RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 MSNP26038 577 aaKnown RBP17.72■□□□□ 0.43
HMGA2-204ENST00000403681 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.43
HMGA2-204ENST00000403681 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
HMGA2-204ENST00000403681 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
HMGA2-204ENST00000403681 GBP4Q96PP9 640 aa17.71■□□□□ 0.43
HMGA2-204ENST00000403681 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.42
HMGA2-204ENST00000403681 APAF1O14727 1248 aa17.7■□□□□ 0.42
HMGA2-204ENST00000403681 ANKRD30BQ9BXX2 1392 aa17.7■□□□□ 0.42
HMGA2-204ENST00000403681 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
HMGA2-204ENST00000403681 PTPN23Q9H3S7 1636 aa17.69■□□□□ 0.42
HMGA2-204ENST00000403681 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
HMGA2-204ENST00000403681 PTMAP06454 111 aaKnown RBP17.68■□□□□ 0.42
HMGA2-204ENST00000403681 BIVM-ERCC5R4GMW8 1640 aa17.68■□□□□ 0.42
HMGA2-204ENST00000403681 E9PSI1 815 aa17.68■□□□□ 0.42
HMGA2-204ENST00000403681 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.423e-8■■□□□ 13.1
HMGA2-204ENST00000403681 HNRNPMP52272 730 aaKnown RBP eCLIP17.66■□□□□ 0.422e-8■■□□□ 11.6
HMGA2-204ENST00000403681 MORC1Q86VD1 984 aa17.66■□□□□ 0.42
HMGA2-204ENST00000403681 DNTTIP2Q5QJE6 756 aaKnown RBP17.65■□□□□ 0.42
HMGA2-204ENST00000403681 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
HMGA2-204ENST00000403681 EHBP1L1Q8N3D4 1523 aa17.65■□□□□ 0.42
HMGA2-204ENST00000403681 TOPBP1Q92547 1522 aa17.65■□□□□ 0.42
HMGA2-204ENST00000403681 SLC24A1O60721 1099 aa17.64■□□□□ 0.42
HMGA2-204ENST00000403681 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
HMGA2-204ENST00000403681 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
HMGA2-204ENST00000403681 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.41
HMGA2-204ENST00000403681 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
HMGA2-204ENST00000403681 UBE2Q2Q8WVN8 375 aa17.63■□□□□ 0.41
HMGA2-204ENST00000403681 CHMP5Q9NZZ3 219 aa17.63■□□□□ 0.41
HMGA2-204ENST00000403681 POGKQ9P215 609 aa17.62■□□□□ 0.41
HMGA2-204ENST00000403681 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
HMGA2-204ENST00000403681 PTMSP20962 102 aa17.61■□□□□ 0.41
HMGA2-204ENST00000403681 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
HMGA2-204ENST00000403681 WASHC2CQ9Y4E1 1318 aa17.61■□□□□ 0.41
HMGA2-204ENST00000403681 ITPRIPQ8IWB1 547 aa17.61■□□□□ 0.41
HMGA2-204ENST00000403681 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
HMGA2-204ENST00000403681 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
HMGA2-204ENST00000403681 RPRD2Q5VT52 1461 aaKnown RBP17.6■□□□□ 0.41
HMGA2-204ENST00000403681 PANK1Q8TE04 598 aa17.6■□□□□ 0.41
HMGA2-204ENST00000403681 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
HMGA2-204ENST00000403681 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
HMGA2-204ENST00000403681 ANKRD50Q9ULJ7 1429 aa17.59■□□□□ 0.41
HMGA2-204ENST00000403681 SUPT6HQ7KZ85 1726 aaKnown RBP17.59■□□□□ 0.41
HMGA2-204ENST00000403681 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
HMGA2-204ENST00000403681 MRE11P49959 708 aa17.57■□□□□ 0.4
HMGA2-204ENST00000403681 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
HMGA2-204ENST00000403681 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
HMGA2-204ENST00000403681 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.48e-8■■□□□ 13.6
HMGA2-204ENST00000403681 PKNOX2Q96KN3 472 aa17.57■□□□□ 0.4
HMGA2-204ENST00000403681 BCAR3O75815 825 aa17.56■□□□□ 0.4
HMGA2-204ENST00000403681 SMC4Q9NTJ3 1288 aa17.56■□□□□ 0.4
HMGA2-204ENST00000403681 TRAK2O60296 914 aa17.56■□□□□ 0.4
HMGA2-204ENST00000403681 ARID3AQ99856 593 aa17.56■□□□□ 0.4
HMGA2-204ENST00000403681 DAPK1P53355 1430 aa17.55■□□□□ 0.4
HMGA2-204ENST00000403681 PPP2R1AP30153 589 aa17.54■□□□□ 0.4
HMGA2-204ENST00000403681 CHMP4BQ9H444 224 aaKnown RBP17.54■□□□□ 0.4
HMGA2-204ENST00000403681 CASC1Q6TDU7 716 aa17.54■□□□□ 0.4
HMGA2-204ENST00000403681 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
HMGA2-204ENST00000403681 C22orf23Q9BZE7 217 aa17.53■□□□□ 0.4
HMGA2-204ENST00000403681 IPO8O15397 1037 aaKnown RBP17.53■□□□□ 0.4
HMGA2-204ENST00000403681 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
HMGA2-204ENST00000403681 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
HMGA2-204ENST00000403681 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
HMGA2-204ENST00000403681 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.39
HMGA2-204ENST00000403681 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
HMGA2-204ENST00000403681 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
HMGA2-204ENST00000403681 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
HMGA2-204ENST00000403681 DDX49Q9Y6V7 483 aaKnown RBP17.5■□□□□ 0.39
HMGA2-204ENST00000403681 DHX29Q7Z478 1369 aaKnown RBP17.5■□□□□ 0.39
HMGA2-204ENST00000403681 ZKSCAN2Q63HK3 967 aa17.49■□□□□ 0.39
HMGA2-204ENST00000403681 RSPH4AQ5TD94 716 aa17.49■□□□□ 0.39
HMGA2-204ENST00000403681 MCM4P33991 863 aa17.48■□□□□ 0.39
HMGA2-204ENST00000403681 PDZRN3Q9UPQ7 1066 aa17.48■□□□□ 0.39
HMGA2-204ENST00000403681 PLCB2Q00722 1185 aa17.48■□□□□ 0.39
HMGA2-204ENST00000403681 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
HMGA2-204ENST00000403681 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
HMGA2-204ENST00000403681 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
HMGA2-204ENST00000403681 SLFN5Q08AF3 891 aa17.46■□□□□ 0.39
HMGA2-204ENST00000403681 ABCA10Q8WWZ4 1543 aa17.46■□□□□ 0.39
HMGA2-204ENST00000403681 AAMPQ13685 434 aa17.45■□□□□ 0.38
HMGA2-204ENST00000403681 ABCC5O15440 1437 aa17.45■□□□□ 0.38
HMGA2-204ENST00000403681 C8orf34Q49A92 452 aa17.45■□□□□ 0.38
HMGA2-204ENST00000403681 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
HMGA2-204ENST00000403681 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
HMGA2-204ENST00000403681 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
HMGA2-204ENST00000403681 ESPNB1AK53 854 aa17.43■□□□□ 0.38
HMGA2-204ENST00000403681 RRP9O43818 475 aaKnown RBP17.43■□□□□ 0.38
HMGA2-204ENST00000403681 GRPEL1Q9HAV7 217 aa17.42■□□□□ 0.38
HMGA2-204ENST00000403681 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
HMGA2-204ENST00000403681 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
HMGA2-204ENST00000403681 FAM13BQ9NYF5 915 aa17.42■□□□□ 0.38
HMGA2-204ENST00000403681 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
HMGA2-204ENST00000403681 JPH4Q96JJ6 628 aa17.39■□□□□ 0.38
HMGA2-204ENST00000403681 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.38
HMGA2-204ENST00000403681 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
HMGA2-204ENST00000403681 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
HMGA2-204ENST00000403681 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.37
HMGA2-204ENST00000403681 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
HMGA2-204ENST00000403681 HECW1Q76N89 1606 aa17.38■□□□□ 0.37
HMGA2-204ENST00000403681 APBB1O00213 710 aa17.38■□□□□ 0.37
HMGA2-204ENST00000403681 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms