RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SIGLEC1Q9BZZ2 1709 aa21.59■■□□□ 1.05
SGCE-202ENST00000415788 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
SGCE-202ENST00000415788 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
SGCE-202ENST00000415788 GGT6Q6P531 493 aa21.56■■□□□ 1.04
SGCE-202ENST00000415788 RAB3GAP2Q9H2M9 1393 aa21.54■■□□□ 1.04
SGCE-202ENST00000415788 FAM135AQ9P2D6 1515 aa21.54■■□□□ 1.04
SGCE-202ENST00000415788 DEPDC5O75140 1603 aa21.53■■□□□ 1.04
SGCE-202ENST00000415788 PRDM15P57071 1507 aaPredicted RBP21.53■■□□□ 1.04
SGCE-202ENST00000415788 MLECQ14165 292 aa21.53■■□□□ 1.04
SGCE-202ENST00000415788 KANK1Q14678 1352 aa21.53■■□□□ 1.04
SGCE-202ENST00000415788 UNC13BO14795 1591 aa21.51■■□□□ 1.03
SGCE-202ENST00000415788 MROH1Q8NDA8 1641 aa21.5■■□□□ 1.03
SGCE-202ENST00000415788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.49■■□□□ 1.03
SGCE-202ENST00000415788 ESF1Q9H501 851 aaKnown RBP21.49■■□□□ 1.03
SGCE-202ENST00000415788 KDM5DQ9BY66 1539 aa21.48■■□□□ 1.03
SGCE-202ENST00000415788 CNTLNQ9NXG0 1405 aa21.48■■□□□ 1.03
SGCE-202ENST00000415788 NUP155O75694 1391 aa21.48■■□□□ 1.03
SGCE-202ENST00000415788 WASHC2CQ9Y4E1 1318 aa21.48■■□□□ 1.03
SGCE-202ENST00000415788 VWDEQ8N2E2 1590 aa21.47■■□□□ 1.03
SGCE-202ENST00000415788 TRIM52Q96A61 297 aa21.46■■□□□ 1.03
SGCE-202ENST00000415788 ADAMTSL3P82987 1691 aa21.45■■□□□ 1.02
SGCE-202ENST00000415788 ZC3H13Q5T200 1668 aaKnown RBP21.44■■□□□ 1.02
SGCE-202ENST00000415788 ABCC3O15438 1527 aa21.44■■□□□ 1.02
SGCE-202ENST00000415788 LMTK2Q8IWU2 1503 aa21.43■■□□□ 1.02
SGCE-202ENST00000415788 IQGAP3Q86VI3 1631 aa21.43■■□□□ 1.02
SGCE-202ENST00000415788 MADDQ8WXG6 1647 aa21.4■■□□□ 1.02
SGCE-202ENST00000415788 FER1L4A9Z1Z3 1794 aa21.4■■□□□ 1.02
SGCE-202ENST00000415788 PZPP20742 1482 aa21.37■■□□□ 1.01
SGCE-202ENST00000415788 CLTCQ00610 1675 aaKnown RBP21.37■■□□□ 1.01
SGCE-202ENST00000415788 ZMYM3Q14202 1370 aa21.37■■□□□ 1.01
SGCE-202ENST00000415788 ARHGAP31Q2M1Z3 1444 aa21.37■■□□□ 1.01
SGCE-202ENST00000415788 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
SGCE-202ENST00000415788 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
SGCE-202ENST00000415788 KDM4FA0A1W2PPD8 638 aa21.36■■□□□ 1.01
SGCE-202ENST00000415788 TET3O43151 1660 aa21.36■■□□□ 1.01
SGCE-202ENST00000415788 CEP152O94986 1710 aa21.35■■□□□ 1.01
SGCE-202ENST00000415788 EFCAB6Q5THR3 1501 aa21.35■■□□□ 1.01
SGCE-202ENST00000415788 MPHOSPH9Q99550 1183 aa21.35■■□□□ 1.01
SGCE-202ENST00000415788 RPRD2Q5VT52 1461 aaKnown RBP21.34■■□□□ 1.01
SGCE-202ENST00000415788 CAMSAP1Q5T5Y3 1602 aa21.34■■□□□ 1.01
SGCE-202ENST00000415788 RIMS1Q86UR5 1692 aaKnown RBP21.34■■□□□ 1.01
SGCE-202ENST00000415788 PTPRMP28827 1452 aa21.32■■□□□ 1
SGCE-202ENST00000415788 NPATQ14207 1427 aa21.32■■□□□ 1
SGCE-202ENST00000415788 PKD2Q13563 968 aa21.3■■□□□ 1
SGCE-202ENST00000415788 C3P01024 1663 aa21.26■□□□□ 0.99
SGCE-202ENST00000415788 E9PCH4 1651 aa21.26■□□□□ 0.99
SGCE-202ENST00000415788 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
SGCE-202ENST00000415788 ERVK-7P63135 1459 aa21.24■□□□□ 0.99
SGCE-202ENST00000415788 SPATA31D1Q6ZQQ2 1576 aa21.23■□□□□ 0.99
SGCE-202ENST00000415788 DHX57Q6P158 1386 aaKnown RBP21.23■□□□□ 0.99
SGCE-202ENST00000415788 NOS1P29475 1434 aa21.23■□□□□ 0.99
SGCE-202ENST00000415788 FBXO31Q5XUX0 539 aaPredicted RBP21.22■□□□□ 0.99
SGCE-202ENST00000415788 PTPRTO14522 1441 aa21.22■□□□□ 0.99
SGCE-202ENST00000415788 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
SGCE-202ENST00000415788 PREX1Q8TCU6 1659 aa21.2■□□□□ 0.98
SGCE-202ENST00000415788 TNRQ92752 1358 aa21.2■□□□□ 0.98
SGCE-202ENST00000415788 FOXD1Q16676 465 aa21.19■□□□□ 0.98
SGCE-202ENST00000415788 SLC52A1Q9NWF4 448 aa21.17■□□□□ 0.98
SGCE-202ENST00000415788 TRPM2O94759 1503 aa21.17■□□□□ 0.98
SGCE-202ENST00000415788 SPHKAPQ2M3C7 1700 aa21.15■□□□□ 0.98
SGCE-202ENST00000415788 PLA2R1Q13018 1463 aa21.15■□□□□ 0.98
SGCE-202ENST00000415788 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
SGCE-202ENST00000415788 ANKRD30BQ9BXX2 1392 aa21.15■□□□□ 0.98
SGCE-202ENST00000415788 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
SGCE-202ENST00000415788 SYNMO15061 1565 aa21.14■□□□□ 0.97
SGCE-202ENST00000415788 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
SGCE-202ENST00000415788 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
SGCE-202ENST00000415788 CFAP65Q6ZU64 1925 aaKnown RBP21.1■□□□□ 0.97
SGCE-202ENST00000415788 CLSPNQ9HAW4 1339 aa21.1■□□□□ 0.97
SGCE-202ENST00000415788 UHRF1BP1Q6BDS2 1440 aa21.09■□□□□ 0.97
SGCE-202ENST00000415788 IDI1Q13907 227 aa21.09■□□□□ 0.97
SGCE-202ENST00000415788 PIK3C2BO00750 1634 aa21.09■□□□□ 0.97
SGCE-202ENST00000415788 MYO3AQ8NEV4 1616 aa21.08■□□□□ 0.97
SGCE-202ENST00000415788 UGGT1Q9NYU2 1555 aa21.07■□□□□ 0.96
SGCE-202ENST00000415788 A2ML1A8K2U0 1454 aa21.07■□□□□ 0.96
SGCE-202ENST00000415788 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
SGCE-202ENST00000415788 CLTCL1P53675 1640 aa21.05■□□□□ 0.96
SGCE-202ENST00000415788 CEP170BQ9Y4F5 1589 aaPredicted RBP21.04■□□□□ 0.96
SGCE-202ENST00000415788 STAG3Q9UJ98 1225 aa21.04■□□□□ 0.96
SGCE-202ENST00000415788 ZNF142P52746 1687 aaPredicted RBP21.03■□□□□ 0.96
SGCE-202ENST00000415788 KDM5AP29375 1690 aaKnown RBP21.02■□□□□ 0.96
SGCE-202ENST00000415788 ADGRB3O60242 1522 aa21.02■□□□□ 0.96
SGCE-202ENST00000415788 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
SGCE-202ENST00000415788 THEMISQ8N1K5 641 aaPredicted RBP21.01■□□□□ 0.95
SGCE-202ENST00000415788 NEURL4Q96JN8 1562 aa21■□□□□ 0.95
SGCE-202ENST00000415788 CHGAP10645 457 aaKnown RBP20.99■□□□□ 0.95
SGCE-202ENST00000415788 TMEM131LA2VDJ0 1609 aa20.98■□□□□ 0.95
SGCE-202ENST00000415788 LMTK3Q96Q04 1460 aa20.98■□□□□ 0.95
SGCE-202ENST00000415788 SPATA31E1Q6ZUB1 1445 aa20.97■□□□□ 0.95
SGCE-202ENST00000415788 UBR1Q8IWV7 1749 aa20.96■□□□□ 0.95
SGCE-202ENST00000415788 KIF1BO60333 1816 aa20.96■□□□□ 0.95
SGCE-202ENST00000415788 SIN3AQ96ST3 1273 aa20.96■□□□□ 0.95
SGCE-202ENST00000415788 RPGRIP1LQ68CZ1 1315 aa20.94■□□□□ 0.94
SGCE-202ENST00000415788 TMEM2Q9UHN6 1383 aa20.93■□□□□ 0.94
SGCE-202ENST00000415788 HDGFP51858 240 aaKnown RBP20.93■□□□□ 0.94
SGCE-202ENST00000415788 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
SGCE-202ENST00000415788 ZNF326Q5BKZ1 582 aaKnown RBP20.93■□□□□ 0.94
SGCE-202ENST00000415788 SLIT1O75093 1534 aa20.92■□□□□ 0.94
SGCE-202ENST00000415788 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
SGCE-202ENST00000415788 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms