RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 NFKBIBQ15653 356 aa18.08■□□□□ 0.48
LINC00887-202ENST00000414120 LAS1LQ9Y4W2 734 aaKnown RBP18.07■□□□□ 0.48
LINC00887-202ENST00000414120 ABCC2Q92887 1545 aa18.07■□□□□ 0.48
LINC00887-202ENST00000414120 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
LINC00887-202ENST00000414120 ABCA8O94911 1581 aa18.06■□□□□ 0.48
LINC00887-202ENST00000414120 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
LINC00887-202ENST00000414120 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
LINC00887-202ENST00000414120 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
LINC00887-202ENST00000414120 IRX3P78415 501 aaPredicted RBP18.04■□□□□ 0.48
LINC00887-202ENST00000414120 ATP10BO94823 1461 aa18.04■□□□□ 0.48
LINC00887-202ENST00000414120 FYCO1Q9BQS8 1478 aa18.04■□□□□ 0.48
LINC00887-202ENST00000414120 CNPY4Q8N129 248 aa18.04■□□□□ 0.48
LINC00887-202ENST00000414120 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
LINC00887-202ENST00000414120 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
LINC00887-202ENST00000414120 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
LINC00887-202ENST00000414120 HMGB1P09429 215 aaKnown RBP18.02■□□□□ 0.48
LINC00887-202ENST00000414120 HECW1Q76N89 1606 aa18.02■□□□□ 0.47
LINC00887-202ENST00000414120 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.47
LINC00887-202ENST00000414120 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
LINC00887-202ENST00000414120 AXDND1Q5T1B0 1012 aaPredicted RBP18.01■□□□□ 0.47
LINC00887-202ENST00000414120 PTMAP06454 111 aaKnown RBP18.01■□□□□ 0.47
LINC00887-202ENST00000414120 FOXD1Q16676 465 aa18■□□□□ 0.47
LINC00887-202ENST00000414120 TICAM2Q86XR7 235 aa18■□□□□ 0.47
LINC00887-202ENST00000414120 SLC20A2Q08357 652 aa17.99■□□□□ 0.47
LINC00887-202ENST00000414120 UHRF1BP1LA0JNW5 1464 aa17.99■□□□□ 0.47
LINC00887-202ENST00000414120 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.47
LINC00887-202ENST00000414120 GTPBP4Q9BZE4 634 aaKnown RBP17.97■□□□□ 0.47
LINC00887-202ENST00000414120 ASXL2Q76L83 1435 aa17.97■□□□□ 0.47
LINC00887-202ENST00000414120 PTMSP20962 102 aa17.97■□□□□ 0.47
LINC00887-202ENST00000414120 KDM5BQ9UGL1 1544 aa17.96■□□□□ 0.47
LINC00887-202ENST00000414120 FAM69CQ0P6D2 419 aa17.96■□□□□ 0.47
LINC00887-202ENST00000414120 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
LINC00887-202ENST00000414120 LETM1O95202 739 aaPredicted RBP17.94■□□□□ 0.46
LINC00887-202ENST00000414120 IRX6P78412 446 aaPredicted RBP17.94■□□□□ 0.46
LINC00887-202ENST00000414120 PLCD3Q8N3E9 789 aa17.94■□□□□ 0.46
LINC00887-202ENST00000414120 CCDC18Q5T9S5 1454 aa17.93■□□□□ 0.46
LINC00887-202ENST00000414120 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
LINC00887-202ENST00000414120 GOLGA6L3A6NEY3 463 aa17.93■□□□□ 0.46
LINC00887-202ENST00000414120 KCNG1Q9UIX4 513 aa17.92■□□□□ 0.46
LINC00887-202ENST00000414120 WWC1Q8IX03 1113 aa17.91■□□□□ 0.46
LINC00887-202ENST00000414120 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
LINC00887-202ENST00000414120 MCCP23508 829 aa17.9■□□□□ 0.46
LINC00887-202ENST00000414120 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
LINC00887-202ENST00000414120 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.46
LINC00887-202ENST00000414120 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.46
LINC00887-202ENST00000414120 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.89■□□□□ 0.45
LINC00887-202ENST00000414120 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
LINC00887-202ENST00000414120 TIAM1Q13009 1591 aa17.88■□□□□ 0.45
LINC00887-202ENST00000414120 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
LINC00887-202ENST00000414120 FAM193AP78312 1265 aa17.87■□□□□ 0.45
LINC00887-202ENST00000414120 TROQ12816 1431 aaPredicted RBP17.87■□□□□ 0.45
LINC00887-202ENST00000414120 MAGI3Q5TCQ9 1506 aa17.87■□□□□ 0.45
LINC00887-202ENST00000414120 CLSTN1O94985 981 aa17.86■□□□□ 0.45
LINC00887-202ENST00000414120 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
LINC00887-202ENST00000414120 MS4A1P11836 297 aa17.85■□□□□ 0.45
LINC00887-202ENST00000414120 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
LINC00887-202ENST00000414120 TPRNQ4KMQ1 711 aa17.85■□□□□ 0.45
LINC00887-202ENST00000414120 TRIM44Q96DX7 344 aaPredicted RBP17.85■□□□□ 0.45
LINC00887-202ENST00000414120 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
LINC00887-202ENST00000414120 YY1AP1Q9H869 796 aa17.83■□□□□ 0.44
LINC00887-202ENST00000414120 PHF14O94880 888 aa17.82■□□□□ 0.44
LINC00887-202ENST00000414120 PSEN1P49768 467 aa17.82■□□□□ 0.44
LINC00887-202ENST00000414120 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
LINC00887-202ENST00000414120 ZSCAN20P17040 1043 aaPredicted RBP17.81■□□□□ 0.44
LINC00887-202ENST00000414120 VGLL3A8MV65 326 aa17.8■□□□□ 0.44
LINC00887-202ENST00000414120 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
LINC00887-202ENST00000414120 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
LINC00887-202ENST00000414120 ANP32CO43423 234 aa17.79■□□□□ 0.44
LINC00887-202ENST00000414120 KIF14Q15058 1648 aa17.79■□□□□ 0.44
LINC00887-202ENST00000414120 DNTTIP2Q5QJE6 756 aaKnown RBP17.78■□□□□ 0.44
LINC00887-202ENST00000414120 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
LINC00887-202ENST00000414120 CFAP43Q8NDM7 1665 aa17.78■□□□□ 0.44
LINC00887-202ENST00000414120 PPP1R15AO75807 674 aaPredicted RBP17.78■□□□□ 0.44
LINC00887-202ENST00000414120 EHBP1L1Q8N3D4 1523 aa17.78■□□□□ 0.44
LINC00887-202ENST00000414120 ESPNB1AK53 854 aa17.77■□□□□ 0.44
LINC00887-202ENST00000414120 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
LINC00887-202ENST00000414120 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.44
LINC00887-202ENST00000414120 DNAJC2Q99543 621 aaKnown RBP17.77■□□□□ 0.44
LINC00887-202ENST00000414120 DHX57Q6P158 1386 aaKnown RBP17.76■□□□□ 0.43
LINC00887-202ENST00000414120 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
LINC00887-202ENST00000414120 ABCC10Q5T3U5 1492 aa17.76■□□□□ 0.43
LINC00887-202ENST00000414120 CEP120Q8N960 986 aa17.76■□□□□ 0.43
LINC00887-202ENST00000414120 BACH2Q9BYV9 841 aa17.75■□□□□ 0.43
LINC00887-202ENST00000414120 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
LINC00887-202ENST00000414120 PHLDB1Q86UU1 1377 aa17.74■□□□□ 0.43
LINC00887-202ENST00000414120 PLCD4Q9BRC7 762 aa17.74■□□□□ 0.43
LINC00887-202ENST00000414120 ZNF644Q9H582 1327 aaPredicted RBP17.73■□□□□ 0.43
LINC00887-202ENST00000414120 GEMIN8Q9NWZ8 242 aaKnown RBP17.73■□□□□ 0.43
LINC00887-202ENST00000414120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC00887-202ENST00000414120 FSD2A1L4K1 749 aa17.72■□□□□ 0.43
LINC00887-202ENST00000414120 KIAA1211Q6ZU35 1233 aa17.72■□□□□ 0.43
LINC00887-202ENST00000414120 TTC37Q6PGP7 1564 aa17.72■□□□□ 0.43
LINC00887-202ENST00000414120 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
LINC00887-202ENST00000414120 ISY1Q9ULR0 285 aaKnown RBP17.72■□□□□ 0.43
LINC00887-202ENST00000414120 RIPK4P57078 832 aa17.71■□□□□ 0.43
LINC00887-202ENST00000414120 TSPOAP1O95153 1857 aa17.71■□□□□ 0.43
LINC00887-202ENST00000414120 DIP2BQ9P265 1576 aa17.71■□□□□ 0.43
LINC00887-202ENST00000414120 APPP05067 770 aa17.7■□□□□ 0.42
LINC00887-202ENST00000414120 PRDM10Q9NQV6 1147 aa17.7■□□□□ 0.42
LINC00887-202ENST00000414120 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms