RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 NAIPQ13075 1403 aa9.29□□□□□ -0.92
CEACAM1-207ENST00000403444 SIN3AQ96ST3 1273 aa9.28□□□□□ -0.92
CEACAM1-207ENST00000403444 FANCAO15360 1455 aa9.28□□□□□ -0.92
CEACAM1-207ENST00000403444 NEURL4Q96JN8 1562 aa9.28□□□□□ -0.92
CEACAM1-207ENST00000403444 TSHZ2Q9NRE2 1034 aa9.28□□□□□ -0.92
CEACAM1-207ENST00000403444 LMTK2Q8IWU2 1503 aa9.27□□□□□ -0.93
CEACAM1-207ENST00000403444 DNAJC5Q9H3Z4 198 aa9.27□□□□□ -0.93
CEACAM1-207ENST00000403444 TSPOAP1O95153 1857 aa9.26□□□□□ -0.93
CEACAM1-207ENST00000403444 DUOX2Q9NRD8 1548 aa9.26□□□□□ -0.93
CEACAM1-207ENST00000403444 MROH2AA6NES4 1674 aa9.25□□□□□ -0.93
CEACAM1-207ENST00000403444 IFT172Q9UG01 1749 aa9.25□□□□□ -0.93
CEACAM1-207ENST00000403444 NCOA1Q15788 1441 aa9.25□□□□□ -0.93
CEACAM1-207ENST00000403444 IRX6P78412 446 aaPredicted RBP9.25□□□□□ -0.93
CEACAM1-207ENST00000403444 AGLP35573 1532 aa9.25□□□□□ -0.93
CEACAM1-207ENST00000403444 TET3O43151 1660 aa9.24□□□□□ -0.93
CEACAM1-207ENST00000403444 ERBINQ96RT1 1412 aa9.24□□□□□ -0.93
CEACAM1-207ENST00000403444 ZNF518AQ6AHZ1 1483 aa9.24□□□□□ -0.93
CEACAM1-207ENST00000403444 PIK3C2BO00750 1634 aa9.24□□□□□ -0.93
CEACAM1-207ENST00000403444 E9PCH4 1651 aa9.24□□□□□ -0.93
CEACAM1-207ENST00000403444 TRAPPC8Q9Y2L5 1435 aa9.24□□□□□ -0.93
CEACAM1-207ENST00000403444 TEX14Q8IWB6 1497 aa9.23□□□□□ -0.93
CEACAM1-207ENST00000403444 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.23□□□□□ -0.93
CEACAM1-207ENST00000403444 CEP152O94986 1710 aa9.23□□□□□ -0.93
CEACAM1-207ENST00000403444 PZPP20742 1482 aa9.22□□□□□ -0.93
CEACAM1-207ENST00000403444 C9orf84Q5VXU9 1444 aa9.22□□□□□ -0.93
CEACAM1-207ENST00000403444 ADGRL1O94910 1474 aa9.22□□□□□ -0.93
CEACAM1-207ENST00000403444 COL17A1Q9UMD9 1497 aaPredicted RBP9.22□□□□□ -0.93
CEACAM1-207ENST00000403444 CD109Q6YHK3 1445 aa9.22□□□□□ -0.93
CEACAM1-207ENST00000403444 FKBP8Q14318 412 aa9.21□□□□□ -0.93
CEACAM1-207ENST00000403444 CHIC2Q9UKJ5 165 aa9.21□□□□□ -0.94
CEACAM1-207ENST00000403444 CAMSAP1Q5T5Y3 1602 aa9.21□□□□□ -0.94
CEACAM1-207ENST00000403444 SPHKAPQ2M3C7 1700 aa9.21□□□□□ -0.94
CEACAM1-207ENST00000403444 KDM5AP29375 1690 aaKnown RBP9.21□□□□□ -0.94
CEACAM1-207ENST00000403444 CDK11AQ9UQ88 783 aaPredicted RBP9.2□□□□□ -0.94
CEACAM1-207ENST00000403444 FOXD1Q16676 465 aa9.2□□□□□ -0.94
CEACAM1-207ENST00000403444 ATP10AO60312 1499 aa9.2□□□□□ -0.94
CEACAM1-207ENST00000403444 PLEKHD1A6NEE1 506 aa9.19□□□□□ -0.94
CEACAM1-207ENST00000403444 NEFLP07196 543 aa9.18□□□□□ -0.94
CEACAM1-207ENST00000403444 ZNF644Q9H582 1327 aaPredicted RBP9.17□□□□□ -0.94
CEACAM1-207ENST00000403444 EFCAB6Q5THR3 1501 aa9.17□□□□□ -0.94
CEACAM1-207ENST00000403444 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
CEACAM1-207ENST00000403444 SETD5Q9C0A6 1442 aa9.17□□□□□ -0.94
CEACAM1-207ENST00000403444 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
CEACAM1-207ENST00000403444 ADAMTSL3P82987 1691 aa9.15□□□□□ -0.94
CEACAM1-207ENST00000403444 PREX1Q8TCU6 1659 aa9.14□□□□□ -0.95
CEACAM1-207ENST00000403444 DHX57Q6P158 1386 aaKnown RBP9.14□□□□□ -0.95
CEACAM1-207ENST00000403444 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
CEACAM1-207ENST00000403444 TRPM2O94759 1503 aa9.13□□□□□ -0.95
CEACAM1-207ENST00000403444 RAB3GAP2Q9H2M9 1393 aa9.13□□□□□ -0.95
CEACAM1-207ENST00000403444 ABCC3O15438 1527 aa9.13□□□□□ -0.95
CEACAM1-207ENST00000403444 DEKP35659 375 aaKnown RBP9.13□□□□□ -0.95
CEACAM1-207ENST00000403444 SCAPERQ9BY12 1400 aa9.12□□□□□ -0.95
CEACAM1-207ENST00000403444 SYNMO15061 1565 aa9.12□□□□□ -0.95
CEACAM1-207ENST00000403444 RRP7BPQ9NSQ0 103 aa9.12□□□□□ -0.95
CEACAM1-207ENST00000403444 ZNF142P52746 1687 aaPredicted RBP9.12□□□□□ -0.95
CEACAM1-207ENST00000403444 ERICH6BQ5W0A0 696 aa9.11□□□□□ -0.95
CEACAM1-207ENST00000403444 SETD1AO15047 1707 aaKnown RBP9.11□□□□□ -0.95
CEACAM1-207ENST00000403444 CYB5RLQ6IPT4 315 aa9.11□□□□□ -0.95
CEACAM1-207ENST00000403444 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 LAMC1P11047 1609 aa9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 CLTCL1P53675 1640 aa9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 PTPRTO14522 1441 aa9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 POLR1AO95602 1720 aaPredicted RBP9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 SPATA31D1Q6ZQQ2 1576 aa9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 PPLO60437 1756 aa9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 A2MP01023 1474 aa9.1□□□□□ -0.95
CEACAM1-207ENST00000403444 FER1L4A9Z1Z3 1794 aa9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 PLA2R1Q13018 1463 aa9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 C3P01024 1663 aa9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 KIAA1210Q9ULL0 1709 aa9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 RPRD2Q5VT52 1461 aaKnown RBP9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 ANP32CO43423 234 aa9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 CFDP1Q9UEE9 299 aaPredicted RBP9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 ANKRD50Q9ULJ7 1429 aa9.09□□□□□ -0.95
CEACAM1-207ENST00000403444 ARHGAP31Q2M1Z3 1444 aa9.08□□□□□ -0.96
CEACAM1-207ENST00000403444 YEATS2Q9ULM3 1422 aa9.08□□□□□ -0.96
CEACAM1-207ENST00000403444 HNRNPUQ00839 825 aaKnown RBP eCLIP9.08□□□□□ -0.96
CEACAM1-207ENST00000403444 DHX29Q7Z478 1369 aaKnown RBP9.08□□□□□ -0.96
CEACAM1-207ENST00000403444 ANKRD30AQ9BXX3 1397 aa9.08□□□□□ -0.96
CEACAM1-207ENST00000403444 KIF15Q9NS87 1388 aa9.08□□□□□ -0.96
CEACAM1-207ENST00000403444 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
CEACAM1-207ENST00000403444 MADDQ8WXG6 1647 aa9.07□□□□□ -0.96
CEACAM1-207ENST00000403444 MYO5BQ9ULV0 1848 aa9.07□□□□□ -0.96
CEACAM1-207ENST00000403444 EFCAB2Q5VUJ9 269 aa9.07□□□□□ -0.96
CEACAM1-207ENST00000403444 FAM9BQ8IZU0 186 aa9.07□□□□□ -0.96
CEACAM1-207ENST00000403444 CLSPNQ9HAW4 1339 aa9.07□□□□□ -0.96
CEACAM1-207ENST00000403444 ADGRB3O60242 1522 aa9.07□□□□□ -0.96
CEACAM1-207ENST00000403444 TMEM131LA2VDJ0 1609 aa9.05□□□□□ -0.96
CEACAM1-207ENST00000403444 ADRA2BP18089 450 aa9.05□□□□□ -0.96
CEACAM1-207ENST00000403444 KIF1BO60333 1816 aa9.05□□□□□ -0.96
CEACAM1-207ENST00000403444 ZNF777Q9ULD5 760 aaPredicted RBP9.05□□□□□ -0.96
CEACAM1-207ENST00000403444 TRPM1Q7Z4N2 1603 aa9.05□□□□□ -0.96
CEACAM1-207ENST00000403444 NRXN1Q9ULB1 1477 aa9.04□□□□□ -0.96
CEACAM1-207ENST00000403444 PDE4CQ08493 712 aa9.04□□□□□ -0.96
CEACAM1-207ENST00000403444 MYT1LQ9UL68 1186 aa9.04□□□□□ -0.96
CEACAM1-207ENST00000403444 UBR1Q8IWV7 1749 aa9.04□□□□□ -0.96
CEACAM1-207ENST00000403444 A0A0U1RQG5 324 aaPredicted RBP9.03□□□□□ -0.96
CEACAM1-207ENST00000403444 NOS1P29475 1434 aa9.03□□□□□ -0.96
CEACAM1-207ENST00000403444 TONSLQ96HA7 1378 aa9.03□□□□□ -0.96
CEACAM1-207ENST00000403444 ANKRD30BQ9BXX2 1392 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms