RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 RALBP1Q15311 655 aa15.98■□□□□ 0.15
RBM39-206ENST00000403542 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
RBM39-206ENST00000403542 LAS1LQ9Y4W2 734 aaKnown RBP15.97■□□□□ 0.15
RBM39-206ENST00000403542 RALGAPBQ86X10 1494 aa15.97■□□□□ 0.15
RBM39-206ENST00000403542 NLRP13Q86W25 1043 aa15.97■□□□□ 0.15
RBM39-206ENST00000403542 PANK3Q9H999 370 aa15.97■□□□□ 0.15
RBM39-206ENST00000403542 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.15
RBM39-206ENST00000403542 ATP10BO94823 1461 aa15.95■□□□□ 0.14
RBM39-206ENST00000403542 ADGRL2O95490 1459 aa15.95■□□□□ 0.14
RBM39-206ENST00000403542 POLR1AO95602 1720 aaPredicted RBP15.95■□□□□ 0.14
RBM39-206ENST00000403542 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
RBM39-206ENST00000403542 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
RBM39-206ENST00000403542 MAGI1Q96QZ7 1491 aaPredicted RBP15.95■□□□□ 0.14
RBM39-206ENST00000403542 LRPPRCP42704 1394 aaKnown RBP15.94■□□□□ 0.14
RBM39-206ENST00000403542 ADGBQ8N7X0 1667 aa15.93■□□□□ 0.14
RBM39-206ENST00000403542 ITSN2Q9NZM3 1697 aa15.93■□□□□ 0.14
RBM39-206ENST00000403542 CCDC144AA2RUR9 1427 aa15.93■□□□□ 0.14
RBM39-206ENST00000403542 UHRF1BP1Q6BDS2 1440 aa15.93■□□□□ 0.14
RBM39-206ENST00000403542 DISP3Q9P2K9 1392 aa15.92■□□□□ 0.14
RBM39-206ENST00000403542 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
RBM39-206ENST00000403542 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
RBM39-206ENST00000403542 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
RBM39-206ENST00000403542 PDE4AP27815 886 aa15.91■□□□□ 0.14
RBM39-206ENST00000403542 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
RBM39-206ENST00000403542 CRBNQ96SW2 442 aa15.9■□□□□ 0.14
RBM39-206ENST00000403542 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
RBM39-206ENST00000403542 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
RBM39-206ENST00000403542 ABCC10Q5T3U5 1492 aa15.87■□□□□ 0.13
RBM39-206ENST00000403542 CROCC2H7BZ55 1655 aa15.87■□□□□ 0.13
RBM39-206ENST00000403542 TESK2Q96S53 571 aa15.87■□□□□ 0.13
RBM39-206ENST00000403542 PTPRGP23470 1445 aa15.86■□□□□ 0.13
RBM39-206ENST00000403542 PRAG1Q86YV5 1406 aa15.86■□□□□ 0.13
RBM39-206ENST00000403542 SLC4A3P48751 1232 aa15.85■□□□□ 0.13
RBM39-206ENST00000403542 PARD3Q8TEW0 1356 aa15.85■□□□□ 0.13
RBM39-206ENST00000403542 FAM135AQ9P2D6 1515 aa15.85■□□□□ 0.13
RBM39-206ENST00000403542 TMF1P82094 1093 aa15.84■□□□□ 0.13
RBM39-206ENST00000403542 CCDC146Q8IYE0 955 aa15.84■□□□□ 0.13
RBM39-206ENST00000403542 ARHGEF12Q9NZN5 1544 aa15.83■□□□□ 0.12
RBM39-206ENST00000403542 TCERG1O14776 1098 aaKnown RBP15.82■□□□□ 0.12
RBM39-206ENST00000403542 NEFMP07197 916 aa15.82■□□□□ 0.12
RBM39-206ENST00000403542 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
RBM39-206ENST00000403542 PLEKHH2Q8IVE3 1493 aa15.82■□□□□ 0.12
RBM39-206ENST00000403542 BACH2Q9BYV9 841 aa15.81■□□□□ 0.12
RBM39-206ENST00000403542 ADCY10Q96PN6 1610 aa15.81■□□□□ 0.12
RBM39-206ENST00000403542 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
RBM39-206ENST00000403542 A2MP01023 1474 aa15.81■□□□□ 0.12
RBM39-206ENST00000403542 CCDC141Q6ZP82 1450 aa15.81■□□□□ 0.12
RBM39-206ENST00000403542 NUP160Q12769 1436 aa15.8■□□□□ 0.12
RBM39-206ENST00000403542 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.123e-7■■□□□ 11.8
RBM39-206ENST00000403542 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
RBM39-206ENST00000403542 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
RBM39-206ENST00000403542 KDM5DQ9BY66 1539 aa15.8■□□□□ 0.12
RBM39-206ENST00000403542 ABCA8O94911 1581 aa15.8■□□□□ 0.12
RBM39-206ENST00000403542 SHANK2Q9UPX8 1470 aa15.79■□□□□ 0.12
RBM39-206ENST00000403542 PDE3BQ13370 1112 aa15.79■□□□□ 0.12
RBM39-206ENST00000403542 SYCP2Q9BX26 1530 aa15.79■□□□□ 0.12
RBM39-206ENST00000403542 ERBINQ96RT1 1412 aa15.78■□□□□ 0.12
RBM39-206ENST00000403542 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
RBM39-206ENST00000403542 RGS3P49796 1198 aa15.77■□□□□ 0.12
RBM39-206ENST00000403542 SAMD9LQ8IVG5 1584 aa15.77■□□□□ 0.12
RBM39-206ENST00000403542 PPP2R1AP30153 589 aa15.75■□□□□ 0.11
RBM39-206ENST00000403542 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
RBM39-206ENST00000403542 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
RBM39-206ENST00000403542 AFAP1Q8N556 730 aa15.74■□□□□ 0.11
RBM39-206ENST00000403542 COL17A1Q9UMD9 1497 aaPredicted RBP15.74■□□□□ 0.11
RBM39-206ENST00000403542 IL27Q8NEV9 243 aa15.73■□□□□ 0.11
RBM39-206ENST00000403542 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
RBM39-206ENST00000403542 TRPM1Q7Z4N2 1603 aa15.72■□□□□ 0.11
RBM39-206ENST00000403542 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
RBM39-206ENST00000403542 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
RBM39-206ENST00000403542 E9PCH4 1651 aa15.71■□□□□ 0.11
RBM39-206ENST00000403542 APAF1O14727 1248 aa15.71■□□□□ 0.11
RBM39-206ENST00000403542 NEUROD2Q15784 382 aa15.71■□□□□ 0.11
RBM39-206ENST00000403542 CDC42BPBQ9Y5S2 1711 aa15.7■□□□□ 0.1
RBM39-206ENST00000403542 DUSP27Q5VZP5 1158 aa15.7■□□□□ 0.1
RBM39-206ENST00000403542 BCAR3O75815 825 aa15.69■□□□□ 0.1
RBM39-206ENST00000403542 MAGI2Q86UL8 1455 aa15.69■□□□□ 0.1
RBM39-206ENST00000403542 GPRASP1Q5JY77 1395 aa15.69■□□□□ 0.1
RBM39-206ENST00000403542 GOLGA2Q08379 1002 aa15.69■□□□□ 0.1
RBM39-206ENST00000403542 MS4A1P11836 297 aa15.69■□□□□ 0.1
RBM39-206ENST00000403542 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
RBM39-206ENST00000403542 TTC37Q6PGP7 1564 aa15.69■□□□□ 0.1
RBM39-206ENST00000403542 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
RBM39-206ENST00000403542 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
RBM39-206ENST00000403542 ARHGEF5Q12774 1597 aa15.67■□□□□ 0.1
RBM39-206ENST00000403542 BLMP54132 1417 aaPredicted RBP15.67■□□□□ 0.1
RBM39-206ENST00000403542 WASHC2CQ9Y4E1 1318 aa15.66■□□□□ 0.1
RBM39-206ENST00000403542 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
RBM39-206ENST00000403542 CFAP70Q5T0N1 1121 aa15.65■□□□□ 0.1
RBM39-206ENST00000403542 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
RBM39-206ENST00000403542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.64■□□□□ 0.09
RBM39-206ENST00000403542 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
RBM39-206ENST00000403542 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
RBM39-206ENST00000403542 TRAPPC8Q9Y2L5 1435 aa15.63■□□□□ 0.09
RBM39-206ENST00000403542 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
RBM39-206ENST00000403542 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
RBM39-206ENST00000403542 PREX2Q70Z35 1606 aa15.63■□□□□ 0.09
RBM39-206ENST00000403542 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
RBM39-206ENST00000403542 KIF3BO15066 747 aa15.62■□□□□ 0.09
RBM39-206ENST00000403542 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms