RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 ZNF518AQ6AHZ1 1483 aa27.77■■■□□ 2.04
LIMS2-207ENST00000409808 KIDINS220Q9ULH0 1771 aa27.76■■■□□ 2.03
LIMS2-207ENST00000409808 GLI2P10070 1586 aa27.75■■■□□ 2.03
LIMS2-207ENST00000409808 POGZQ7Z3K3 1410 aa27.74■■■□□ 2.03
LIMS2-207ENST00000409808 DIP2BQ9P265 1576 aa27.74■■■□□ 2.03
LIMS2-207ENST00000409808 RAPGEF3O95398 923 aa27.73■■■□□ 2.03
LIMS2-207ENST00000409808 NEO1Q92859 1461 aa27.73■■■□□ 2.03
LIMS2-207ENST00000409808 IQGAP3Q86VI3 1631 aa27.72■■■□□ 2.03
LIMS2-207ENST00000409808 ANP32CO43423 234 aa27.71■■■□□ 2.03
LIMS2-207ENST00000409808 MAGI2Q86UL8 1455 aa27.71■■■□□ 2.03
LIMS2-207ENST00000409808 TSPOAP1O95153 1857 aa27.7■■■□□ 2.02
LIMS2-207ENST00000409808 TEX14Q8IWB6 1497 aa27.69■■■□□ 2.02
LIMS2-207ENST00000409808 KDM5CP41229 1560 aa27.69■■■□□ 2.02
LIMS2-207ENST00000409808 HIRIP3Q9BW71 556 aaPredicted RBP27.68■■■□□ 2.02
LIMS2-207ENST00000409808 DHX29Q7Z478 1369 aaKnown RBP27.67■■■□□ 2.02
LIMS2-207ENST00000409808 KIF3BO15066 747 aa27.67■■■□□ 2.02
LIMS2-207ENST00000409808 HECW2Q9P2P5 1572 aa27.63■■■□□ 2.01
LIMS2-207ENST00000409808 MLH3Q9UHC1 1453 aa27.62■■■□□ 2.01
LIMS2-207ENST00000409808 NBPF8Q3BBV2 869 aa27.61■■■□□ 2.01
LIMS2-207ENST00000409808 DEPDC5O75140 1603 aa27.61■■■□□ 2.01
LIMS2-207ENST00000409808 PLA2R1Q13018 1463 aa27.6■■■□□ 2.01
LIMS2-207ENST00000409808 PPRC1Q5VV67 1664 aaKnown RBP27.59■■■□□ 2.01
LIMS2-207ENST00000409808 RICTORQ6R327 1708 aa27.59■■■□□ 2.01
LIMS2-207ENST00000409808 A2MP01023 1474 aa27.59■■■□□ 2.01
LIMS2-207ENST00000409808 ABCA6Q8N139 1617 aa27.58■■■□□ 2.01
LIMS2-207ENST00000409808 EIF2AK4Q9P2K8 1649 aaKnown RBP27.57■■■□□ 2
LIMS2-207ENST00000409808 KIF13AQ9H1H9 1805 aa27.55■■■□□ 2
LIMS2-207ENST00000409808 FRMPD1Q5SYB0 1578 aa27.55■■■□□ 2
LIMS2-207ENST00000409808 MROH1Q8NDA8 1641 aa27.55■■■□□ 2
LIMS2-207ENST00000409808 E9PCH4 1651 aa27.54■■■□□ 2
LIMS2-207ENST00000409808 CCDC144AA2RUR9 1427 aa27.53■■■□□ 2
LIMS2-207ENST00000409808 ZNF326Q5BKZ1 582 aaKnown RBP27.51■■□□□ 1.99
LIMS2-207ENST00000409808 KANK1Q14678 1352 aa27.51■■□□□ 1.99
LIMS2-207ENST00000409808 VWDEQ8N2E2 1590 aa27.5■■□□□ 1.99
LIMS2-207ENST00000409808 PRDM15P57071 1507 aaPredicted RBP27.5■■□□□ 1.99
LIMS2-207ENST00000409808 YEATS2Q9ULM3 1422 aa27.49■■□□□ 1.99
LIMS2-207ENST00000409808 DIP2CQ9Y2E4 1556 aa27.48■■□□□ 1.99
LIMS2-207ENST00000409808 KDM2AQ9Y2K7 1162 aa27.47■■□□□ 1.99
LIMS2-207ENST00000409808 TSHZ2Q9NRE2 1034 aa27.47■■□□□ 1.99
LIMS2-207ENST00000409808 TET3O43151 1660 aa27.47■■□□□ 1.99
LIMS2-207ENST00000409808 RGL3Q3MIN7 710 aa27.46■■□□□ 1.99
LIMS2-207ENST00000409808 GGT6Q6P531 493 aa27.46■■□□□ 1.99
LIMS2-207ENST00000409808 NEFLP07196 543 aa27.45■■□□□ 1.99
LIMS2-207ENST00000409808 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.98
LIMS2-207ENST00000409808 ATP10AO60312 1499 aa27.44■■□□□ 1.98
LIMS2-207ENST00000409808 HSPA5P11021 654 aaKnown RBP27.44■■□□□ 1.98
LIMS2-207ENST00000409808 FKBP8Q14318 412 aa27.44■■□□□ 1.98
LIMS2-207ENST00000409808 RNF17Q9BXT8 1623 aaKnown RBP27.43■■□□□ 1.98
LIMS2-207ENST00000409808 CEP152O94986 1710 aa27.42■■□□□ 1.98
LIMS2-207ENST00000409808 SPHKAPQ2M3C7 1700 aa27.4■■□□□ 1.98
LIMS2-207ENST00000409808 EIF4G2P78344 907 aaKnown RBP eCLIP27.38■■□□□ 1.97
LIMS2-207ENST00000409808 ZMYM4Q5VZL5 1548 aa27.36■■□□□ 1.97
LIMS2-207ENST00000409808 BCORL1Q5H9F3 1711 aa27.36■■□□□ 1.97
LIMS2-207ENST00000409808 PTPRTO14522 1441 aa27.36■■□□□ 1.97
LIMS2-207ENST00000409808 COL17A1Q9UMD9 1497 aaPredicted RBP27.36■■□□□ 1.97
LIMS2-207ENST00000409808 TRPM2O94759 1503 aa27.35■■□□□ 1.97
LIMS2-207ENST00000409808 UHRF1BP1Q6BDS2 1440 aa27.35■■□□□ 1.97
LIMS2-207ENST00000409808 EFCAB6Q5THR3 1501 aa27.34■■□□□ 1.97
LIMS2-207ENST00000409808 CFAP65Q6ZU64 1925 aaKnown RBP27.33■■□□□ 1.97
LIMS2-207ENST00000409808 CLTCL1P53675 1640 aa27.33■■□□□ 1.97
LIMS2-207ENST00000409808 LMTK2Q8IWU2 1503 aa27.32■■□□□ 1.96
LIMS2-207ENST00000409808 WASHC2CQ9Y4E1 1318 aa27.31■■□□□ 1.96
LIMS2-207ENST00000409808 WASHC2AQ641Q2 1341 aa27.3■■□□□ 1.96
LIMS2-207ENST00000409808 UGGT1Q9NYU2 1555 aa27.29■■□□□ 1.96
LIMS2-207ENST00000409808 SPATA31E1Q6ZUB1 1445 aa27.28■■□□□ 1.96
LIMS2-207ENST00000409808 ABCC3O15438 1527 aa27.28■■□□□ 1.96
LIMS2-207ENST00000409808 RALGAPBQ86X10 1494 aa27.26■■□□□ 1.95
LIMS2-207ENST00000409808 BCANQ96GW7 911 aa27.25■■□□□ 1.95
LIMS2-207ENST00000409808 NPATQ14207 1427 aa27.25■■□□□ 1.95
LIMS2-207ENST00000409808 PRAG1Q86YV5 1406 aa27.25■■□□□ 1.95
LIMS2-207ENST00000409808 C11orf95C9JLR9 678 aaPredicted RBP27.23■■□□□ 1.95
LIMS2-207ENST00000409808 CNTLNQ9NXG0 1405 aa27.23■■□□□ 1.95
LIMS2-207ENST00000409808 CARD11Q9BXL7 1154 aa27.22■■□□□ 1.95
LIMS2-207ENST00000409808 CAMSAP1Q5T5Y3 1602 aa27.21■■□□□ 1.95
LIMS2-207ENST00000409808 USP47Q96K76 1375 aa27.21■■□□□ 1.95
LIMS2-207ENST00000409808 SIGLEC1Q9BZZ2 1709 aa27.19■■□□□ 1.94
LIMS2-207ENST00000409808 TRPM1Q7Z4N2 1603 aa27.19■■□□□ 1.94
LIMS2-207ENST00000409808 NBPF1Q3BBV0 1214 aa27.18■■□□□ 1.94
LIMS2-207ENST00000409808 ROCK2O75116 1388 aaKnown RBP27.17■■□□□ 1.94
LIMS2-207ENST00000409808 CCDC7Q96M83 1385 aa27.16■■□□□ 1.94
LIMS2-207ENST00000409808 HNRNPUQ00839 825 aaKnown RBP eCLIP27.16■■□□□ 1.94
LIMS2-207ENST00000409808 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
LIMS2-207ENST00000409808 KIF1BO60333 1816 aa27.14■■□□□ 1.94
LIMS2-207ENST00000409808 MROH2AA6NES4 1674 aa27.12■■□□□ 1.93
LIMS2-207ENST00000409808 REREQ9P2R6 1566 aa27.12■■□□□ 1.93
LIMS2-207ENST00000409808 CHGAP10645 457 aaKnown RBP27.11■■□□□ 1.93
LIMS2-207ENST00000409808 MLECQ14165 292 aa27.11■■□□□ 1.93
LIMS2-207ENST00000409808 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
LIMS2-207ENST00000409808 ARHGEF40Q8TER5 1519 aa27.11■■□□□ 1.93
LIMS2-207ENST00000409808 ERICH6BQ5W0A0 696 aa27.11■■□□□ 1.93
LIMS2-207ENST00000409808 AGLP35573 1532 aa27.08■■□□□ 1.93
LIMS2-207ENST00000409808 MADDQ8WXG6 1647 aa27.08■■□□□ 1.93
LIMS2-207ENST00000409808 KIF7Q2M1P5 1343 aa27.08■■□□□ 1.92
LIMS2-207ENST00000409808 ST20-MTHFSA0A0A6YYL1 179 aa27.07■■□□□ 1.92
LIMS2-207ENST00000409808 NOS1P29475 1434 aa27.07■■□□□ 1.92
LIMS2-207ENST00000409808 PRKRIP1Q9H875 184 aaPredicted RBP27.06■■□□□ 1.92
LIMS2-207ENST00000409808 SYNMO15061 1565 aa27.06■■□□□ 1.92
LIMS2-207ENST00000409808 ARHGAP31Q2M1Z3 1444 aa27.06■■□□□ 1.92
LIMS2-207ENST00000409808 NEURL4Q96JN8 1562 aa27.04■■□□□ 1.92
LIMS2-207ENST00000409808 POLR1AO95602 1720 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms