RNA–Protein interactions for RNA: ENST00000421431.1

UBL4A-204, Transcript of ubiquitin like 4A, humanhuman

TSL 5

Gene UBL4A, Length 1,652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-204ENST00000421431 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
UBL4A-204ENST00000421431 YEATS2Q9ULM3 1422 aa23.39■■□□□ 1.34
UBL4A-204ENST00000421431 BCORL1Q5H9F3 1711 aa23.39■■□□□ 1.34
UBL4A-204ENST00000421431 NUP155O75694 1391 aa23.39■■□□□ 1.34
UBL4A-204ENST00000421431 A2MP01023 1474 aa23.39■■□□□ 1.34
UBL4A-204ENST00000421431 ARHGEF40Q8TER5 1519 aa23.38■■□□□ 1.33
UBL4A-204ENST00000421431 SIGLEC1Q9BZZ2 1709 aa23.38■■□□□ 1.33
UBL4A-204ENST00000421431 MADDQ8WXG6 1647 aa23.37■■□□□ 1.33
UBL4A-204ENST00000421431 EIF2AK4Q9P2K8 1649 aaKnown RBP23.36■■□□□ 1.33
UBL4A-204ENST00000421431 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
UBL4A-204ENST00000421431 PTPRMP28827 1452 aa23.35■■□□□ 1.33
UBL4A-204ENST00000421431 ILDR1Q86SU0 546 aaPredicted RBP23.35■■□□□ 1.33
UBL4A-204ENST00000421431 FAM135AQ9P2D6 1515 aa23.34■■□□□ 1.33
UBL4A-204ENST00000421431 DEPDC5O75140 1603 aa23.34■■□□□ 1.33
UBL4A-204ENST00000421431 FOXD1Q16676 465 aa23.32■■□□□ 1.32
UBL4A-204ENST00000421431 IQGAP3Q86VI3 1631 aa23.32■■□□□ 1.32
UBL4A-204ENST00000421431 MROH1Q8NDA8 1641 aa23.31■■□□□ 1.32
UBL4A-204ENST00000421431 SIN3AQ96ST3 1273 aa23.31■■□□□ 1.32
UBL4A-204ENST00000421431 ARID4BQ4LE39 1312 aaPredicted RBP23.31■■□□□ 1.32
UBL4A-204ENST00000421431 KIF3BO15066 747 aa23.3■■□□□ 1.32
UBL4A-204ENST00000421431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.32
UBL4A-204ENST00000421431 RIMS1Q86UR5 1692 aaKnown RBP23.29■■□□□ 1.32
UBL4A-204ENST00000421431 PRDM15P57071 1507 aaPredicted RBP23.28■■□□□ 1.32
UBL4A-204ENST00000421431 PKD2Q13563 968 aa23.28■■□□□ 1.32
UBL4A-204ENST00000421431 VWDEQ8N2E2 1590 aa23.27■■□□□ 1.32
UBL4A-204ENST00000421431 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
UBL4A-204ENST00000421431 RNF17Q9BXT8 1623 aaKnown RBP23.27■■□□□ 1.32
UBL4A-204ENST00000421431 ATP10AO60312 1499 aa23.25■■□□□ 1.31
UBL4A-204ENST00000421431 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
UBL4A-204ENST00000421431 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
UBL4A-204ENST00000421431 KANK1Q14678 1352 aa23.19■■□□□ 1.3
UBL4A-204ENST00000421431 AGLP35573 1532 aa23.17■■□□□ 1.3
UBL4A-204ENST00000421431 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
UBL4A-204ENST00000421431 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
UBL4A-204ENST00000421431 GGT6Q6P531 493 aa23.16■■□□□ 1.3
UBL4A-204ENST00000421431 PLPPR3Q6T4P5 718 aa23.16■■□□□ 1.3
UBL4A-204ENST00000421431 TET3O43151 1660 aa23.15■■□□□ 1.3
UBL4A-204ENST00000421431 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.3
UBL4A-204ENST00000421431 RPRD2Q5VT52 1461 aaKnown RBP23.14■■□□□ 1.3
UBL4A-204ENST00000421431 E9PCH4 1651 aa23.14■■□□□ 1.29
UBL4A-204ENST00000421431 PLA2R1Q13018 1463 aa23.13■■□□□ 1.29
UBL4A-204ENST00000421431 MLECQ14165 292 aa23.13■■□□□ 1.29
UBL4A-204ENST00000421431 TIMELESSQ9UNS1 1208 aa23.12■■□□□ 1.29
UBL4A-204ENST00000421431 ABCC3O15438 1527 aa23.11■■□□□ 1.29
UBL4A-204ENST00000421431 CEP152O94986 1710 aa23.11■■□□□ 1.29
UBL4A-204ENST00000421431 EFCAB6Q5THR3 1501 aa23.1■■□□□ 1.29
UBL4A-204ENST00000421431 TONSLQ96HA7 1378 aa23.09■■□□□ 1.29
UBL4A-204ENST00000421431 PTPRTO14522 1441 aa23.05■■□□□ 1.28
UBL4A-204ENST00000421431 WASHC2CQ9Y4E1 1318 aa23.05■■□□□ 1.28
UBL4A-204ENST00000421431 HSPA2P54652 639 aa23.05■■□□□ 1.28
UBL4A-204ENST00000421431 ZC3H13Q5T200 1668 aaKnown RBP23.04■■□□□ 1.28
UBL4A-204ENST00000421431 NPATQ14207 1427 aa23.03■■□□□ 1.28
UBL4A-204ENST00000421431 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
UBL4A-204ENST00000421431 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
UBL4A-204ENST00000421431 TRPM2O94759 1503 aa23.02■■□□□ 1.28
UBL4A-204ENST00000421431 SPHKAPQ2M3C7 1700 aa23.01■■□□□ 1.27
UBL4A-204ENST00000421431 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
UBL4A-204ENST00000421431 L3MBTL2Q969R5 705 aa22.99■■□□□ 1.27
UBL4A-204ENST00000421431 ARHGAP31Q2M1Z3 1444 aa22.99■■□□□ 1.27
UBL4A-204ENST00000421431 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
UBL4A-204ENST00000421431 CEBPAP49715 358 aaPredicted RBP22.96■■□□□ 1.27
UBL4A-204ENST00000421431 CLTCL1P53675 1640 aa22.95■■□□□ 1.26
UBL4A-204ENST00000421431 NOS1P29475 1434 aa22.92■■□□□ 1.26
UBL4A-204ENST00000421431 UGGT1Q9NYU2 1555 aa22.92■■□□□ 1.26
UBL4A-204ENST00000421431 PREX1Q8TCU6 1659 aa22.92■■□□□ 1.26
UBL4A-204ENST00000421431 CLTCQ00610 1675 aaKnown RBP22.92■■□□□ 1.26
UBL4A-204ENST00000421431 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
UBL4A-204ENST00000421431 SPATA31E1Q6ZUB1 1445 aa22.9■■□□□ 1.26
UBL4A-204ENST00000421431 FBXO41Q8TF61 875 aa22.88■■□□□ 1.25
UBL4A-204ENST00000421431 SYNMO15061 1565 aa22.88■■□□□ 1.25
UBL4A-204ENST00000421431 C3P01024 1663 aa22.88■■□□□ 1.25
UBL4A-204ENST00000421431 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
UBL4A-204ENST00000421431 NBPF8Q3BBV2 869 aa22.84■■□□□ 1.25
UBL4A-204ENST00000421431 NEURL4Q96JN8 1562 aa22.83■■□□□ 1.25
UBL4A-204ENST00000421431 RGL3Q3MIN7 710 aa22.83■■□□□ 1.24
UBL4A-204ENST00000421431 FBXO31Q5XUX0 539 aaPredicted RBP22.83■■□□□ 1.24
UBL4A-204ENST00000421431 STRCQ7RTU9 1775 aa22.83■■□□□ 1.24
UBL4A-204ENST00000421431 PIK3C2BO00750 1634 aa22.83■■□□□ 1.24
UBL4A-204ENST00000421431 ZMYM3Q14202 1370 aa22.81■■□□□ 1.24
UBL4A-204ENST00000421431 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
UBL4A-204ENST00000421431 UHRF1BP1Q6BDS2 1440 aa22.8■■□□□ 1.24
UBL4A-204ENST00000421431 SPATA31D1Q6ZQQ2 1576 aa22.8■■□□□ 1.24
UBL4A-204ENST00000421431 DCAF11Q8TEB1 546 aa22.8■■□□□ 1.24
UBL4A-204ENST00000421431 ESF1Q9H501 851 aaKnown RBP22.8■■□□□ 1.24
UBL4A-204ENST00000421431 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
UBL4A-204ENST00000421431 MROH2AA6NES4 1674 aa22.78■■□□□ 1.24
UBL4A-204ENST00000421431 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.24
UBL4A-204ENST00000421431 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
UBL4A-204ENST00000421431 KIF1BO60333 1816 aa22.75■■□□□ 1.23
UBL4A-204ENST00000421431 IDI1Q13907 227 aa22.74■■□□□ 1.23
UBL4A-204ENST00000421431 SLC52A1Q9NWF4 448 aa22.74■■□□□ 1.23
UBL4A-204ENST00000421431 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
UBL4A-204ENST00000421431 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
UBL4A-204ENST00000421431 ZNF316A6NFI3 1004 aaPredicted RBP22.71■■□□□ 1.23
UBL4A-204ENST00000421431 CHGAP10645 457 aaKnown RBP22.69■■□□□ 1.22
UBL4A-204ENST00000421431 RALGAPBQ86X10 1494 aa22.69■■□□□ 1.22
UBL4A-204ENST00000421431 CERKQ8TCT0 537 aa22.68■■□□□ 1.22
UBL4A-204ENST00000421431 IFT172Q9UG01 1749 aa22.67■■□□□ 1.22
UBL4A-204ENST00000421431 TMEM131LA2VDJ0 1609 aa22.67■■□□□ 1.22
UBL4A-204ENST00000421431 MYOM2P54296 1465 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms