RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 SLC26A8Q96RN1 970 aa12.99□□□□□ -0.33
KDM3A-202ENST00000409064 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
KDM3A-202ENST00000409064 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
KDM3A-202ENST00000409064 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
KDM3A-202ENST00000409064 KTN1Q86UP2 1357 aaKnown RBP12.99□□□□□ -0.33
KDM3A-202ENST00000409064 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
KDM3A-202ENST00000409064 USP35Q9P2H5 1018 aa12.98□□□□□ -0.33
KDM3A-202ENST00000409064 NUTM2GQ5VZR2 741 aa12.98□□□□□ -0.33
KDM3A-202ENST00000409064 NUTM2BA6NNL0 878 aaPredicted RBP12.97□□□□□ -0.33
KDM3A-202ENST00000409064 NUTM2EB1AL46 878 aaPredicted RBP12.97□□□□□ -0.33
KDM3A-202ENST00000409064 NUTM2AQ8IVF1 878 aaPredicted RBP12.97□□□□□ -0.33
KDM3A-202ENST00000409064 NBR1Q14596 966 aa12.96□□□□□ -0.33
KDM3A-202ENST00000409064 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
KDM3A-202ENST00000409064 B4GALNT3Q6L9W6 998 aa12.96□□□□□ -0.33
KDM3A-202ENST00000409064 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
KDM3A-202ENST00000409064 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
KDM3A-202ENST00000409064 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
KDM3A-202ENST00000409064 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
KDM3A-202ENST00000409064 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
KDM3A-202ENST00000409064 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
KDM3A-202ENST00000409064 CD109Q6YHK3 1445 aa12.94□□□□□ -0.34
KDM3A-202ENST00000409064 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
KDM3A-202ENST00000409064 STK31Q9BXU1 1019 aa12.94□□□□□ -0.34
KDM3A-202ENST00000409064 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
KDM3A-202ENST00000409064 G3V3G9 751 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 KIAA0586Q9BVV6 1533 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
KDM3A-202ENST00000409064 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 MS4A1P11836 297 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
KDM3A-202ENST00000409064 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
KDM3A-202ENST00000409064 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
KDM3A-202ENST00000409064 NLRP6P59044 892 aa12.92□□□□□ -0.34
KDM3A-202ENST00000409064 FYCO1Q9BQS8 1478 aa12.92□□□□□ -0.34
KDM3A-202ENST00000409064 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
KDM3A-202ENST00000409064 TEFQ10587 303 aa12.91□□□□□ -0.34
KDM3A-202ENST00000409064 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 APBB1O00213 710 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 PANK3Q9H999 370 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 NOP58Q9Y2X3 529 aaKnown RBP12.9□□□□□ -0.34
KDM3A-202ENST00000409064 KCNJ4P48050 445 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 CENPJQ9HC77 1338 aaPredicted RBP12.9□□□□□ -0.34
KDM3A-202ENST00000409064 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
KDM3A-202ENST00000409064 FGD1P98174 961 aa12.89□□□□□ -0.35
KDM3A-202ENST00000409064 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
KDM3A-202ENST00000409064 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
KDM3A-202ENST00000409064 CFAP70Q5T0N1 1121 aa12.89□□□□□ -0.35
KDM3A-202ENST00000409064 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
KDM3A-202ENST00000409064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.88□□□□□ -0.35
KDM3A-202ENST00000409064 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
KDM3A-202ENST00000409064 STRN4Q9NRL3 753 aa12.88□□□□□ -0.35
KDM3A-202ENST00000409064 RALBP1Q15311 655 aa12.88□□□□□ -0.35
KDM3A-202ENST00000409064 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
KDM3A-202ENST00000409064 NCOA2Q15596 1464 aa12.88□□□□□ -0.35
KDM3A-202ENST00000409064 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
KDM3A-202ENST00000409064 ABTB2Q8N961 1025 aa12.87□□□□□ -0.35
KDM3A-202ENST00000409064 GPRASP1Q5JY77 1395 aa12.87□□□□□ -0.35
KDM3A-202ENST00000409064 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
KDM3A-202ENST00000409064 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
KDM3A-202ENST00000409064 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
KDM3A-202ENST00000409064 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
KDM3A-202ENST00000409064 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
KDM3A-202ENST00000409064 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
KDM3A-202ENST00000409064 GORABQ5T7V8 394 aa12.86□□□□□ -0.35
KDM3A-202ENST00000409064 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
KDM3A-202ENST00000409064 RGS3P49796 1198 aa12.85□□□□□ -0.35
KDM3A-202ENST00000409064 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-202ENST00000409064 LMOD3Q0VAK6 560 aa12.85□□□□□ -0.35
KDM3A-202ENST00000409064 PRKRIP1Q9H875 184 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-202ENST00000409064 MAGI1Q96QZ7 1491 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-202ENST00000409064 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
KDM3A-202ENST00000409064 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
KDM3A-202ENST00000409064 PCF11O94913 1555 aaKnown RBP12.84□□□□□ -0.35
KDM3A-202ENST00000409064 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
KDM3A-202ENST00000409064 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
KDM3A-202ENST00000409064 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
KDM3A-202ENST00000409064 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
KDM3A-202ENST00000409064 HFM1A2PYH4 1435 aa12.84□□□□□ -0.35
KDM3A-202ENST00000409064 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.35
KDM3A-202ENST00000409064 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
KDM3A-202ENST00000409064 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
KDM3A-202ENST00000409064 PRAM1Q96QH2 718 aa12.83□□□□□ -0.36
KDM3A-202ENST00000409064 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
KDM3A-202ENST00000409064 NLRP13Q86W25 1043 aa12.82□□□□□ -0.36
KDM3A-202ENST00000409064 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
KDM3A-202ENST00000409064 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
KDM3A-202ENST00000409064 CNTLNQ9NXG0 1405 aa12.82□□□□□ -0.36
KDM3A-202ENST00000409064 DEKP35659 375 aaKnown RBP12.82□□□□□ -0.36
KDM3A-202ENST00000409064 XPCQ01831 940 aaPredicted RBP12.82□□□□□ -0.36
KDM3A-202ENST00000409064 PLB1Q6P1J6 1458 aa12.82□□□□□ -0.36
KDM3A-202ENST00000409064 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
KDM3A-202ENST00000409064 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
KDM3A-202ENST00000409064 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
KDM3A-202ENST00000409064 C9orf84Q5VXU9 1444 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms