RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 ZBED2Q9BTP6 218 aa5.7□□□□□ -1.5
RNU2-54P-201ENST00000410299 SPDYE16A6NNV3 312 aaPredicted RBP5.69□□□□□ -1.5
RNU2-54P-201ENST00000410299 COL9A1P20849 921 aa5.69□□□□□ -1.5
RNU2-54P-201ENST00000410299 ARIH1Q9Y4X5 557 aaPredicted RBP5.69□□□□□ -1.5
RNU2-54P-201ENST00000410299 NBR1Q14596 966 aa5.68□□□□□ -1.5
RNU2-54P-201ENST00000410299 C6orf132Q5T0Z8 1188 aa5.68□□□□□ -1.5
RNU2-54P-201ENST00000410299 EPAS1Q99814 870 aa5.68□□□□□ -1.5
RNU2-54P-201ENST00000410299 SLC4A5Q9BY07 1137 aa5.68□□□□□ -1.5
RNU2-54P-201ENST00000410299 GRXCR2A6NFK2 248 aa5.67□□□□□ -1.5
RNU2-54P-201ENST00000410299 PPP1R3GB7ZBB8 358 aa5.67□□□□□ -1.5
RNU2-54P-201ENST00000410299 PROX2Q3B8N5 592 aa5.67□□□□□ -1.5
RNU2-54P-201ENST00000410299 KCNV2Q8TDN2 545 aa5.67□□□□□ -1.5
RNU2-54P-201ENST00000410299 STAC3Q96MF2 364 aa5.67□□□□□ -1.5
RNU2-54P-201ENST00000410299 PRIM1P49642 420 aaKnown RBP5.66□□□□□ -1.5
RNU2-54P-201ENST00000410299 BHMG1C9JSJ3 638 aaPredicted RBP5.65□□□□□ -1.5
RNU2-54P-201ENST00000410299 MAP3K7O43318 606 aa5.65□□□□□ -1.5
RNU2-54P-201ENST00000410299 EN1Q05925 392 aaPredicted RBP5.65□□□□□ -1.5
RNU2-54P-201ENST00000410299 TSR1Q2NL82 804 aaKnown RBP5.65□□□□□ -1.5
RNU2-54P-201ENST00000410299 KCTD12Q96CX2 325 aaKnown RBP5.65□□□□□ -1.5
RNU2-54P-201ENST00000410299 HAP1P54257 671 aaPredicted RBP5.64□□□□□ -1.51
RNU2-54P-201ENST00000410299 ARHGEF1Q92888 912 aaKnown RBP5.64□□□□□ -1.51
RNU2-54P-201ENST00000410299 OSBPP22059 807 aa5.63□□□□□ -1.51
RNU2-54P-201ENST00000410299 MRPL50Q8N5N7 158 aaKnown RBP5.63□□□□□ -1.51
RNU2-54P-201ENST00000410299 MLLT3P42568 568 aaPredicted RBP5.62□□□□□ -1.51
RNU2-54P-201ENST00000410299 KIAA1468Q9P260 1216 aa5.62□□□□□ -1.51
RNU2-54P-201ENST00000410299 RABGEF1Q9UJ41 708 aa5.62□□□□□ -1.51
RNU2-54P-201ENST00000410299 GOLGA8CPA6NN73 597 aa5.61□□□□□ -1.51
RNU2-54P-201ENST00000410299 IRX2Q9BZI1 471 aaPredicted RBP5.61□□□□□ -1.51
RNU2-54P-201ENST00000410299 NBPF3Q9H094 633 aa5.61□□□□□ -1.51
RNU2-54P-201ENST00000410299 TRIM6-TRIM34B2RNG4 842 aa5.6□□□□□ -1.51
RNU2-54P-201ENST00000410299 PTPN5P54829 565 aa5.6□□□□□ -1.51
RNU2-54P-201ENST00000410299 WNT2BQ93097 391 aa5.6□□□□□ -1.51
RNU2-54P-201ENST00000410299 CDHR5Q9HBB8 845 aa5.6□□□□□ -1.51
RNU2-54P-201ENST00000410299 SEPT9Q9UHD8 586 aaPredicted RBP5.6□□□□□ -1.51
RNU2-54P-201ENST00000410299 KDM2AQ9Y2K7 1162 aa5.6□□□□□ -1.51
RNU2-54P-201ENST00000410299 P3H3Q8IVL6 736 aa5.59□□□□□ -1.51
RNU2-54P-201ENST00000410299 TSKSQ9UJT2 592 aa5.59□□□□□ -1.51
RNU2-54P-201ENST00000410299 ONECUT3O60422 494 aaPredicted RBP5.58□□□□□ -1.52
RNU2-54P-201ENST00000410299 THSD4Q6ZMP0 1018 aa5.58□□□□□ -1.52
RNU2-54P-201ENST00000410299 CDCA7LQ96GN5 454 aa5.58□□□□□ -1.52
RNU2-54P-201ENST00000410299 SEMA3EO15041 775 aa5.57□□□□□ -1.52
RNU2-54P-201ENST00000410299 PRSS12P56730 875 aa5.57□□□□□ -1.52
RNU2-54P-201ENST00000410299 FAM198AQ9UFP1 575 aa5.57□□□□□ -1.52
RNU2-54P-201ENST00000410299 C3orf80F5H4A9 247 aa5.56□□□□□ -1.52
RNU2-54P-201ENST00000410299 SMAPO00193 183 aa5.56□□□□□ -1.52
RNU2-54P-201ENST00000410299 LAPTM4BQ86VI4 370 aa5.56□□□□□ -1.52
RNU2-54P-201ENST00000410299 PACS2Q86VP3 889 aa5.56□□□□□ -1.52
RNU2-54P-201ENST00000410299 CERKQ8TCT0 537 aa5.56□□□□□ -1.52
RNU2-54P-201ENST00000410299 ZFRQ96KR1 1074 aaKnown RBP5.56□□□□□ -1.52
RNU2-54P-201ENST00000410299 NPDC1Q9NQX5 325 aaPredicted RBP5.56□□□□□ -1.52
RNU2-54P-201ENST00000410299 RGS20O76081 388 aa5.55□□□□□ -1.52
RNU2-54P-201ENST00000410299 BCAMP50895 628 aa5.55□□□□□ -1.52
RNU2-54P-201ENST00000410299 FAM98CQ17RN3 349 aaKnown RBP5.55□□□□□ -1.52
RNU2-54P-201ENST00000410299 ANKK1Q8NFD2 765 aa5.55□□□□□ -1.52
RNU2-54P-201ENST00000410299 NUTM2FA1L443 756 aa5.53□□□□□ -1.52
RNU2-54P-201ENST00000410299 SOWAHBA6NEL2 793 aa5.53□□□□□ -1.52
RNU2-54P-201ENST00000410299 PADI6Q6TGC4 694 aa5.53□□□□□ -1.52
RNU2-54P-201ENST00000410299 TATDN2Q93075 761 aa5.53□□□□□ -1.52
RNU2-54P-201ENST00000410299 NUDT18Q6ZVK8 323 aa5.52□□□□□ -1.53
RNU2-54P-201ENST00000410299 TTC13Q8NBP0 860 aa5.52□□□□□ -1.53
RNU2-54P-201ENST00000410299 PNMA3Q9UL41 463 aa5.52□□□□□ -1.53
RNU2-54P-201ENST00000410299 TESPA1A2RU30 521 aaPredicted RBP5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 NBPF26B4DH59 902 aa5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 PTGDRQ13258 359 aa5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 VSIG10Q8N0Z9 540 aa5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 LRCH3Q96II8 777 aa5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 WBP1LQ9NX94 342 aa5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 RBM27Q9P2N5 1060 aaKnown RBP5.51□□□□□ -1.53
RNU2-54P-201ENST00000410299 SAMD7Q7Z3H4 446 aa5.5□□□□□ -1.53
RNU2-54P-201ENST00000410299 HPS5Q9UPZ3 1129 aa5.5□□□□□ -1.53
RNU2-54P-201ENST00000410299 RBM26Q5T8P6 1007 aaKnown RBP5.49□□□□□ -1.53
RNU2-54P-201ENST00000410299 FAM161AQ3B820 660 aa5.48□□□□□ -1.53
RNU2-54P-201ENST00000410299 Q6ZNB5 142 aa5.48□□□□□ -1.53
RNU2-54P-201ENST00000410299 TSR3Q9UJK0 312 aaKnown RBP5.48□□□□□ -1.53
RNU2-54P-201ENST00000410299 SMYD5Q6GMV2 418 aa5.47□□□□□ -1.53
RNU2-54P-201ENST00000410299 EYA1Q99502 592 aa5.47□□□□□ -1.53
RNU2-54P-201ENST00000410299 RNF40O75150 1001 aa5.46□□□□□ -1.54
RNU2-54P-201ENST00000410299 FCHSD2O94868 740 aa5.46□□□□□ -1.54
RNU2-54P-201ENST00000410299 PPP4CP60510 307 aa5.46□□□□□ -1.54
RNU2-54P-201ENST00000410299 ADGRG1Q9Y653 693 aa5.46□□□□□ -1.54
RNU2-54P-201ENST00000410299 A0A0G2JS52 829 aa5.45□□□□□ -1.54
RNU2-54P-201ENST00000410299 HDGFP51858 240 aaKnown RBP5.45□□□□□ -1.54
RNU2-54P-201ENST00000410299 SWT1Q5T5J6 900 aaKnown RBP5.45□□□□□ -1.54
RNU2-54P-201ENST00000410299 IFFO2Q5TF58 517 aa5.45□□□□□ -1.54
RNU2-54P-201ENST00000410299 NYAP1Q6ZVC0 841 aa5.45□□□□□ -1.54
RNU2-54P-201ENST00000410299 FECHP22830 423 aa5.44□□□□□ -1.54
RNU2-54P-201ENST00000410299 GPR37O15354 613 aa5.43□□□□□ -1.54
RNU2-54P-201ENST00000410299 ITGBL1O95965 494 aaPredicted RBP5.43□□□□□ -1.54
RNU2-54P-201ENST00000410299 HIC1Q14526 733 aa5.43□□□□□ -1.54
RNU2-54P-201ENST00000410299 RBM46Q8TBY0 533 aaKnown RBP5.43□□□□□ -1.54
RNU2-54P-201ENST00000410299 RCCD1A6NED2 376 aa5.42□□□□□ -1.54
RNU2-54P-201ENST00000410299 APLP1P51693 650 aa5.42□□□□□ -1.54
RNU2-54P-201ENST00000410299 GNPATO15228 680 aa5.41□□□□□ -1.54
RNU2-54P-201ENST00000410299 DNAJB2P25686 324 aa5.41□□□□□ -1.54
RNU2-54P-201ENST00000410299 KCNC4Q03721 635 aa5.41□□□□□ -1.54
RNU2-54P-201ENST00000410299 GPIHBP1Q8IV16 184 aa5.41□□□□□ -1.54
RNU2-54P-201ENST00000410299 SLF2Q8IX21 1173 aa5.41□□□□□ -1.54
RNU2-54P-201ENST00000410299 TJAP1Q5JTD0 557 aa5.4□□□□□ -1.54
RNU2-54P-201ENST00000410299 PXYLP1Q8TE99 480 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms