RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
R3HDM2-204ENST00000402412 SLC4A3P48751 1232 aa17.68■□□□□ 0.42
R3HDM2-204ENST00000402412 PLIN1O60240 522 aa17.68■□□□□ 0.42
R3HDM2-204ENST00000402412 TMF1P82094 1093 aa17.68■□□□□ 0.42
R3HDM2-204ENST00000402412 DNTTIP2Q5QJE6 756 aaKnown RBP17.67■□□□□ 0.42
R3HDM2-204ENST00000402412 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
R3HDM2-204ENST00000402412 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
R3HDM2-204ENST00000402412 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
R3HDM2-204ENST00000402412 ARID3AQ99856 593 aa17.67■□□□□ 0.42
R3HDM2-204ENST00000402412 ATP10BO94823 1461 aa17.67■□□□□ 0.42
R3HDM2-204ENST00000402412 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
R3HDM2-204ENST00000402412 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
R3HDM2-204ENST00000402412 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
R3HDM2-204ENST00000402412 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.65■□□□□ 0.42
R3HDM2-204ENST00000402412 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
R3HDM2-204ENST00000402412 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.427e-7■■■■□ 23.3
R3HDM2-204ENST00000402412 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.424e-7■■■■□ 24.4
R3HDM2-204ENST00000402412 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
R3HDM2-204ENST00000402412 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
R3HDM2-204ENST00000402412 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
R3HDM2-204ENST00000402412 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
R3HDM2-204ENST00000402412 RCAN3Q9UKA8 241 aa17.63■□□□□ 0.41
R3HDM2-204ENST00000402412 ABCA8O94911 1581 aa17.63■□□□□ 0.41
R3HDM2-204ENST00000402412 GOLGA6L22H0YM25 854 aa17.63■□□□□ 0.41
R3HDM2-204ENST00000402412 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
R3HDM2-204ENST00000402412 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
R3HDM2-204ENST00000402412 GLIPR1L2Q4G1C9 344 aa17.61■□□□□ 0.41
R3HDM2-204ENST00000402412 NUP155O75694 1391 aa17.6■□□□□ 0.41
R3HDM2-204ENST00000402412 ELL2O00472 640 aaPredicted RBP17.6■□□□□ 0.41
R3HDM2-204ENST00000402412 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
R3HDM2-204ENST00000402412 LRRIQ1Q96JM4 1722 aa17.59■□□□□ 0.41
R3HDM2-204ENST00000402412 KIF14Q15058 1648 aa17.59■□□□□ 0.41
R3HDM2-204ENST00000402412 CCER2I3L3R5 266 aa17.59■□□□□ 0.41
R3HDM2-204ENST00000402412 KCNJ4P48050 445 aa17.58■□□□□ 0.4
R3HDM2-204ENST00000402412 HFM1A2PYH4 1435 aa17.57■□□□□ 0.4
R3HDM2-204ENST00000402412 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
R3HDM2-204ENST00000402412 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 FGD1P98174 961 aa17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 CLASP1Q7Z460 1538 aa17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 RSPH4AQ5TD94 716 aa17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 ZNF330Q9Y3S2 320 aaPredicted RBP17.56■□□□□ 0.4
R3HDM2-204ENST00000402412 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
R3HDM2-204ENST00000402412 GPATCH8Q9UKJ3 1502 aaKnown RBP17.55■□□□□ 0.4
R3HDM2-204ENST00000402412 KIF3BO15066 747 aa17.54■□□□□ 0.4
R3HDM2-204ENST00000402412 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
R3HDM2-204ENST00000402412 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
R3HDM2-204ENST00000402412 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
R3HDM2-204ENST00000402412 DAPK1P53355 1430 aa17.53■□□□□ 0.4
R3HDM2-204ENST00000402412 NOL8Q76FK4 1167 aaKnown RBP17.53■□□□□ 0.4
R3HDM2-204ENST00000402412 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
R3HDM2-204ENST00000402412 PTPRKQ15262 1439 aa17.52■□□□□ 0.4
R3HDM2-204ENST00000402412 ITPRIPQ8IWB1 547 aa17.52■□□□□ 0.39
R3HDM2-204ENST00000402412 TRAK1Q9UPV9 953 aa17.51■□□□□ 0.39
R3HDM2-204ENST00000402412 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
R3HDM2-204ENST00000402412 NAIPQ13075 1403 aa17.51■□□□□ 0.39
R3HDM2-204ENST00000402412 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
R3HDM2-204ENST00000402412 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
R3HDM2-204ENST00000402412 MFAP1P55081 439 aaKnown RBP17.49■□□□□ 0.39
R3HDM2-204ENST00000402412 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
R3HDM2-204ENST00000402412 ABCC5O15440 1437 aa17.49■□□□□ 0.39
R3HDM2-204ENST00000402412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.48■□□□□ 0.39
R3HDM2-204ENST00000402412 ARHGAP5Q13017 1502 aa17.48■□□□□ 0.39
R3HDM2-204ENST00000402412 FOXD4L5Q5VV16 416 aaPredicted RBP17.48■□□□□ 0.39
R3HDM2-204ENST00000402412 FOXD4L4Q8WXT5 416 aaPredicted RBP17.48■□□□□ 0.39
R3HDM2-204ENST00000402412 ROCK1Q13464 1354 aa17.48■□□□□ 0.39
R3HDM2-204ENST00000402412 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
R3HDM2-204ENST00000402412 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
R3HDM2-204ENST00000402412 TIMELESSQ9UNS1 1208 aa17.47■□□□□ 0.39
R3HDM2-204ENST00000402412 CASC1Q6TDU7 716 aa17.46■□□□□ 0.39
R3HDM2-204ENST00000402412 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
R3HDM2-204ENST00000402412 ZRSR1Q15695 479 aaKnown RBP17.46■□□□□ 0.39
R3HDM2-204ENST00000402412 FOXD4L6Q3SYB3 417 aaPredicted RBP17.45■□□□□ 0.38
R3HDM2-204ENST00000402412 FOXD4L3Q6VB84 417 aaPredicted RBP17.45■□□□□ 0.38
R3HDM2-204ENST00000402412 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
R3HDM2-204ENST00000402412 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
R3HDM2-204ENST00000402412 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
R3HDM2-204ENST00000402412 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
R3HDM2-204ENST00000402412 HSCBQ8IWL3 235 aa17.44■□□□□ 0.38
R3HDM2-204ENST00000402412 PANK3Q9H999 370 aa17.43■□□□□ 0.38
R3HDM2-204ENST00000402412 NPHP1O15259 732 aa17.43■□□□□ 0.38
R3HDM2-204ENST00000402412 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
R3HDM2-204ENST00000402412 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
R3HDM2-204ENST00000402412 ABCC10Q5T3U5 1492 aa17.41■□□□□ 0.38
R3HDM2-204ENST00000402412 C9orf84Q5VXU9 1444 aa17.41■□□□□ 0.38
R3HDM2-204ENST00000402412 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
R3HDM2-204ENST00000402412 ADCY10Q96PN6 1610 aa17.4■□□□□ 0.38
R3HDM2-204ENST00000402412 KDM5BQ9UGL1 1544 aa17.4■□□□□ 0.38
R3HDM2-204ENST00000402412 GOLGA2Q08379 1002 aa17.39■□□□□ 0.37
R3HDM2-204ENST00000402412 CCDC9Q9Y3X0 531 aaKnown RBP17.39■□□□□ 0.37
R3HDM2-204ENST00000402412 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
R3HDM2-204ENST00000402412 KIF15Q9NS87 1388 aa17.38■□□□□ 0.37
R3HDM2-204ENST00000402412 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
R3HDM2-204ENST00000402412 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
R3HDM2-204ENST00000402412 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
R3HDM2-204ENST00000402412 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
R3HDM2-204ENST00000402412 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms