RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
CTCFL-203ENST00000422109 PRKCSHP14314 528 aaPredicted RBP18.54■□□□□ 0.56
CTCFL-203ENST00000422109 SAMD9LQ8IVG5 1584 aa18.53■□□□□ 0.56
CTCFL-203ENST00000422109 SHANK2Q9UPX8 1470 aa18.53■□□□□ 0.56
CTCFL-203ENST00000422109 ERICH6BQ5W0A0 696 aa18.53■□□□□ 0.56
CTCFL-203ENST00000422109 UHRF1BP1Q6BDS2 1440 aa18.52■□□□□ 0.56
CTCFL-203ENST00000422109 FAM135AQ9P2D6 1515 aa18.52■□□□□ 0.56
CTCFL-203ENST00000422109 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
CTCFL-203ENST00000422109 SMG6Q86US8 1419 aaKnown RBP18.51■□□□□ 0.55
CTCFL-203ENST00000422109 PLEKHH2Q8IVE3 1493 aa18.5■□□□□ 0.55
CTCFL-203ENST00000422109 ARID4BQ4LE39 1312 aaPredicted RBP18.5■□□□□ 0.55
CTCFL-203ENST00000422109 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
CTCFL-203ENST00000422109 ERCC6L2Q5T890 1561 aa18.48■□□□□ 0.55
CTCFL-203ENST00000422109 PANK3Q9H999 370 aa18.48■□□□□ 0.55
CTCFL-203ENST00000422109 RALBP1Q15311 655 aa18.47■□□□□ 0.55
CTCFL-203ENST00000422109 RSPH4AQ5TD94 716 aa18.46■□□□□ 0.55
CTCFL-203ENST00000422109 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
CTCFL-203ENST00000422109 TTC37Q6PGP7 1564 aa18.46■□□□□ 0.55
CTCFL-203ENST00000422109 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
CTCFL-203ENST00000422109 DISP3Q9P2K9 1392 aa18.45■□□□□ 0.54
CTCFL-203ENST00000422109 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
CTCFL-203ENST00000422109 PRAG1Q86YV5 1406 aa18.45■□□□□ 0.54
CTCFL-203ENST00000422109 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
CTCFL-203ENST00000422109 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
CTCFL-203ENST00000422109 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
CTCFL-203ENST00000422109 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
CTCFL-203ENST00000422109 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
CTCFL-203ENST00000422109 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
CTCFL-203ENST00000422109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.42■□□□□ 0.54
CTCFL-203ENST00000422109 CHD1O14646 1710 aa18.42■□□□□ 0.54
CTCFL-203ENST00000422109 PLIN1O60240 522 aa18.42■□□□□ 0.54
CTCFL-203ENST00000422109 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
CTCFL-203ENST00000422109 A2MP01023 1474 aa18.42■□□□□ 0.54
CTCFL-203ENST00000422109 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
CTCFL-203ENST00000422109 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
CTCFL-203ENST00000422109 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
CTCFL-203ENST00000422109 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.54
CTCFL-203ENST00000422109 TESK2Q96S53 571 aa18.39■□□□□ 0.54
CTCFL-203ENST00000422109 TMF1P82094 1093 aa18.39■□□□□ 0.53
CTCFL-203ENST00000422109 RCAN3Q9UKA8 241 aa18.39■□□□□ 0.53
CTCFL-203ENST00000422109 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
CTCFL-203ENST00000422109 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
CTCFL-203ENST00000422109 LRPPRCP42704 1394 aaKnown RBP18.36■□□□□ 0.53
CTCFL-203ENST00000422109 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
CTCFL-203ENST00000422109 SPAG9O60271 1321 aaKnown RBP18.35■□□□□ 0.53
CTCFL-203ENST00000422109 NBR1Q14596 966 aa18.35■□□□□ 0.53
CTCFL-203ENST00000422109 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
CTCFL-203ENST00000422109 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
CTCFL-203ENST00000422109 RNF123Q5XPI4 1314 aa18.34■□□□□ 0.53
CTCFL-203ENST00000422109 TRPM1Q7Z4N2 1603 aa18.33■□□□□ 0.53
CTCFL-203ENST00000422109 PARD3Q8TEW0 1356 aa18.33■□□□□ 0.52
CTCFL-203ENST00000422109 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
CTCFL-203ENST00000422109 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
CTCFL-203ENST00000422109 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
CTCFL-203ENST00000422109 KIF3BO15066 747 aa18.3■□□□□ 0.52
CTCFL-203ENST00000422109 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
CTCFL-203ENST00000422109 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
CTCFL-203ENST00000422109 CHGAP10645 457 aaKnown RBP18.29■□□□□ 0.52
CTCFL-203ENST00000422109 MYO5CQ9NQX4 1742 aa18.28■□□□□ 0.52
CTCFL-203ENST00000422109 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
CTCFL-203ENST00000422109 PLCH2O75038 1416 aa18.27■□□□□ 0.52
CTCFL-203ENST00000422109 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
CTCFL-203ENST00000422109 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
CTCFL-203ENST00000422109 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
CTCFL-203ENST00000422109 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
CTCFL-203ENST00000422109 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
CTCFL-203ENST00000422109 ANP32AP39687 249 aaKnown RBP18.25■□□□□ 0.51
CTCFL-203ENST00000422109 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
CTCFL-203ENST00000422109 UNC13BO14795 1591 aa18.25■□□□□ 0.51
CTCFL-203ENST00000422109 E9PCH4 1651 aa18.25■□□□□ 0.51
CTCFL-203ENST00000422109 CRBNQ96SW2 442 aa18.24■□□□□ 0.51
CTCFL-203ENST00000422109 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
CTCFL-203ENST00000422109 PPP2R1AP30153 589 aa18.22■□□□□ 0.51
CTCFL-203ENST00000422109 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
CTCFL-203ENST00000422109 IQGAP3Q86VI3 1631 aa18.22■□□□□ 0.51
CTCFL-203ENST00000422109 PRDM15P57071 1507 aaPredicted RBP18.21■□□□□ 0.51
CTCFL-203ENST00000422109 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
CTCFL-203ENST00000422109 ZCCHC11Q5TAX3 1644 aaKnown RBP18.2■□□□□ 0.5
CTCFL-203ENST00000422109 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
CTCFL-203ENST00000422109 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
CTCFL-203ENST00000422109 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
CTCFL-203ENST00000422109 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
CTCFL-203ENST00000422109 PLXNC1O60486 1568 aa18.18■□□□□ 0.5
CTCFL-203ENST00000422109 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
CTCFL-203ENST00000422109 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
CTCFL-203ENST00000422109 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
CTCFL-203ENST00000422109 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
CTCFL-203ENST00000422109 ADGRF5Q8IZF2 1346 aa18.16■□□□□ 0.5
CTCFL-203ENST00000422109 ABCC1P33527 1531 aa18.15■□□□□ 0.5
CTCFL-203ENST00000422109 IPO9Q96P70 1041 aaKnown RBP18.15■□□□□ 0.5
CTCFL-203ENST00000422109 WASHC2CQ9Y4E1 1318 aa18.15■□□□□ 0.5
CTCFL-203ENST00000422109 ATP10AO60312 1499 aa18.15■□□□□ 0.5
CTCFL-203ENST00000422109 KANK1Q14678 1352 aa18.14■□□□□ 0.49
CTCFL-203ENST00000422109 GGT6Q6P531 493 aa18.14■□□□□ 0.49
CTCFL-203ENST00000422109 PLEKHH1Q9ULM0 1364 aa18.13■□□□□ 0.49
CTCFL-203ENST00000422109 PDE4AP27815 886 aa18.13■□□□□ 0.49
CTCFL-203ENST00000422109 EIF2AK4Q9P2K8 1649 aaKnown RBP18.13■□□□□ 0.49
CTCFL-203ENST00000422109 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
CTCFL-203ENST00000422109 WDR7Q9Y4E6 1490 aa18.12■□□□□ 0.49
CTCFL-203ENST00000422109 APAF1O14727 1248 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms