RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 ISY1Q9ULR0 285 aaKnown RBP6.34□□□□□ -1.39
HDAC9-204ENST00000406451 PLEKHH2Q8IVE3 1493 aa6.34□□□□□ -1.39
HDAC9-204ENST00000406451 TAOK2Q9UL54 1235 aa6.34□□□□□ -1.39
HDAC9-204ENST00000406451 NCOA2Q15596 1464 aa6.34□□□□□ -1.39
HDAC9-204ENST00000406451 CCER2I3L3R5 266 aa6.34□□□□□ -1.4
HDAC9-204ENST00000406451 HDAC5Q9UQL6 1122 aa6.34□□□□□ -1.4
HDAC9-204ENST00000406451 ZNF644Q9H582 1327 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-204ENST00000406451 LRRC9Q6ZRR7 1453 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 CUL7Q14999 1698 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 TULP1O00294 542 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-204ENST00000406451 TAF7LQ5H9L4 462 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 C1orf141Q5JVX7 400 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 POGZQ7Z3K3 1410 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 CHMP3Q9Y3E7 222 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 GTF2E1P29083 439 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-204ENST00000406451 IQGAP2Q13576 1575 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 SUPT6HQ7KZ85 1726 aaKnown RBP6.33□□□□□ -1.4
HDAC9-204ENST00000406451 EHBP1L1Q8N3D4 1523 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 ANKRD50Q9ULJ7 1429 aa6.33□□□□□ -1.4
HDAC9-204ENST00000406451 G3V3G9 751 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 DCAF8Q5TAQ9 597 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 PHLDB1Q86UU1 1377 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 ST20-MTHFSA0A0A6YYL1 179 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 AFAP1Q8N556 730 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 DHX57Q6P158 1386 aaKnown RBP6.32□□□□□ -1.4
HDAC9-204ENST00000406451 GORABQ5T7V8 394 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 MCCP23508 829 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 NLRP13Q86W25 1043 aa6.32□□□□□ -1.4
HDAC9-204ENST00000406451 USP47Q96K76 1375 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 ITPRIPQ8IWB1 547 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 PPP4R2Q9NY27 417 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 NBR1Q14596 966 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 APBB1O00213 710 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 GPATCH3Q96I76 525 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 RRBP1Q9P2E9 1410 aaKnown RBP6.31□□□□□ -1.4
HDAC9-204ENST00000406451 CFAP44Q96MT7 982 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 DNAJC5BQ9UF47 199 aa6.31□□□□□ -1.4
HDAC9-204ENST00000406451 KIAA1211Q6ZU35 1233 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 MAGI1Q96QZ7 1491 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-204ENST00000406451 MSH5O43196 834 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 STAC3Q96MF2 364 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 PANK3Q9H999 370 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 MIA2Q96PC5 1412 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 TPRNQ4KMQ1 711 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 ANP32EQ9BTT0 268 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 KIAA0586Q9BVV6 1533 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 CCDC146Q8IYE0 955 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 SMC4Q9NTJ3 1288 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 C9orf84Q5VXU9 1444 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 ABCA10Q8WWZ4 1543 aa6.3□□□□□ -1.4
HDAC9-204ENST00000406451 TROQ12816 1431 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-204ENST00000406451 TTC5Q8N0Z6 440 aa6.29□□□□□ -1.4
HDAC9-204ENST00000406451 CENPJQ9HC77 1338 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-204ENST00000406451 HMMRO75330 724 aa6.29□□□□□ -1.4
HDAC9-204ENST00000406451 HSP90AB1P08238 724 aaKnown RBP6.29□□□□□ -1.4
HDAC9-204ENST00000406451 SCAPERQ9BY12 1400 aa6.29□□□□□ -1.4
HDAC9-204ENST00000406451 TEFQ10587 303 aa6.29□□□□□ -1.4
HDAC9-204ENST00000406451 TXNDC2Q86VQ3 553 aa6.29□□□□□ -1.4
HDAC9-204ENST00000406451 THEMISQ8N1K5 641 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-204ENST00000406451 KAT6BQ8WYB5 2073 aa6.29□□□□□ -1.4
HDAC9-204ENST00000406451 SYTL4Q96C24 671 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-204ENST00000406451 SLC4A10Q6U841 1118 aa6.29□□□□□ -1.4
HDAC9-204ENST00000406451 PROSER2Q86WR7 435 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-204ENST00000406451 GPRASP1Q5JY77 1395 aa6.28□□□□□ -1.4
HDAC9-204ENST00000406451 RCAN3Q9UKA8 241 aa6.28□□□□□ -1.4
HDAC9-204ENST00000406451 PHF23Q9BUL5 403 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-204ENST00000406451 KIF14Q15058 1648 aa6.27□□□□□ -1.41
HDAC9-204ENST00000406451 FRAT2O75474 233 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-204ENST00000406451 MYBBP1AQ9BQG0 1328 aaKnown RBP6.27□□□□□ -1.41
HDAC9-204ENST00000406451 RWDD1Q9H446 243 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-204ENST00000406451 RAPGEF3O95398 923 aa6.27□□□□□ -1.41
HDAC9-204ENST00000406451 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
HDAC9-204ENST00000406451 ARAP1Q96P48 1450 aa6.27□□□□□ -1.41
HDAC9-204ENST00000406451 GRIN2AQ12879 1464 aa6.27□□□□□ -1.41
HDAC9-204ENST00000406451 HSCBQ8IWL3 235 aa6.26□□□□□ -1.41
HDAC9-204ENST00000406451 GOLGA6L4A6NEF3 574 aa6.26□□□□□ -1.41
HDAC9-204ENST00000406451 ANKLE2Q86XL3 938 aa6.26□□□□□ -1.41
HDAC9-204ENST00000406451 RRP7AQ9Y3A4 280 aaKnown RBP6.26□□□□□ -1.41
HDAC9-204ENST00000406451 RAPGEF4Q8WZA2 1011 aa6.26□□□□□ -1.41
HDAC9-204ENST00000406451 PRXQ9BXM0 1461 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 B4GALNT3Q6L9W6 998 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 NLRP2Q9NX02 1062 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 CD109Q6YHK3 1445 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 DIAPH1O60610 1272 aaKnown RBP6.25□□□□□ -1.41
HDAC9-204ENST00000406451 CLSTN1O94985 981 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 CDK13Q14004 1512 aaKnown RBP6.25□□□□□ -1.41
HDAC9-204ENST00000406451 ESCO1Q5FWF5 840 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 NEXNQ0ZGT2 675 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 TIAM1Q13009 1591 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 PTMAP06454 111 aaKnown RBP6.25□□□□□ -1.41
HDAC9-204ENST00000406451 NUTM2GQ5VZR2 741 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 TMEM132EQ6IEE7 984 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 SLC52A1Q9NWF4 448 aa6.25□□□□□ -1.41
HDAC9-204ENST00000406451 PDE3BQ13370 1112 aa6.24□□□□□ -1.41
HDAC9-204ENST00000406451 EPRSP07814 1512 aaKnown RBP6.24□□□□□ -1.41
HDAC9-204ENST00000406451 PMFBP1Q8TBY8 1022 aa6.24□□□□□ -1.41
HDAC9-204ENST00000406451 CABP2Q9NPB3 220 aa6.24□□□□□ -1.41
HDAC9-204ENST00000406451 PEG3Q9GZU2 1588 aa6.24□□□□□ -1.41
HDAC9-204ENST00000406451 TRIM6-TRIM34B2RNG4 842 aa6.24□□□□□ -1.41
HDAC9-204ENST00000406451 URB2Q14146 1524 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms