RNA–Protein interactions for RNA: ENST00000411539.6

SEMA4B-202, Transcript of semaphorin 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4B, Length 3,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-202ENST00000411539 FAM43AQ8N2R8 423 aa20.93■□□□□ 0.94
SEMA4B-202ENST00000411539 POGKQ9P215 609 aa20.92■□□□□ 0.94
SEMA4B-202ENST00000411539 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
SEMA4B-202ENST00000411539 CENPJQ9HC77 1338 aaPredicted RBP20.91■□□□□ 0.94
SEMA4B-202ENST00000411539 EFCAB5A4FU69 1503 aa20.91■□□□□ 0.94
SEMA4B-202ENST00000411539 NBPF1Q3BBV0 1214 aa20.9■□□□□ 0.94
SEMA4B-202ENST00000411539 MAPK8IP3Q9UPT6 1336 aa20.89■□□□□ 0.93
SEMA4B-202ENST00000411539 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
SEMA4B-202ENST00000411539 RWDD1Q9H446 243 aaPredicted RBP20.88■□□□□ 0.93
SEMA4B-202ENST00000411539 MIA2Q96PC5 1412 aa20.88■□□□□ 0.93
SEMA4B-202ENST00000411539 PMFBP1Q8TBY8 1022 aa20.87■□□□□ 0.93
SEMA4B-202ENST00000411539 PANK1Q8TE04 598 aa20.87■□□□□ 0.93
SEMA4B-202ENST00000411539 RNF123Q5XPI4 1314 aa20.86■□□□□ 0.93
SEMA4B-202ENST00000411539 BCAR3O75815 825 aa20.86■□□□□ 0.93
SEMA4B-202ENST00000411539 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
SEMA4B-202ENST00000411539 RPRD2Q5VT52 1461 aaKnown RBP20.85■□□□□ 0.93
SEMA4B-202ENST00000411539 FOXD4L1Q9NU39 408 aa20.85■□□□□ 0.93
SEMA4B-202ENST00000411539 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
SEMA4B-202ENST00000411539 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
SEMA4B-202ENST00000411539 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
SEMA4B-202ENST00000411539 ARID3AQ99856 593 aa20.84■□□□□ 0.93
SEMA4B-202ENST00000411539 NESP48681 1621 aa20.84■□□□□ 0.93
SEMA4B-202ENST00000411539 EHBP1L1Q8N3D4 1523 aa20.83■□□□□ 0.93
SEMA4B-202ENST00000411539 UBE2Q2Q8WVN8 375 aa20.83■□□□□ 0.93
SEMA4B-202ENST00000411539 E9PSI1 815 aa20.82■□□□□ 0.92
SEMA4B-202ENST00000411539 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
SEMA4B-202ENST00000411539 MORC1Q86VD1 984 aa20.81■□□□□ 0.92
SEMA4B-202ENST00000411539 CCDC144AA2RUR9 1427 aa20.81■□□□□ 0.92
SEMA4B-202ENST00000411539 MSNP26038 577 aaKnown RBP20.81■□□□□ 0.92
SEMA4B-202ENST00000411539 KIAA1107Q9UPP5 1409 aa20.81■□□□□ 0.92
SEMA4B-202ENST00000411539 SUPT6HQ7KZ85 1726 aaKnown RBP20.8■□□□□ 0.92
SEMA4B-202ENST00000411539 DHX29Q7Z478 1369 aaKnown RBP20.8■□□□□ 0.92
SEMA4B-202ENST00000411539 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
SEMA4B-202ENST00000411539 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
SEMA4B-202ENST00000411539 GBP4Q96PP9 640 aa20.78■□□□□ 0.92
SEMA4B-202ENST00000411539 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
SEMA4B-202ENST00000411539 DAPK1P53355 1430 aa20.78■□□□□ 0.92
SEMA4B-202ENST00000411539 ITPRIPQ8IWB1 547 aa20.77■□□□□ 0.92
SEMA4B-202ENST00000411539 PTMAP06454 111 aaKnown RBP20.76■□□□□ 0.91
SEMA4B-202ENST00000411539 PPP2R1AP30153 589 aa20.76■□□□□ 0.91
SEMA4B-202ENST00000411539 TPRNQ4KMQ1 711 aa20.76■□□□□ 0.91
SEMA4B-202ENST00000411539 ZBTB7CA1YPR0 619 aa20.75■□□□□ 0.91
SEMA4B-202ENST00000411539 DNTTIP2Q5QJE6 756 aaKnown RBP20.75■□□□□ 0.91
SEMA4B-202ENST00000411539 CHMP5Q9NZZ3 219 aa20.74■□□□□ 0.91
SEMA4B-202ENST00000411539 PKNOX2Q96KN3 472 aa20.74■□□□□ 0.91
SEMA4B-202ENST00000411539 U2AF1L5P0DN76 240 aaPredicted RBP20.73■□□□□ 0.91
SEMA4B-202ENST00000411539 U2AF1Q01081 240 aaKnown RBP eCLIP20.73■□□□□ 0.91
SEMA4B-202ENST00000411539 TRAK2O60296 914 aa20.73■□□□□ 0.91
SEMA4B-202ENST00000411539 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
SEMA4B-202ENST00000411539 SMC4Q9NTJ3 1288 aa20.71■□□□□ 0.91
SEMA4B-202ENST00000411539 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
SEMA4B-202ENST00000411539 C8orf34Q49A92 452 aa20.71■□□□□ 0.91
SEMA4B-202ENST00000411539 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
SEMA4B-202ENST00000411539 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
SEMA4B-202ENST00000411539 ABCC5O15440 1437 aa20.69■□□□□ 0.9
SEMA4B-202ENST00000411539 DUSP27Q5VZP5 1158 aa20.68■□□□□ 0.9
SEMA4B-202ENST00000411539 ROCK1Q13464 1354 aa20.68■□□□□ 0.9
SEMA4B-202ENST00000411539 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
SEMA4B-202ENST00000411539 MRE11P49959 708 aa20.67■□□□□ 0.9
SEMA4B-202ENST00000411539 PDZRN3Q9UPQ7 1066 aa20.67■□□□□ 0.9
SEMA4B-202ENST00000411539 EPRSP07814 1512 aaKnown RBP20.66■□□□□ 0.9
SEMA4B-202ENST00000411539 CFAP43Q8NDM7 1665 aa20.66■□□□□ 0.9
SEMA4B-202ENST00000411539 SLC24A1O60721 1099 aa20.66■□□□□ 0.9
SEMA4B-202ENST00000411539 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
SEMA4B-202ENST00000411539 MCM4P33991 863 aa20.65■□□□□ 0.9
SEMA4B-202ENST00000411539 SLFN5Q08AF3 891 aa20.65■□□□□ 0.9
SEMA4B-202ENST00000411539 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
SEMA4B-202ENST00000411539 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
SEMA4B-202ENST00000411539 IGHDP01880 384 aa20.63■□□□□ 0.89
SEMA4B-202ENST00000411539 PDE3AQ14432 1141 aa20.62■□□□□ 0.89
SEMA4B-202ENST00000411539 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
SEMA4B-202ENST00000411539 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
SEMA4B-202ENST00000411539 LRPPRCP42704 1394 aaKnown RBP20.61■□□□□ 0.89
SEMA4B-202ENST00000411539 SAFB2Q14151 953 aaKnown RBP eCLIP20.61■□□□□ 0.893e-6■■□□□ 13.6
SEMA4B-202ENST00000411539 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
SEMA4B-202ENST00000411539 ZKSCAN2Q63HK3 967 aa20.6■□□□□ 0.89
SEMA4B-202ENST00000411539 PLCB2Q00722 1185 aa20.6■□□□□ 0.89
SEMA4B-202ENST00000411539 CALD1Q05682 793 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-202ENST00000411539 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
SEMA4B-202ENST00000411539 SPATA31E1Q6ZUB1 1445 aa20.59■□□□□ 0.89
SEMA4B-202ENST00000411539 CARMIL2Q6F5E8 1435 aa20.58■□□□□ 0.89
SEMA4B-202ENST00000411539 APBB1O00213 710 aa20.58■□□□□ 0.89
SEMA4B-202ENST00000411539 PANK2Q9BZ23 570 aa20.58■□□□□ 0.89
SEMA4B-202ENST00000411539 SEC24BO95487 1268 aa20.58■□□□□ 0.88
SEMA4B-202ENST00000411539 ESPNB1AK53 854 aa20.57■□□□□ 0.88
SEMA4B-202ENST00000411539 FAM13BQ9NYF5 915 aa20.57■□□□□ 0.88
SEMA4B-202ENST00000411539 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
SEMA4B-202ENST00000411539 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
SEMA4B-202ENST00000411539 DZIP1LQ8IYY4 767 aaKnown RBP20.57■□□□□ 0.88
SEMA4B-202ENST00000411539 GRPEL1Q9HAV7 217 aa20.57■□□□□ 0.88
SEMA4B-202ENST00000411539 IPO8O15397 1037 aaKnown RBP20.56■□□□□ 0.88
SEMA4B-202ENST00000411539 LNPKQ9C0E8 428 aa20.56■□□□□ 0.88
SEMA4B-202ENST00000411539 UGGT2Q9NYU1 1516 aa20.56■□□□□ 0.88
SEMA4B-202ENST00000411539 RRAGDQ9NQL2 400 aaPredicted RBP20.56■□□□□ 0.88
SEMA4B-202ENST00000411539 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
SEMA4B-202ENST00000411539 XRCC6P12956 609 aaKnown RBP eCLIP20.55■□□□□ 0.888e-7■■■■■ 38
SEMA4B-202ENST00000411539 PTMSP20962 102 aa20.54■□□□□ 0.88
SEMA4B-202ENST00000411539 TCP11L2Q8N4U5 519 aa20.54■□□□□ 0.88
SEMA4B-202ENST00000411539 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
SEMA4B-202ENST00000411539 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms