RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
SP140-204ENST00000417495 CDK13Q14004 1512 aaKnown RBP12.25□□□□□ -0.45
SP140-204ENST00000417495 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
SP140-204ENST00000417495 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
SP140-204ENST00000417495 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
SP140-204ENST00000417495 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
SP140-204ENST00000417495 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
SP140-204ENST00000417495 ADGRL2O95490 1459 aa12.24□□□□□ -0.45
SP140-204ENST00000417495 KIF14Q15058 1648 aa12.23□□□□□ -0.45
SP140-204ENST00000417495 SHANK2Q9UPX8 1470 aa12.23□□□□□ -0.45
SP140-204ENST00000417495 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
SP140-204ENST00000417495 UACAQ9BZF9 1416 aa12.23□□□□□ -0.45
SP140-204ENST00000417495 KCTD17Q8N5Z5 321 aa12.22□□□□□ -0.45
SP140-204ENST00000417495 ABCC10Q5T3U5 1492 aa12.22□□□□□ -0.45
SP140-204ENST00000417495 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
SP140-204ENST00000417495 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
SP140-204ENST00000417495 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
SP140-204ENST00000417495 NAIPQ13075 1403 aa12.21□□□□□ -0.45
SP140-204ENST00000417495 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
SP140-204ENST00000417495 MTMR7Q9Y216 660 aa12.2□□□□□ -0.46
SP140-204ENST00000417495 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
SP140-204ENST00000417495 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
SP140-204ENST00000417495 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
SP140-204ENST00000417495 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
SP140-204ENST00000417495 RAD21O60216 631 aa12.19□□□□□ -0.46
SP140-204ENST00000417495 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
SP140-204ENST00000417495 DHX37Q8IY37 1157 aaKnown RBP12.18□□□□□ -0.46
SP140-204ENST00000417495 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
SP140-204ENST00000417495 ARAP3Q8WWN8 1544 aa12.18□□□□□ -0.46
SP140-204ENST00000417495 ATP10BO94823 1461 aa12.18□□□□□ -0.46
SP140-204ENST00000417495 PTPRKQ15262 1439 aa12.17□□□□□ -0.46
SP140-204ENST00000417495 PREX2Q70Z35 1606 aa12.17□□□□□ -0.46
SP140-204ENST00000417495 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
SP140-204ENST00000417495 PLB1Q6P1J6 1458 aa12.16□□□□□ -0.46
SP140-204ENST00000417495 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
SP140-204ENST00000417495 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
SP140-204ENST00000417495 DAPK1P53355 1430 aa12.16□□□□□ -0.46
SP140-204ENST00000417495 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
SP140-204ENST00000417495 NAP1L5Q96NT1 182 aaPredicted RBP12.14□□□□□ -0.47
SP140-204ENST00000417495 KDM5DQ9BY66 1539 aa12.14□□□□□ -0.47
SP140-204ENST00000417495 CCDC82Q8N4S0 544 aa12.14□□□□□ -0.47
SP140-204ENST00000417495 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
SP140-204ENST00000417495 PTPRGP23470 1445 aa12.13□□□□□ -0.47
SP140-204ENST00000417495 CAMSAP2Q08AD1 1489 aa12.13□□□□□ -0.47
SP140-204ENST00000417495 ZNF316A6NFI3 1004 aaPredicted RBP12.12□□□□□ -0.47
SP140-204ENST00000417495 ABCC5O15440 1437 aa12.12□□□□□ -0.47
SP140-204ENST00000417495 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
SP140-204ENST00000417495 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
SP140-204ENST00000417495 C11orf95C9JLR9 678 aaPredicted RBP12.1□□□□□ -0.47
SP140-204ENST00000417495 CDK11BP21127 795 aaKnown RBP12.1□□□□□ -0.47
SP140-204ENST00000417495 RBM25P49756 843 aaKnown RBP12.09□□□□□ -0.47
SP140-204ENST00000417495 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
SP140-204ENST00000417495 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
SP140-204ENST00000417495 FAM50AQ14320 339 aaKnown RBP12.08□□□□□ -0.47
SP140-204ENST00000417495 PLXNC1O60486 1568 aa12.08□□□□□ -0.48
SP140-204ENST00000417495 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
SP140-204ENST00000417495 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
SP140-204ENST00000417495 ZCCHC11Q5TAX3 1644 aaKnown RBP12.07□□□□□ -0.48
SP140-204ENST00000417495 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
SP140-204ENST00000417495 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
SP140-204ENST00000417495 BCCIPQ9P287 314 aaKnown RBP eCLIP12.05□□□□□ -0.48
SP140-204ENST00000417495 NAP1L2Q9ULW6 460 aaPredicted RBP12.04□□□□□ -0.48
SP140-204ENST00000417495 NCOA1Q15788 1441 aa12.04□□□□□ -0.48
SP140-204ENST00000417495 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
SP140-204ENST00000417495 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
SP140-204ENST00000417495 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
SP140-204ENST00000417495 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
SP140-204ENST00000417495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.02□□□□□ -0.48
SP140-204ENST00000417495 UNC13BO14795 1591 aa12.02□□□□□ -0.49
SP140-204ENST00000417495 KDM6BO15054 1643 aa12.02□□□□□ -0.49
SP140-204ENST00000417495 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.49
SP140-204ENST00000417495 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
SP140-204ENST00000417495 HSP90B1P14625 803 aaKnown RBP12.01□□□□□ -0.49
SP140-204ENST00000417495 SEMA3EO15041 775 aa12□□□□□ -0.49
SP140-204ENST00000417495 ANKRD30AQ9BXX3 1397 aa12□□□□□ -0.49
SP140-204ENST00000417495 ERCC6L2Q5T890 1561 aa12□□□□□ -0.49
SP140-204ENST00000417495 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
SP140-204ENST00000417495 TTC37Q6PGP7 1564 aa11.99□□□□□ -0.49
SP140-204ENST00000417495 IPO4Q8TEX9 1081 aaKnown RBP11.98□□□□□ -0.49
SP140-204ENST00000417495 MAGI2Q86UL8 1455 aa11.98□□□□□ -0.49
SP140-204ENST00000417495 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
SP140-204ENST00000417495 PZPP20742 1482 aa11.97□□□□□ -0.49
SP140-204ENST00000417495 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
SP140-204ENST00000417495 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
SP140-204ENST00000417495 RPRD2Q5VT52 1461 aaKnown RBP11.97□□□□□ -0.49
SP140-204ENST00000417495 PLCH2O75038 1416 aa11.97□□□□□ -0.49
SP140-204ENST00000417495 ABCC1P33527 1531 aa11.97□□□□□ -0.49
SP140-204ENST00000417495 C9orf84Q5VXU9 1444 aa11.96□□□□□ -0.49
SP140-204ENST00000417495 CFAP74Q9C0B2 1584 aa11.96□□□□□ -0.49
SP140-204ENST00000417495 CFDP1Q9UEE9 299 aaPredicted RBP11.96□□□□□ -0.49
SP140-204ENST00000417495 RTEL1-TNFRSF6BF6WH68 1400 aa11.95□□□□□ -0.5
SP140-204ENST00000417495 TEX14Q8IWB6 1497 aa11.95□□□□□ -0.5
SP140-204ENST00000417495 MIER1Q8N108 512 aa11.95□□□□□ -0.5
SP140-204ENST00000417495 POLR1AO95602 1720 aaPredicted RBP11.94□□□□□ -0.5
SP140-204ENST00000417495 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
SP140-204ENST00000417495 RTL5Q5HYW3 569 aaPredicted RBP11.94□□□□□ -0.5
SP140-204ENST00000417495 ARHGEF12Q9NZN5 1544 aa11.94□□□□□ -0.5
SP140-204ENST00000417495 IQGAP3Q86VI3 1631 aa11.94□□□□□ -0.5
SP140-204ENST00000417495 ANKRD30BQ9BXX2 1392 aa11.94□□□□□ -0.5
SP140-204ENST00000417495 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms