RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 SPAG9O60271 1321 aaKnown RBP12.71□□□□□ -0.37
GPC3-203ENST00000406757 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.38
GPC3-203ENST00000406757 SETD1BQ9UPS6 1966 aaKnown RBP12.7□□□□□ -0.38
GPC3-203ENST00000406757 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
GPC3-203ENST00000406757 PTPRTO14522 1441 aa12.7□□□□□ -0.38
GPC3-203ENST00000406757 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
GPC3-203ENST00000406757 PTPN23Q9H3S7 1636 aa12.69□□□□□ -0.38
GPC3-203ENST00000406757 ZMYM3Q14202 1370 aa12.68□□□□□ -0.38
GPC3-203ENST00000406757 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
GPC3-203ENST00000406757 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
GPC3-203ENST00000406757 MIA2Q96PC5 1412 aa12.67□□□□□ -0.38
GPC3-203ENST00000406757 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
GPC3-203ENST00000406757 A2MP01023 1474 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 NPATQ14207 1427 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 MROH2AA6NES4 1674 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 GGT6Q6P531 493 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 CHIC2Q9UKJ5 165 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 CAMSAP1Q5T5Y3 1602 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 PLEKHH2Q8IVE3 1493 aa12.65□□□□□ -0.38
GPC3-203ENST00000406757 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
GPC3-203ENST00000406757 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
GPC3-203ENST00000406757 CLTCQ00610 1675 aaKnown RBP12.64□□□□□ -0.39
GPC3-203ENST00000406757 LTBP4Q8N2S1 1624 aa12.64□□□□□ -0.39
GPC3-203ENST00000406757 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
GPC3-203ENST00000406757 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
GPC3-203ENST00000406757 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
GPC3-203ENST00000406757 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
GPC3-203ENST00000406757 PTPRKQ15262 1439 aa12.62□□□□□ -0.39
GPC3-203ENST00000406757 MYO3AQ8NEV4 1616 aa12.6□□□□□ -0.39
GPC3-203ENST00000406757 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
GPC3-203ENST00000406757 ABCC5O15440 1437 aa12.6□□□□□ -0.39
GPC3-203ENST00000406757 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
GPC3-203ENST00000406757 MBD5Q9P267 1494 aa12.59□□□□□ -0.39
GPC3-203ENST00000406757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.4
GPC3-203ENST00000406757 ADGBQ8N7X0 1667 aa12.58□□□□□ -0.4
GPC3-203ENST00000406757 DAPK1P53355 1430 aa12.58□□□□□ -0.4
GPC3-203ENST00000406757 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.4
GPC3-203ENST00000406757 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
GPC3-203ENST00000406757 IQSEC2Q5JU85 1478 aa12.58□□□□□ -0.4
GPC3-203ENST00000406757 ZNF142P52746 1687 aaPredicted RBP12.57□□□□□ -0.4
GPC3-203ENST00000406757 ABCB7O75027 752 aa12.57□□□□□ -0.4
GPC3-203ENST00000406757 TSPY4P0CV99 314 aa12.56□□□□□ -0.4
GPC3-203ENST00000406757 TSPY10P0CW01 314 aa12.56□□□□□ -0.4
GPC3-203ENST00000406757 PKD2Q13563 968 aa12.56□□□□□ -0.4
GPC3-203ENST00000406757 PLA2R1Q13018 1463 aa12.56□□□□□ -0.4
GPC3-203ENST00000406757 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
GPC3-203ENST00000406757 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
GPC3-203ENST00000406757 RTEL1-TNFRSF6BF6WH68 1400 aa12.55□□□□□ -0.4
GPC3-203ENST00000406757 CCDC141Q6ZP82 1450 aa12.54□□□□□ -0.4
GPC3-203ENST00000406757 KIF3BO15066 747 aa12.54□□□□□ -0.4
GPC3-203ENST00000406757 SPATA31D1Q6ZQQ2 1576 aa12.54□□□□□ -0.4
GPC3-203ENST00000406757 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
GPC3-203ENST00000406757 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
GPC3-203ENST00000406757 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
GPC3-203ENST00000406757 FBXO31Q5XUX0 539 aaPredicted RBP12.53□□□□□ -0.4
GPC3-203ENST00000406757 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
GPC3-203ENST00000406757 SOCS7O14512 581 aa12.51□□□□□ -0.41
GPC3-203ENST00000406757 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
GPC3-203ENST00000406757 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
GPC3-203ENST00000406757 TNRQ92752 1358 aa12.5□□□□□ -0.41
GPC3-203ENST00000406757 KDM5DQ9BY66 1539 aa12.5□□□□□ -0.41
GPC3-203ENST00000406757 CROCC2H7BZ55 1655 aa12.5□□□□□ -0.41
GPC3-203ENST00000406757 PZPP20742 1482 aa12.48□□□□□ -0.41
GPC3-203ENST00000406757 ANKRD30AQ9BXX3 1397 aa12.47□□□□□ -0.41
GPC3-203ENST00000406757 NEURL4Q96JN8 1562 aa12.47□□□□□ -0.41
GPC3-203ENST00000406757 SHANK2Q9UPX8 1470 aa12.46□□□□□ -0.41
GPC3-203ENST00000406757 NAIPQ13075 1403 aa12.45□□□□□ -0.42
GPC3-203ENST00000406757 SETD5Q9C0A6 1442 aa12.45□□□□□ -0.42
GPC3-203ENST00000406757 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
GPC3-203ENST00000406757 ROCK1Q13464 1354 aa12.45□□□□□ -0.42
GPC3-203ENST00000406757 KIF15Q9NS87 1388 aa12.45□□□□□ -0.42
GPC3-203ENST00000406757 MAST1Q9Y2H9 1570 aa12.45□□□□□ -0.42
GPC3-203ENST00000406757 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
GPC3-203ENST00000406757 ADGRL2O95490 1459 aa12.45□□□□□ -0.42
GPC3-203ENST00000406757 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
GPC3-203ENST00000406757 ANKLE2Q86XL3 938 aa12.44□□□□□ -0.42
GPC3-203ENST00000406757 THEMISQ8N1K5 641 aaPredicted RBP12.44□□□□□ -0.42
GPC3-203ENST00000406757 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
GPC3-203ENST00000406757 RAB3GAP2Q9H2M9 1393 aa12.43□□□□□ -0.42
GPC3-203ENST00000406757 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
GPC3-203ENST00000406757 NLRP1Q9C000 1473 aa12.43□□□□□ -0.42
GPC3-203ENST00000406757 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
GPC3-203ENST00000406757 CPS1P31327 1500 aa12.42□□□□□ -0.42
GPC3-203ENST00000406757 TOM1O60784 492 aa12.41□□□□□ -0.42
GPC3-203ENST00000406757 NPHP4O75161 1426 aaPredicted RBP12.41□□□□□ -0.42
GPC3-203ENST00000406757 HSPA1LP34931 641 aa12.41□□□□□ -0.42
GPC3-203ENST00000406757 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
GPC3-203ENST00000406757 VWDEQ8N2E2 1590 aa12.4□□□□□ -0.42
GPC3-203ENST00000406757 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.42
GPC3-203ENST00000406757 ABCC3O15438 1527 aa12.4□□□□□ -0.42
GPC3-203ENST00000406757 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
GPC3-203ENST00000406757 GCC2Q8IWJ2 1684 aa12.39□□□□□ -0.43
GPC3-203ENST00000406757 MED14O60244 1454 aa12.39□□□□□ -0.43
GPC3-203ENST00000406757 DUOX2Q9NRD8 1548 aa12.38□□□□□ -0.43
GPC3-203ENST00000406757 DEPDC5O75140 1603 aa12.38□□□□□ -0.43
GPC3-203ENST00000406757 ERVK-7P63135 1459 aa12.37□□□□□ -0.43
GPC3-203ENST00000406757 ZC3H13Q5T200 1668 aaKnown RBP12.37□□□□□ -0.43
GPC3-203ENST00000406757 MROH1Q8NDA8 1641 aa12.37□□□□□ -0.43
GPC3-203ENST00000406757 EIF2AK4Q9P2K8 1649 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms