RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 ZNF467Q7Z7K2 595 aaPredicted RBP7.58□□□□□ -1.2
CNGA1-203ENST00000420489 REREQ9P2R6 1566 aa7.58□□□□□ -1.2
CNGA1-203ENST00000420489 FHOD3Q2V2M9 1422 aa7.58□□□□□ -1.2
CNGA1-203ENST00000420489 PKD2Q13563 968 aa7.58□□□□□ -1.2
CNGA1-203ENST00000420489 RAPGEF6Q8TEU7 1601 aa7.57□□□□□ -1.2
CNGA1-203ENST00000420489 RNF17Q9BXT8 1623 aaKnown RBP7.57□□□□□ -1.2
CNGA1-203ENST00000420489 NPATQ14207 1427 aa7.56□□□□□ -1.2
CNGA1-203ENST00000420489 CARMIL2Q6F5E8 1435 aa7.56□□□□□ -1.2
CNGA1-203ENST00000420489 ABCA9Q8IUA7 1624 aa7.56□□□□□ -1.2
CNGA1-203ENST00000420489 IER5LQ5T953 404 aa7.56□□□□□ -1.2
CNGA1-203ENST00000420489 ALKQ9UM73 1620 aa7.56□□□□□ -1.2
CNGA1-203ENST00000420489 SETD1AO15047 1707 aaKnown RBP7.56□□□□□ -1.2
CNGA1-203ENST00000420489 MAMSTRQ6ZN01 415 aa7.56□□□□□ -1.2
CNGA1-203ENST00000420489 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
CNGA1-203ENST00000420489 BMP2KQ9NSY1 1161 aaPredicted RBP7.55□□□□□ -1.2
CNGA1-203ENST00000420489 TCOF1Q13428 1488 aaKnown RBP7.54□□□□□ -1.2
CNGA1-203ENST00000420489 MROH2AA6NES4 1674 aa7.54□□□□□ -1.2
CNGA1-203ENST00000420489 CCDC88BA6NC98 1476 aa7.53□□□□□ -1.2
CNGA1-203ENST00000420489 RICTORQ6R327 1708 aa7.53□□□□□ -1.2
CNGA1-203ENST00000420489 METRNQ9UJH8 293 aa7.52□□□□□ -1.21
CNGA1-203ENST00000420489 ATN1P54259 1190 aaPredicted RBP7.52□□□□□ -1.21
CNGA1-203ENST00000420489 IFNL1Q8IU54 200 aa7.51□□□□□ -1.21
CNGA1-203ENST00000420489 AGLP35573 1532 aa7.51□□□□□ -1.21
CNGA1-203ENST00000420489 TTLL13PA6NNM8 815 aa7.51□□□□□ -1.21
CNGA1-203ENST00000420489 PYGBP11216 843 aa7.51□□□□□ -1.21
CNGA1-203ENST00000420489 CIZ1Q9ULV3 898 aaPredicted RBP7.51□□□□□ -1.21
CNGA1-203ENST00000420489 KDM5CP41229 1560 aa7.51□□□□□ -1.21
CNGA1-203ENST00000420489 CDK13Q14004 1512 aaKnown RBP7.51□□□□□ -1.21
CNGA1-203ENST00000420489 TRAPPC8Q9Y2L5 1435 aa7.51□□□□□ -1.21
CNGA1-203ENST00000420489 ZFYVE16Q7Z3T8 1539 aa7.5□□□□□ -1.21
CNGA1-203ENST00000420489 RAPGEF2Q9Y4G8 1499 aa7.5□□□□□ -1.21
CNGA1-203ENST00000420489 ABCA8O94911 1581 aa7.5□□□□□ -1.21
CNGA1-203ENST00000420489 TMEM106CQ9BVX2 250 aa7.5□□□□□ -1.21
CNGA1-203ENST00000420489 CNTLNQ9NXG0 1405 aa7.49□□□□□ -1.21
CNGA1-203ENST00000420489 POTEAQ6S8J7 498 aa7.49□□□□□ -1.21
CNGA1-203ENST00000420489 CCDC125Q86Z20 511 aa7.49□□□□□ -1.21
CNGA1-203ENST00000420489 PELP1Q8IZL8 1130 aaKnown RBP7.49□□□□□ -1.21
CNGA1-203ENST00000420489 RBM33Q96EV2 1170 aaKnown RBP7.48□□□□□ -1.21
CNGA1-203ENST00000420489 TAOK2Q9UL54 1235 aa7.48□□□□□ -1.21
CNGA1-203ENST00000420489 LRRC7Q96NW7 1537 aa7.48□□□□□ -1.21
CNGA1-203ENST00000420489 SEC24BO95487 1268 aa7.47□□□□□ -1.21
CNGA1-203ENST00000420489 CAMSAP1Q5T5Y3 1602 aa7.47□□□□□ -1.21
CNGA1-203ENST00000420489 PDAP1Q13442 181 aaKnown RBP7.45□□□□□ -1.22
CNGA1-203ENST00000420489 TRIM35Q9UPQ4 493 aa7.45□□□□□ -1.22
CNGA1-203ENST00000420489 FAM135BQ49AJ0 1406 aa7.45□□□□□ -1.22
CNGA1-203ENST00000420489 C3P01024 1663 aa7.45□□□□□ -1.22
CNGA1-203ENST00000420489 SHANK2Q9UPX8 1470 aa7.45□□□□□ -1.22
CNGA1-203ENST00000420489 SCUBE2Q9NQ36 999 aa7.45□□□□□ -1.22
CNGA1-203ENST00000420489 TRPC6Q9Y210 931 aa7.45□□□□□ -1.22
CNGA1-203ENST00000420489 LRRC9Q6ZRR7 1453 aa7.45□□□□□ -1.22
CNGA1-203ENST00000420489 GOLGA2Q08379 1002 aa7.44□□□□□ -1.22
CNGA1-203ENST00000420489 ZNF772Q68DY9 489 aaPredicted RBP7.44□□□□□ -1.22
CNGA1-203ENST00000420489 C9orf84Q5VXU9 1444 aa7.44□□□□□ -1.22
CNGA1-203ENST00000420489 PLCG2P16885 1265 aa7.43□□□□□ -1.22
CNGA1-203ENST00000420489 KIF14Q15058 1648 aa7.43□□□□□ -1.22
CNGA1-203ENST00000420489 DENND4BO75064 1496 aaPredicted RBP7.43□□□□□ -1.22
CNGA1-203ENST00000420489 PSEN1P49768 467 aa7.43□□□□□ -1.22
CNGA1-203ENST00000420489 PCDHB8Q9UN66 801 aa7.43□□□□□ -1.22
CNGA1-203ENST00000420489 NWD1Q149M9 1564 aa7.42□□□□□ -1.22
CNGA1-203ENST00000420489 POLR1AO95602 1720 aaPredicted RBP7.42□□□□□ -1.22
CNGA1-203ENST00000420489 SETBP1Q9Y6X0 1596 aa7.42□□□□□ -1.22
CNGA1-203ENST00000420489 VWDEQ8N2E2 1590 aa7.42□□□□□ -1.22
CNGA1-203ENST00000420489 WRNQ14191 1432 aaPredicted RBP eCLIP7.41□□□□□ -1.22
CNGA1-203ENST00000420489 DEPDC5O75140 1603 aa7.41□□□□□ -1.22
CNGA1-203ENST00000420489 BIVM-ERCC5R4GMW8 1640 aa7.41□□□□□ -1.22
CNGA1-203ENST00000420489 MKRN3Q13064 507 aaKnown RBP7.41□□□□□ -1.22
CNGA1-203ENST00000420489 ATP10AO60312 1499 aa7.41□□□□□ -1.22
CNGA1-203ENST00000420489 OCEL1Q9H607 264 aa7.4□□□□□ -1.23
CNGA1-203ENST00000420489 UGGT2Q9NYU1 1516 aa7.4□□□□□ -1.23
CNGA1-203ENST00000420489 ARID4BQ4LE39 1312 aaPredicted RBP7.39□□□□□ -1.23
CNGA1-203ENST00000420489 SIGLEC1Q9BZZ2 1709 aa7.39□□□□□ -1.23
CNGA1-203ENST00000420489 FGD6Q6ZV73 1430 aa7.39□□□□□ -1.23
CNGA1-203ENST00000420489 MED14O60244 1454 aa7.38□□□□□ -1.23
CNGA1-203ENST00000420489 ATAD2Q6PL18 1390 aa7.38□□□□□ -1.23
CNGA1-203ENST00000420489 KDM5DQ9BY66 1539 aa7.37□□□□□ -1.23
CNGA1-203ENST00000420489 IRX5P78411 483 aaPredicted RBP7.37□□□□□ -1.23
CNGA1-203ENST00000420489 L3MBTL3Q96JM7 780 aaPredicted RBP7.37□□□□□ -1.23
CNGA1-203ENST00000420489 ZNF335Q9H4Z2 1342 aaPredicted RBP7.37□□□□□ -1.23
CNGA1-203ENST00000420489 RIOK3O14730 519 aaKnown RBP7.36□□□□□ -1.23
CNGA1-203ENST00000420489 RAPGEF3O95398 923 aa7.36□□□□□ -1.23
CNGA1-203ENST00000420489 OTUD5Q96G74 571 aa7.36□□□□□ -1.23
CNGA1-203ENST00000420489 VGFO15240 615 aaPredicted RBP7.36□□□□□ -1.23
CNGA1-203ENST00000420489 SHPRHQ149N8 1683 aa7.35□□□□□ -1.23
CNGA1-203ENST00000420489 SPATA31A6Q5VVP1 1343 aa7.35□□□□□ -1.23
CNGA1-203ENST00000420489 MYO3AQ8NEV4 1616 aa7.35□□□□□ -1.23
CNGA1-203ENST00000420489 POTEB2H3BUK9 544 aa7.35□□□□□ -1.23
CNGA1-203ENST00000420489 YY1P25490 414 aa7.34□□□□□ -1.23
CNGA1-203ENST00000420489 IQGAP2Q13576 1575 aa7.34□□□□□ -1.23
CNGA1-203ENST00000420489 POTEFA5A3E0 1075 aa7.34□□□□□ -1.23
CNGA1-203ENST00000420489 SUPT6HQ7KZ85 1726 aaKnown RBP7.34□□□□□ -1.24
CNGA1-203ENST00000420489 FAM135AQ9P2D6 1515 aa7.33□□□□□ -1.24
CNGA1-203ENST00000420489 CEP170BQ9Y4F5 1589 aaPredicted RBP7.33□□□□□ -1.24
CNGA1-203ENST00000420489 COLQQ9Y215 455 aaPredicted RBP7.33□□□□□ -1.24
CNGA1-203ENST00000420489 DISP1Q96F81 1524 aa7.33□□□□□ -1.24
CNGA1-203ENST00000420489 ATP10BO94823 1461 aa7.32□□□□□ -1.24
CNGA1-203ENST00000420489 JCADQ9P266 1359 aa7.31□□□□□ -1.24
CNGA1-203ENST00000420489 UNC13BO14795 1591 aa7.31□□□□□ -1.24
CNGA1-203ENST00000420489 NEURL4Q96JN8 1562 aa7.31□□□□□ -1.24
CNGA1-203ENST00000420489 G3V3G9 751 aa7.31□□□□□ -1.24
CNGA1-203ENST00000420489 SENP3-EIF4A1A0A087X0R7 540 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms