RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 KDM2AQ9Y2K7 1162 aa25.01■■□□□ 1.59
EWSR1-207ENST00000406548 ST20-MTHFSA0A0A6YYL1 179 aa25■■□□□ 1.59
EWSR1-207ENST00000406548 DCAF11Q8TEB1 546 aa25■■□□□ 1.59
EWSR1-207ENST00000406548 RNF123Q5XPI4 1314 aa25■■□□□ 1.59
EWSR1-207ENST00000406548 KTN1Q86UP2 1357 aaKnown RBP24.98■■□□□ 1.59
EWSR1-207ENST00000406548 TMC1Q8TDI8 760 aa24.98■■□□□ 1.59
EWSR1-207ENST00000406548 TRPM1Q7Z4N2 1603 aa24.98■■□□□ 1.59
EWSR1-207ENST00000406548 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
EWSR1-207ENST00000406548 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
EWSR1-207ENST00000406548 LRPPRCP42704 1394 aaKnown RBP24.95■■□□□ 1.59
EWSR1-207ENST00000406548 UNC13BO14795 1591 aa24.95■■□□□ 1.59
EWSR1-207ENST00000406548 MAST1Q9Y2H9 1570 aa24.95■■□□□ 1.58
EWSR1-207ENST00000406548 RSPH4AQ5TD94 716 aa24.94■■□□□ 1.58
EWSR1-207ENST00000406548 MYBBP1AQ9BQG0 1328 aaKnown RBP24.94■■□□□ 1.58
EWSR1-207ENST00000406548 PRAG1Q86YV5 1406 aa24.93■■□□□ 1.58
EWSR1-207ENST00000406548 CCDC144AA2RUR9 1427 aa24.93■■□□□ 1.58
EWSR1-207ENST00000406548 SYCP2Q9BX26 1530 aa24.93■■□□□ 1.58
EWSR1-207ENST00000406548 RALBP1Q15311 655 aa24.93■■□□□ 1.58
EWSR1-207ENST00000406548 TTC37Q6PGP7 1564 aa24.9■■□□□ 1.58
EWSR1-207ENST00000406548 ERICH6Q7L0X2 663 aa24.89■■□□□ 1.57
EWSR1-207ENST00000406548 ARHGAP5Q13017 1502 aa24.88■■□□□ 1.57
EWSR1-207ENST00000406548 LAMC1P11047 1609 aa24.87■■□□□ 1.57
EWSR1-207ENST00000406548 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
EWSR1-207ENST00000406548 PLXNC1O60486 1568 aa24.86■■□□□ 1.57
EWSR1-207ENST00000406548 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
EWSR1-207ENST00000406548 PLA2R1Q13018 1463 aa24.85■■□□□ 1.57
EWSR1-207ENST00000406548 GPRASP1Q5JY77 1395 aa24.85■■□□□ 1.57
EWSR1-207ENST00000406548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.85■■□□□ 1.57
EWSR1-207ENST00000406548 A2MP01023 1474 aa24.84■■□□□ 1.57
EWSR1-207ENST00000406548 SENP3-EIF4A1A0A087X0R7 540 aa24.84■■□□□ 1.57
EWSR1-207ENST00000406548 MYO5CQ9NQX4 1742 aa24.83■■□□□ 1.57
EWSR1-207ENST00000406548 PARD3Q8TEW0 1356 aa24.83■■□□□ 1.57
EWSR1-207ENST00000406548 CCDC136Q96JN2 1154 aa24.83■■□□□ 1.57
EWSR1-207ENST00000406548 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
EWSR1-207ENST00000406548 COL17A1Q9UMD9 1497 aaPredicted RBP24.81■■□□□ 1.56
EWSR1-207ENST00000406548 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
EWSR1-207ENST00000406548 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
EWSR1-207ENST00000406548 PLEKHH2Q8IVE3 1493 aa24.8■■□□□ 1.56
EWSR1-207ENST00000406548 NLRP13Q86W25 1043 aa24.8■■□□□ 1.56
EWSR1-207ENST00000406548 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
EWSR1-207ENST00000406548 NBPF1Q3BBV0 1214 aa24.77■■□□□ 1.56
EWSR1-207ENST00000406548 DUOX2Q9NRD8 1548 aa24.76■■□□□ 1.55
EWSR1-207ENST00000406548 MAGI2Q86UL8 1455 aa24.76■■□□□ 1.55
EWSR1-207ENST00000406548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.76■■□□□ 1.553e-7■■□□□ 13.3
EWSR1-207ENST00000406548 ABCC2Q92887 1545 aa24.75■■□□□ 1.55
EWSR1-207ENST00000406548 ATP10AO60312 1499 aa24.75■■□□□ 1.55
EWSR1-207ENST00000406548 PER1O15534 1290 aaPredicted RBP24.73■■□□□ 1.55
EWSR1-207ENST00000406548 DISP3Q9P2K9 1392 aa24.72■■□□□ 1.55
EWSR1-207ENST00000406548 ERBINQ96RT1 1412 aa24.72■■□□□ 1.55
EWSR1-207ENST00000406548 RRP1P56182 461 aaKnown RBP24.71■■□□□ 1.55
EWSR1-207ENST00000406548 TESK2Q96S53 571 aa24.7■■□□□ 1.55
EWSR1-207ENST00000406548 RNF17Q9BXT8 1623 aaKnown RBP24.7■■□□□ 1.54
EWSR1-207ENST00000406548 WASHC2CQ9Y4E1 1318 aa24.7■■□□□ 1.54
EWSR1-207ENST00000406548 PDE3BQ13370 1112 aa24.68■■□□□ 1.54
EWSR1-207ENST00000406548 ZMYM4Q5VZL5 1548 aa24.67■■□□□ 1.54
EWSR1-207ENST00000406548 RCAN3Q9UKA8 241 aa24.66■■□□□ 1.54
EWSR1-207ENST00000406548 INSRP06213 1382 aa24.66■■□□□ 1.54
EWSR1-207ENST00000406548 BLMP54132 1417 aaPredicted RBP24.64■■□□□ 1.54
EWSR1-207ENST00000406548 NOP58Q9Y2X3 529 aaKnown RBP24.63■■□□□ 1.53
EWSR1-207ENST00000406548 TMF1P82094 1093 aa24.62■■□□□ 1.53
EWSR1-207ENST00000406548 SALL2Q9Y467 1007 aaPredicted RBP24.62■■□□□ 1.53
EWSR1-207ENST00000406548 ABCC1P33527 1531 aa24.62■■□□□ 1.53
EWSR1-207ENST00000406548 PLCH2O75038 1416 aa24.62■■□□□ 1.53
EWSR1-207ENST00000406548 CC2D1BQ5T0F9 858 aaKnown RBP24.62■■□□□ 1.53
EWSR1-207ENST00000406548 PANK3Q9H999 370 aa24.61■■□□□ 1.53
EWSR1-207ENST00000406548 ZCCHC11Q5TAX3 1644 aaKnown RBP24.6■■□□□ 1.53
EWSR1-207ENST00000406548 EXOC6Q8TAG9 804 aa24.59■■□□□ 1.53
EWSR1-207ENST00000406548 MADDQ8WXG6 1647 aa24.59■■□□□ 1.53
EWSR1-207ENST00000406548 UHRF1BP1LA0JNW5 1464 aa24.59■■□□□ 1.53
EWSR1-207ENST00000406548 BCL11AQ9H165 835 aa24.58■■□□□ 1.52
EWSR1-207ENST00000406548 MYT1LQ9UL68 1186 aa24.57■■□□□ 1.52
EWSR1-207ENST00000406548 IQGAP1P46940 1657 aa24.57■■□□□ 1.52
EWSR1-207ENST00000406548 ANP32AP39687 249 aaKnown RBP24.57■■□□□ 1.52
EWSR1-207ENST00000406548 EFCAB2Q5VUJ9 269 aa24.55■■□□□ 1.52
EWSR1-207ENST00000406548 TRAPPC8Q9Y2L5 1435 aa24.54■■□□□ 1.52
EWSR1-207ENST00000406548 CDCA7LQ96GN5 454 aa24.54■■□□□ 1.52
EWSR1-207ENST00000406548 SPHKAPQ2M3C7 1700 aa24.54■■□□□ 1.52
EWSR1-207ENST00000406548 TRPM2O94759 1503 aa24.53■■□□□ 1.52
EWSR1-207ENST00000406548 CEP152O94986 1710 aa24.52■■□□□ 1.52
EWSR1-207ENST00000406548 PAK3O75914 559 aaPredicted RBP24.52■■□□□ 1.52
EWSR1-207ENST00000406548 IPO9Q96P70 1041 aaKnown RBP24.51■■□□□ 1.51
EWSR1-207ENST00000406548 WDR7Q9Y4E6 1490 aa24.51■■□□□ 1.51
EWSR1-207ENST00000406548 ZFYVE16Q7Z3T8 1539 aa24.49■■□□□ 1.51
EWSR1-207ENST00000406548 SYNMO15061 1565 aa24.48■■□□□ 1.51
EWSR1-207ENST00000406548 TCERG1O14776 1098 aaKnown RBP24.47■■□□□ 1.51
EWSR1-207ENST00000406548 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
EWSR1-207ENST00000406548 DEPDC5O75140 1603 aa24.47■■□□□ 1.51
EWSR1-207ENST00000406548 RTEL1-TNFRSF6BF6WH68 1400 aa24.47■■□□□ 1.51
EWSR1-207ENST00000406548 CLTCL1P53675 1640 aa24.46■■□□□ 1.51
EWSR1-207ENST00000406548 ARAP3Q8WWN8 1544 aa24.45■■□□□ 1.51
EWSR1-207ENST00000406548 PTPRTO14522 1441 aa24.45■■□□□ 1.5
EWSR1-207ENST00000406548 SCAF11Q99590 1463 aaKnown RBP24.44■■□□□ 1.5
EWSR1-207ENST00000406548 SPAG9O60271 1321 aaKnown RBP24.44■■□□□ 1.5
EWSR1-207ENST00000406548 SCAPERQ9BY12 1400 aa24.44■■□□□ 1.5
EWSR1-207ENST00000406548 TET3O43151 1660 aa24.43■■□□□ 1.5
EWSR1-207ENST00000406548 KNSTRNQ9Y448 316 aa24.42■■□□□ 1.5
EWSR1-207ENST00000406548 STAC3Q96MF2 364 aa24.41■■□□□ 1.5
EWSR1-207ENST00000406548 ZBTB47Q9UFB7 747 aaPredicted RBP24.41■■□□□ 1.5
EWSR1-207ENST00000406548 MYOM1P52179 1685 aa24.4■■□□□ 1.5
EWSR1-207ENST00000406548 CDCA8Q53HL2 280 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms