RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CLSTN1O94985 981 aa6.4□□□□□ -1.39
SCN3A-203ENST00000409101 NUTM2BA6NNL0 878 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-203ENST00000409101 NUTM2EB1AL46 878 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-203ENST00000409101 RALBP1Q15311 655 aa6.39□□□□□ -1.39
SCN3A-203ENST00000409101 NUTM2AQ8IVF1 878 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-203ENST00000409101 DHX57Q6P158 1386 aaKnown RBP6.39□□□□□ -1.39
SCN3A-203ENST00000409101 FRAT2O75474 233 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-203ENST00000409101 ANKLE2Q86XL3 938 aa6.39□□□□□ -1.39
SCN3A-203ENST00000409101 LAMC3Q9Y6N6 1575 aa6.39□□□□□ -1.39
SCN3A-203ENST00000409101 GPRASP1Q5JY77 1395 aa6.39□□□□□ -1.39
SCN3A-203ENST00000409101 MIER1Q8N108 512 aa6.39□□□□□ -1.39
SCN3A-203ENST00000409101 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-203ENST00000409101 DNMBPQ6XZF7 1577 aa6.38□□□□□ -1.39
SCN3A-203ENST00000409101 ESCO1Q5FWF5 840 aa6.38□□□□□ -1.39
SCN3A-203ENST00000409101 KIF15Q9NS87 1388 aa6.38□□□□□ -1.39
SCN3A-203ENST00000409101 PLEKHH2Q8IVE3 1493 aa6.38□□□□□ -1.39
SCN3A-203ENST00000409101 CGNL1Q0VF96 1302 aa6.37□□□□□ -1.39
SCN3A-203ENST00000409101 MCCP23508 829 aa6.37□□□□□ -1.39
SCN3A-203ENST00000409101 GOLGA6L22H0YM25 854 aa6.37□□□□□ -1.39
SCN3A-203ENST00000409101 GPATCH3Q96I76 525 aa6.37□□□□□ -1.39
SCN3A-203ENST00000409101 RUSC2Q8N2Y8 1516 aa6.37□□□□□ -1.39
SCN3A-203ENST00000409101 AFAP1Q8N556 730 aa6.37□□□□□ -1.39
SCN3A-203ENST00000409101 TEFQ10587 303 aa6.36□□□□□ -1.39
SCN3A-203ENST00000409101 L3MBTL2Q969R5 705 aa6.36□□□□□ -1.39
SCN3A-203ENST00000409101 DDRGK1Q96HY6 314 aa6.36□□□□□ -1.39
SCN3A-203ENST00000409101 WASHC2AQ641Q2 1341 aa6.36□□□□□ -1.39
SCN3A-203ENST00000409101 POLA1P09884 1462 aaPredicted RBP6.36□□□□□ -1.39
SCN3A-203ENST00000409101 TPRNQ4KMQ1 711 aa6.36□□□□□ -1.39
SCN3A-203ENST00000409101 RAPGEF4Q8WZA2 1011 aa6.36□□□□□ -1.39
SCN3A-203ENST00000409101 APBB1O00213 710 aa6.36□□□□□ -1.39
SCN3A-203ENST00000409101 NLRP2Q9NX02 1062 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 SYNJ1O43426 1573 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 ITPRIPQ8IWB1 547 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 CFAP44Q96MT7 982 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 TRIM34Q9BYJ4 488 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 GNL2Q13823 731 aaKnown RBP6.35□□□□□ -1.39
SCN3A-203ENST00000409101 DMRT2Q9Y5R5 561 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 SLC4A10Q6U841 1118 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 FBXW7Q969H0 707 aa6.35□□□□□ -1.39
SCN3A-203ENST00000409101 RAPGEF3O95398 923 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 KIAA1211Q6ZU35 1233 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 FYCO1Q9BQS8 1478 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 MIA2Q96PC5 1412 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 NUTM2GQ5VZR2 741 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 SCAPERQ9BY12 1400 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 NOL10Q9BSC4 688 aaKnown RBP6.34□□□□□ -1.39
SCN3A-203ENST00000409101 ZNF644Q9H582 1327 aaPredicted RBP6.34□□□□□ -1.39
SCN3A-203ENST00000409101 CASKIN1Q8WXD9 1431 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 STRN4Q9NRL3 753 aa6.34□□□□□ -1.39
SCN3A-203ENST00000409101 RGS3P49796 1198 aa6.33□□□□□ -1.4
SCN3A-203ENST00000409101 NGEFQ8N5V2 710 aa6.33□□□□□ -1.4
SCN3A-203ENST00000409101 STAC3Q96MF2 364 aa6.33□□□□□ -1.4
SCN3A-203ENST00000409101 HMMRO75330 724 aa6.33□□□□□ -1.4
SCN3A-203ENST00000409101 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
SCN3A-203ENST00000409101 PPP1R1BQ9UD71 204 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-203ENST00000409101 CCDC146Q8IYE0 955 aa6.33□□□□□ -1.4
SCN3A-203ENST00000409101 CENPJQ9HC77 1338 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-203ENST00000409101 CWC22Q9HCG8 908 aaKnown RBP6.33□□□□□ -1.4
SCN3A-203ENST00000409101 SMC4Q9NTJ3 1288 aa6.33□□□□□ -1.4
SCN3A-203ENST00000409101 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
SCN3A-203ENST00000409101 HECW1Q76N89 1606 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 NEXNQ0ZGT2 675 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 USP35Q9P2H5 1018 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 ABTB2Q8N961 1025 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 SMG6Q86US8 1419 aaKnown RBP6.32□□□□□ -1.4
SCN3A-203ENST00000409101 NLRP6P59044 892 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 PANK3Q9H999 370 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 RRBP1Q9P2E9 1410 aaKnown RBP6.32□□□□□ -1.4
SCN3A-203ENST00000409101 ANKRD50Q9ULJ7 1429 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 MAGI1Q96QZ7 1491 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-203ENST00000409101 HSP90AB1P08238 724 aaKnown RBP6.32□□□□□ -1.4
SCN3A-203ENST00000409101 AMOTL1Q8IY63 956 aa6.32□□□□□ -1.4
SCN3A-203ENST00000409101 NCOA2Q15596 1464 aa6.31□□□□□ -1.4
SCN3A-203ENST00000409101 RBM33Q96EV2 1170 aaKnown RBP6.31□□□□□ -1.4
SCN3A-203ENST00000409101 EFCAB5A4FU69 1503 aa6.31□□□□□ -1.4
SCN3A-203ENST00000409101 EIF2S2P20042 333 aaKnown RBP6.31□□□□□ -1.4
SCN3A-203ENST00000409101 FGD6Q6ZV73 1430 aa6.31□□□□□ -1.4
SCN3A-203ENST00000409101 KIAA0586Q9BVV6 1533 aa6.31□□□□□ -1.4
SCN3A-203ENST00000409101 DIAPH1O60610 1272 aaKnown RBP6.31□□□□□ -1.4
SCN3A-203ENST00000409101 ST20-MTHFSA0A0A6YYL1 179 aa6.31□□□□□ -1.4
SCN3A-203ENST00000409101 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
SCN3A-203ENST00000409101 KIF21BO75037 1637 aa6.31□□□□□ -1.4
SCN3A-203ENST00000409101 VPS37DQ86XT2 251 aa6.3□□□□□ -1.4
SCN3A-203ENST00000409101 PHLDB1Q86UU1 1377 aa6.3□□□□□ -1.4
SCN3A-203ENST00000409101 CABP2Q9NPB3 220 aa6.3□□□□□ -1.4
SCN3A-203ENST00000409101 DDX58O95786 925 aaKnown RBP6.3□□□□□ -1.4
SCN3A-203ENST00000409101 HMGB2P26583 209 aaKnown RBP6.3□□□□□ -1.4
SCN3A-203ENST00000409101 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
SCN3A-203ENST00000409101 PDE3BQ13370 1112 aa6.3□□□□□ -1.4
SCN3A-203ENST00000409101 AKNAQ7Z591 1439 aa6.3□□□□□ -1.4
SCN3A-203ENST00000409101 GOLGA6L4A6NEF3 574 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 RWDD1Q9H446 243 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-203ENST00000409101 TMEM132EQ6IEE7 984 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 SLC52A1Q9NWF4 448 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 GOLGA6L6A8MZA4 724 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 VPS53Q5VIR6 699 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 TOM1L2Q6ZVM7 507 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 EHBP1L1Q8N3D4 1523 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 TOP2BQ02880 1626 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 CCER2I3L3R5 266 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms