00000423275 GPRASP1Q5JY77 1395 aa25.4■■□□□ 1.66
RAF1-203ENST00000423275 E9PCH4 1651 aa25.39■■□□□ 1.65
RAF1-203ENST00000423275 SENP3-EIF4A1A0A087X0R7 540 aa25.39■■□□□ 1.65
RAF1-203ENST00000423275 PNISRQ8TF01 805 aaKnown RBP25.38■■□□□ 1.65
RAF1-203ENST00000423275 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
RAF1-203ENST00000423275 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
RAF1-203ENST00000423275 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
RAF1-203ENST00000423275 ANP32EQ9BTT0 268 aa25.37■■□□□ 1.65
RAF1-203ENST00000423275 TMC1Q8TDI8 760 aa25.36■■□□□ 1.65
RAF1-203ENST00000423275 ZFYVE16Q7Z3T8 1539 aa25.36■■□□□ 1.65
RAF1-203ENST00000423275 WDR7Q9Y4E6 1490 aa25.35■■□□□ 1.65
RAF1-203ENST00000423275 SMG6Q86US8 1419 aaKnown RBP25.35■■□□□ 1.65
RAF1-203ENST00000423275 ARAP3Q8WWN8 1544 aa25.34■■□□□ 1.65
RAF1-203ENST00000423275 TESK2Q96S53 571 aa25.34■■□□□ 1.65
RAF1-203ENST00000423275 RTEL1-TNFRSF6BF6WH68 1400 aa25.34■■□□□ 1.65
RAF1-203ENST00000423275 PRDM15P57071 1507 aaPredicted RBP25.34■■□□□ 1.65
RAF1-203ENST00000423275 B4GALNT3Q6L9W6 998 aa25.32■■□□□ 1.64
RAF1-203ENST00000423275 DISP3Q9P2K9 1392 aa25.31■■□□□ 1.64
RAF1-203ENST00000423275 LAMC1P11047 1609 aa25.31■■□□□ 1.64
RAF1-203ENST00000423275 FANCAO15360 1455 aa25.3■■□□□ 1.64
RAF1-203ENST00000423275 MYBBP1AQ9BQG0 1328 aaKnown RBP25.3■■□□□ 1.64
RAF1-203ENST00000423275 RALBP1Q15311 655 aa25.29■■□□□ 1.64
RAF1-203ENST00000423275 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
RAF1-203ENST00000423275 COL17A1Q9UMD9 1497 aaPredicted RBP25.29■■□□□ 1.64
RAF1-203ENST00000423275 EIF2AK4Q9P2K8 1649 aaKnown RBP25.29■■□□□ 1.64
RAF1-203ENST00000423275 PER1O15534 1290 aaPredicted RBP25.28■■□□□ 1.64
RAF1-203ENST00000423275 ABCA9Q8IUA7 1624 aa25.27■■□□□ 1.64
RAF1-203ENST00000423275 BRD4O60885 1362 aaPredicted RBP25.26■■□□□ 1.63
RAF1-203ENST00000423275 KTN1Q86UP2 1357 aaKnown RBP25.26■■□□□ 1.63
RAF1-203ENST00000423275 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
RAF1-203ENST00000423275 ATP7AQ04656 1500 aa25.24■■□□□ 1.63
RAF1-203ENST00000423275 DEPDC5O75140 1603 aa25.23■■□□□ 1.63
RAF1-203ENST00000423275 PARD3Q8TEW0 1356 aa25.23■■□□□ 1.63
RAF1-203ENST00000423275 INO80Q9ULG1 1556 aaPredicted RBP25.23■■□□□ 1.63
RAF1-203ENST00000423275 SCAPERQ9BY12 1400 aa25.23■■□□□ 1.63
RAF1-203ENST00000423275 TRPM2O94759 1503 aa25.22■■□□□ 1.63
RAF1-203ENST00000423275 MYT1LQ9UL68 1186 aa25.22■■□□□ 1.63
RAF1-203ENST00000423275 RNF17Q9BXT8 1623 aaKnown RBP25.21■■□□□ 1.63
RAF1-203ENST00000423275 PTPRTO14522 1441 aa25.21■■□□□ 1.63
RAF1-203ENST00000423275 ASXL2Q76L83 1435 aa25.21■■□□□ 1.63
RAF1-203ENST00000423275 ADGRL1O94910 1474 aa25.21■■□□□ 1.63
RAF1-203ENST00000423275 KIF3BO15066 747 aa25.21■■□□□ 1.63
RAF1-203ENST00000423275 CLTCL1P53675 1640 aa25.2■■□□□ 1.62
RAF1-203ENST00000423275 MADDQ8WXG6 1647 aa25.2■■□□□ 1.62
RAF1-203ENST00000423275 SPHKAPQ2M3C7 1700 aa25.2■■□□□ 1.62
RAF1-203ENST00000423275 PANK3Q9H999 370 aa25.19■■□□□ 1.62
RAF1-203ENST00000423275 RNF123Q5XPI4 1314 aa25.19■■□□□ 1.62
RAF1-203ENST00000423275 TMF1P82094 1093 aa25.18■■□□□ 1.62
RAF1-203ENST00000423275 MSH5O43196 834 aa25.17■■□□□ 1.62
RAF1-203ENST00000423275 CC2D1BQ5T0F9 858 aaKnown RBP25.17■■□□□ 1.62
RAF1-203ENST00000423275 NLRP13Q86W25 1043 aa25.17■■□□□ 1.62
RAF1-203ENST00000423275 TET3O43151 1660 aa25.16■■□□□ 1.62
RAF1-203ENST00000423275 CEP152O94986 1710 aa25.16■■□□□ 1.62
RAF1-203ENST00000423275 VWDEQ8N2E2 1590 aa25.16■■□□□ 1.62
RAF1-203ENST00000423275 KANK1Q14678 1352 aa25.13■■□□□ 1.61
RAF1-203ENST00000423275 FANCIQ9NVI1 1328 aa25.13■■□□□ 1.61
RAF1-203ENST00000423275 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
RAF1-203ENST00000423275 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
RAF1-203ENST00000423275 WASHC2CQ9Y4E1 1318 aa25.09■■□□□ 1.61
RAF1-203ENST00000423275 UGGT1Q9NYU2 1555 aa25.09■■□□□ 1.61
RAF1-203ENST00000423275 SALL2Q9Y467 1007 aaPredicted RBP25.09■■□□□ 1.61
RAF1-203ENST00000423275 KIDINS220Q9ULH0 1771 aa25.07■■□□□ 1.6
RAF1-203ENST00000423275 SCAF11Q99590 1463 aaKnown RBP25.04■■□□□ 1.6
RAF1-203ENST00000423275 CCDC136Q96JN2 1154 aa25.03■■□□□ 1.6
RAF1-203ENST00000423275 STAC3Q96MF2 364 aa25.03■■□□□ 1.6
RAF1-203ENST00000423275 NPM1P06748 294 aaKnown RBP eCLIP25.01■■□□□ 1.59
RAF1-203ENST00000423275 ADGRF5Q8IZF2 1346 aa25■■□□□ 1.59
RAF1-203ENST00000423275 CFAP70Q5T0N1 1121 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms