RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
CNN3-203ENST00000415017 ACIN1Q9UKV3 1341 aaKnown RBP19.92■□□□□ 0.78
CNN3-203ENST00000415017 KDM5DQ9BY66 1539 aa19.91■□□□□ 0.78
CNN3-203ENST00000415017 VWDEQ8N2E2 1590 aa19.91■□□□□ 0.78
CNN3-203ENST00000415017 PRDM15P57071 1507 aaPredicted RBP19.89■□□□□ 0.77
CNN3-203ENST00000415017 MYT1LQ9UL68 1186 aa19.87■□□□□ 0.77
CNN3-203ENST00000415017 IQGAP3Q86VI3 1631 aa19.86■□□□□ 0.77
CNN3-203ENST00000415017 FAM135AQ9P2D6 1515 aa19.83■□□□□ 0.77
CNN3-203ENST00000415017 PZPP20742 1482 aa19.82■□□□□ 0.76
CNN3-203ENST00000415017 LMTK2Q8IWU2 1503 aa19.81■□□□□ 0.76
CNN3-203ENST00000415017 KIF3BO15066 747 aa19.81■□□□□ 0.76
CNN3-203ENST00000415017 ZC3H13Q5T200 1668 aaKnown RBP19.8■□□□□ 0.76
CNN3-203ENST00000415017 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
CNN3-203ENST00000415017 TET3O43151 1660 aa19.77■□□□□ 0.76
CNN3-203ENST00000415017 CEP152O94986 1710 aa19.76■□□□□ 0.75
CNN3-203ENST00000415017 ABCC3O15438 1527 aa19.76■□□□□ 0.75
CNN3-203ENST00000415017 NUP155O75694 1391 aa19.75■□□□□ 0.75
CNN3-203ENST00000415017 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
CNN3-203ENST00000415017 ADAMTSL3P82987 1691 aa19.74■□□□□ 0.75
CNN3-203ENST00000415017 CAMSAP1Q5T5Y3 1602 aa19.72■□□□□ 0.75
CNN3-203ENST00000415017 MROH2AA6NES4 1674 aa19.71■□□□□ 0.75
CNN3-203ENST00000415017 E9PCH4 1651 aa19.71■□□□□ 0.75
CNN3-203ENST00000415017 EFCAB6Q5THR3 1501 aa19.71■□□□□ 0.75
CNN3-203ENST00000415017 KANK1Q14678 1352 aa19.7■□□□□ 0.74
CNN3-203ENST00000415017 ARHGAP31Q2M1Z3 1444 aa19.7■□□□□ 0.74
CNN3-203ENST00000415017 GGT6Q6P531 493 aa19.7■□□□□ 0.74
CNN3-203ENST00000415017 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
CNN3-203ENST00000415017 CLTCQ00610 1675 aaKnown RBP19.7■□□□□ 0.74
CNN3-203ENST00000415017 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
CNN3-203ENST00000415017 FER1L4A9Z1Z3 1794 aa19.69■□□□□ 0.74
CNN3-203ENST00000415017 RPRD2Q5VT52 1461 aaKnown RBP19.67■□□□□ 0.74
CNN3-203ENST00000415017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.747e-7■■□□□ 11.5
CNN3-203ENST00000415017 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
CNN3-203ENST00000415017 CNTLNQ9NXG0 1405 aa19.65■□□□□ 0.74
CNN3-203ENST00000415017 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.73
CNN3-203ENST00000415017 WASHC2CQ9Y4E1 1318 aa19.64■□□□□ 0.73
CNN3-203ENST00000415017 MADDQ8WXG6 1647 aa19.63■□□□□ 0.73
CNN3-203ENST00000415017 PTPRTO14522 1441 aa19.63■□□□□ 0.73
CNN3-203ENST00000415017 NPATQ14207 1427 aa19.63■□□□□ 0.73
CNN3-203ENST00000415017 SPHKAPQ2M3C7 1700 aa19.62■□□□□ 0.73
CNN3-203ENST00000415017 PLA2R1Q13018 1463 aa19.61■□□□□ 0.73
CNN3-203ENST00000415017 CLSPNQ9HAW4 1339 aa19.61■□□□□ 0.73
CNN3-203ENST00000415017 PKD2Q13563 968 aa19.61■□□□□ 0.73
CNN3-203ENST00000415017 C3P01024 1663 aa19.61■□□□□ 0.73
CNN3-203ENST00000415017 ANKRD30BQ9BXX2 1392 aa19.6■□□□□ 0.73
CNN3-203ENST00000415017 PREX1Q8TCU6 1659 aa19.6■□□□□ 0.73
CNN3-203ENST00000415017 MLECQ14165 292 aa19.59■□□□□ 0.73
CNN3-203ENST00000415017 NOS1P29475 1434 aa19.59■□□□□ 0.73
CNN3-203ENST00000415017 CFAP65Q6ZU64 1925 aaKnown RBP19.59■□□□□ 0.73
CNN3-203ENST00000415017 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.72
CNN3-203ENST00000415017 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
CNN3-203ENST00000415017 SPATA31D1Q6ZQQ2 1576 aa19.57■□□□□ 0.72
CNN3-203ENST00000415017 TRPM2O94759 1503 aa19.56■□□□□ 0.72
CNN3-203ENST00000415017 PIK3C2BO00750 1634 aa19.55■□□□□ 0.72
CNN3-203ENST00000415017 SYNMO15061 1565 aa19.54■□□□□ 0.72
CNN3-203ENST00000415017 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
CNN3-203ENST00000415017 FOXD1Q16676 465 aa19.53■□□□□ 0.72
CNN3-203ENST00000415017 CLTCL1P53675 1640 aa19.5■□□□□ 0.71
CNN3-203ENST00000415017 NEURL4Q96JN8 1562 aa19.49■□□□□ 0.71
CNN3-203ENST00000415017 ESF1Q9H501 851 aaKnown RBP19.49■□□□□ 0.71
CNN3-203ENST00000415017 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
CNN3-203ENST00000415017 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
CNN3-203ENST00000415017 PTPRMP28827 1452 aa19.48■□□□□ 0.71
CNN3-203ENST00000415017 FBXO31Q5XUX0 539 aaPredicted RBP19.47■□□□□ 0.71
CNN3-203ENST00000415017 KDM4FA0A1W2PPD8 638 aa19.46■□□□□ 0.71
CNN3-203ENST00000415017 KDM5AP29375 1690 aaKnown RBP19.46■□□□□ 0.71
CNN3-203ENST00000415017 KIF1BO60333 1816 aa19.45■□□□□ 0.7
CNN3-203ENST00000415017 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
CNN3-203ENST00000415017 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
CNN3-203ENST00000415017 SLC52A1Q9NWF4 448 aa19.42■□□□□ 0.7
CNN3-203ENST00000415017 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
CNN3-203ENST00000415017 CEBPAP49715 358 aaPredicted RBP19.41■□□□□ 0.7
CNN3-203ENST00000415017 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
CNN3-203ENST00000415017 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
CNN3-203ENST00000415017 TNRQ92752 1358 aa19.4■□□□□ 0.7
CNN3-203ENST00000415017 NLRP1Q9C000 1473 aa19.4■□□□□ 0.7
CNN3-203ENST00000415017 ADGRB3O60242 1522 aa19.4■□□□□ 0.7
CNN3-203ENST00000415017 MYO5BQ9ULV0 1848 aa19.39■□□□□ 0.7
CNN3-203ENST00000415017 MYO3AQ8NEV4 1616 aa19.39■□□□□ 0.69
CNN3-203ENST00000415017 ZNF142P52746 1687 aaPredicted RBP19.39■□□□□ 0.69
CNN3-203ENST00000415017 UBR1Q8IWV7 1749 aa19.37■□□□□ 0.69
CNN3-203ENST00000415017 IDI1Q13907 227 aa19.37■□□□□ 0.69
CNN3-203ENST00000415017 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
CNN3-203ENST00000415017 IFT172Q9UG01 1749 aa19.37■□□□□ 0.69
CNN3-203ENST00000415017 PPLO60437 1756 aa19.32■□□□□ 0.68
CNN3-203ENST00000415017 A2ML1A8K2U0 1454 aa19.32■□□□□ 0.68
CNN3-203ENST00000415017 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
CNN3-203ENST00000415017 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
CNN3-203ENST00000415017 NEXMIFQ5QGS0 1516 aa19.28■□□□□ 0.68
CNN3-203ENST00000415017 ARHGAP23Q9P227 1491 aa19.27■□□□□ 0.67
CNN3-203ENST00000415017 SLIT1O75093 1534 aa19.26■□□□□ 0.67
CNN3-203ENST00000415017 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
CNN3-203ENST00000415017 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
CNN3-203ENST00000415017 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
CNN3-203ENST00000415017 MYOM2P54296 1465 aa19.24■□□□□ 0.67
CNN3-203ENST00000415017 NRXN1Q9ULB1 1477 aa19.24■□□□□ 0.67
CNN3-203ENST00000415017 STAC3Q96MF2 364 aa19.24■□□□□ 0.67
CNN3-203ENST00000415017 TONSLQ96HA7 1378 aa19.23■□□□□ 0.67
CNN3-203ENST00000415017 UHRF1BP1Q6BDS2 1440 aa19.23■□□□□ 0.67
CNN3-203ENST00000415017 PPP1R15AO75807 674 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms