RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
POLR1A-202ENST00000409024 SPAG9O60271 1321 aaKnown RBP14.25□□□□□ -0.13
POLR1A-202ENST00000409024 KDM5DQ9BY66 1539 aa14.25□□□□□ -0.13
POLR1A-202ENST00000409024 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
POLR1A-202ENST00000409024 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
POLR1A-202ENST00000409024 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
POLR1A-202ENST00000409024 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
POLR1A-202ENST00000409024 INO80Q9ULG1 1556 aaPredicted RBP14.2□□□□□ -0.14
POLR1A-202ENST00000409024 PZPP20742 1482 aa14.19□□□□□ -0.14
POLR1A-202ENST00000409024 MLH3Q9UHC1 1453 aa14.19□□□□□ -0.14
POLR1A-202ENST00000409024 CEBPAP49715 358 aaPredicted RBP14.19□□□□□ -0.14
POLR1A-202ENST00000409024 AFAP1Q8N556 730 aa14.19□□□□□ -0.14
POLR1A-202ENST00000409024 ATP7AQ04656 1500 aa14.19□□□□□ -0.14
POLR1A-202ENST00000409024 KDM5CP41229 1560 aa14.18□□□□□ -0.14
POLR1A-202ENST00000409024 UNC13BO14795 1591 aa14.17□□□□□ -0.14
POLR1A-202ENST00000409024 PTPRTO14522 1441 aa14.17□□□□□ -0.14
POLR1A-202ENST00000409024 NUP155O75694 1391 aa14.17□□□□□ -0.14
POLR1A-202ENST00000409024 ANKRD30BQ9BXX2 1392 aa14.17□□□□□ -0.14
POLR1A-202ENST00000409024 PREX1Q8TCU6 1659 aa14.17□□□□□ -0.14
POLR1A-202ENST00000409024 IQSEC2Q5JU85 1478 aa14.16□□□□□ -0.14
POLR1A-202ENST00000409024 MAGI2Q86UL8 1455 aa14.16□□□□□ -0.14
POLR1A-202ENST00000409024 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
POLR1A-202ENST00000409024 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
POLR1A-202ENST00000409024 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
POLR1A-202ENST00000409024 FER1L4A9Z1Z3 1794 aa14.15□□□□□ -0.14
POLR1A-202ENST00000409024 DHX29Q7Z478 1369 aaKnown RBP14.15□□□□□ -0.14
POLR1A-202ENST00000409024 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
POLR1A-202ENST00000409024 SIN3AQ96ST3 1273 aa14.14□□□□□ -0.15
POLR1A-202ENST00000409024 SETD1BQ9UPS6 1966 aaKnown RBP14.14□□□□□ -0.15
POLR1A-202ENST00000409024 ZMYM4Q5VZL5 1548 aa14.13□□□□□ -0.15
POLR1A-202ENST00000409024 IQGAP3Q86VI3 1631 aa14.12□□□□□ -0.15
POLR1A-202ENST00000409024 TONSLQ96HA7 1378 aa14.12□□□□□ -0.15
POLR1A-202ENST00000409024 FAM135AQ9P2D6 1515 aa14.12□□□□□ -0.15
POLR1A-202ENST00000409024 NEUROD1Q13562 356 aa14.12□□□□□ -0.15
POLR1A-202ENST00000409024 KIDINS220Q9ULH0 1771 aa14.11□□□□□ -0.15
POLR1A-202ENST00000409024 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
POLR1A-202ENST00000409024 PKD2Q13563 968 aa14.11□□□□□ -0.15
POLR1A-202ENST00000409024 SIGLEC1Q9BZZ2 1709 aa14.11□□□□□ -0.15
POLR1A-202ENST00000409024 LTBP4Q8N2S1 1624 aa14.11□□□□□ -0.15
POLR1A-202ENST00000409024 RPRD2Q5VT52 1461 aaKnown RBP14.11□□□□□ -0.15
POLR1A-202ENST00000409024 PPP1R15AO75807 674 aaPredicted RBP14.1□□□□□ -0.15
POLR1A-202ENST00000409024 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
POLR1A-202ENST00000409024 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
POLR1A-202ENST00000409024 ATP10AO60312 1499 aa14.09□□□□□ -0.15
POLR1A-202ENST00000409024 A2MP01023 1474 aa14.09□□□□□ -0.15
POLR1A-202ENST00000409024 KANK1Q14678 1352 aa14.09□□□□□ -0.15
POLR1A-202ENST00000409024 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
POLR1A-202ENST00000409024 VWDEQ8N2E2 1590 aa14.06□□□□□ -0.16
POLR1A-202ENST00000409024 PRDM15P57071 1507 aaPredicted RBP14.05□□□□□ -0.16
POLR1A-202ENST00000409024 RNF17Q9BXT8 1623 aaKnown RBP14.04□□□□□ -0.16
POLR1A-202ENST00000409024 KIF3BO15066 747 aa14.03□□□□□ -0.16
POLR1A-202ENST00000409024 FOXD1Q16676 465 aa14.03□□□□□ -0.16
POLR1A-202ENST00000409024 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
POLR1A-202ENST00000409024 LMTK2Q8IWU2 1503 aa14.03□□□□□ -0.16
POLR1A-202ENST00000409024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.172e-7■■■□□ 18.7
POLR1A-202ENST00000409024 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
POLR1A-202ENST00000409024 TET3O43151 1660 aa14.01□□□□□ -0.17
POLR1A-202ENST00000409024 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
POLR1A-202ENST00000409024 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
POLR1A-202ENST00000409024 L3MBTL2Q969R5 705 aa13.99□□□□□ -0.17
POLR1A-202ENST00000409024 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
POLR1A-202ENST00000409024 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
POLR1A-202ENST00000409024 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
POLR1A-202ENST00000409024 ZNF335Q9H4Z2 1342 aaPredicted RBP13.98□□□□□ -0.17
POLR1A-202ENST00000409024 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
POLR1A-202ENST00000409024 AGLP35573 1532 aa13.97□□□□□ -0.17
POLR1A-202ENST00000409024 HSPA1LP34931 641 aa13.97□□□□□ -0.17
POLR1A-202ENST00000409024 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
POLR1A-202ENST00000409024 PLA2R1Q13018 1463 aa13.96□□□□□ -0.17
POLR1A-202ENST00000409024 MED1Q15648 1581 aaPredicted RBP13.96□□□□□ -0.18
POLR1A-202ENST00000409024 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
POLR1A-202ENST00000409024 NCKAP5LQ9HCH0 1330 aa13.95□□□□□ -0.18
POLR1A-202ENST00000409024 NEURL4Q96JN8 1562 aa13.95□□□□□ -0.18
POLR1A-202ENST00000409024 TRPM2O94759 1503 aa13.95□□□□□ -0.18
POLR1A-202ENST00000409024 E9PCH4 1651 aa13.94□□□□□ -0.18
POLR1A-202ENST00000409024 EFCAB6Q5THR3 1501 aa13.94□□□□□ -0.18
POLR1A-202ENST00000409024 ZC3H13Q5T200 1668 aaKnown RBP13.93□□□□□ -0.18
POLR1A-202ENST00000409024 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
POLR1A-202ENST00000409024 TOM1O60784 492 aa13.92□□□□□ -0.18
POLR1A-202ENST00000409024 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
POLR1A-202ENST00000409024 C3P01024 1663 aa13.91□□□□□ -0.18
POLR1A-202ENST00000409024 CAMSAP1Q5T5Y3 1602 aa13.91□□□□□ -0.18
POLR1A-202ENST00000409024 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.18
POLR1A-202ENST00000409024 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
POLR1A-202ENST00000409024 ABCC3O15438 1527 aa13.9□□□□□ -0.19
POLR1A-202ENST00000409024 CNTLNQ9NXG0 1405 aa13.9□□□□□ -0.19
POLR1A-202ENST00000409024 GGT6Q6P531 493 aa13.89□□□□□ -0.19
POLR1A-202ENST00000409024 NPATQ14207 1427 aa13.88□□□□□ -0.19
POLR1A-202ENST00000409024 DIEXFQ68CQ4 756 aaKnown RBP13.87□□□□□ -0.19
POLR1A-202ENST00000409024 SPATA31E1Q6ZUB1 1445 aa13.87□□□□□ -0.19
POLR1A-202ENST00000409024 CEP152O94986 1710 aa13.85□□□□□ -0.19
POLR1A-202ENST00000409024 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
POLR1A-202ENST00000409024 NOS1P29475 1434 aa13.84□□□□□ -0.19
POLR1A-202ENST00000409024 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
POLR1A-202ENST00000409024 RALGAPBQ86X10 1494 aa13.84□□□□□ -0.19
POLR1A-202ENST00000409024 ZMYM3Q14202 1370 aa13.83□□□□□ -0.19
POLR1A-202ENST00000409024 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
POLR1A-202ENST00000409024 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
POLR1A-202ENST00000409024 SLC52A1Q9NWF4 448 aa13.81□□□□□ -0.2
POLR1A-202ENST00000409024 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms