RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 PANK3Q9H999 370 aa22.82■■□□□ 1.24
SNRNP70-202ENST00000401730 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
SNRNP70-202ENST00000401730 NUP160Q12769 1436 aa22.82■■□□□ 1.24
SNRNP70-202ENST00000401730 ABCC10Q5T3U5 1492 aa22.81■■□□□ 1.24
SNRNP70-202ENST00000401730 KDM5CP41229 1560 aa22.8■■□□□ 1.24
SNRNP70-202ENST00000401730 CDC42BPAQ5VT25 1732 aa22.78■■□□□ 1.24
SNRNP70-202ENST00000401730 ADGBQ8N7X0 1667 aa22.78■■□□□ 1.24
SNRNP70-202ENST00000401730 RALGAPBQ86X10 1494 aa22.78■■□□□ 1.24
SNRNP70-202ENST00000401730 RALBP1Q15311 655 aa22.76■■□□□ 1.23
SNRNP70-202ENST00000401730 RCAN3Q9UKA8 241 aa22.76■■□□□ 1.23
SNRNP70-202ENST00000401730 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
SNRNP70-202ENST00000401730 NLRP13Q86W25 1043 aa22.74■■□□□ 1.23
SNRNP70-202ENST00000401730 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
SNRNP70-202ENST00000401730 ARID4BQ4LE39 1312 aaPredicted RBP22.73■■□□□ 1.23
SNRNP70-202ENST00000401730 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
SNRNP70-202ENST00000401730 RRP1P56182 461 aaKnown RBP22.72■■□□□ 1.23
SNRNP70-202ENST00000401730 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
SNRNP70-202ENST00000401730 UHRF1BP1Q6BDS2 1440 aa22.72■■□□□ 1.23
SNRNP70-202ENST00000401730 ABCA8O94911 1581 aa22.72■■□□□ 1.23
SNRNP70-202ENST00000401730 AFAP1Q8N556 730 aa22.71■■□□□ 1.23
SNRNP70-202ENST00000401730 ARHGAP5Q13017 1502 aa22.71■■□□□ 1.23
SNRNP70-202ENST00000401730 CROCC2H7BZ55 1655 aa22.7■■□□□ 1.22
SNRNP70-202ENST00000401730 FAM135AQ9P2D6 1515 aa22.7■■□□□ 1.22
SNRNP70-202ENST00000401730 CCDC141Q6ZP82 1450 aa22.69■■□□□ 1.22
SNRNP70-202ENST00000401730 PER1O15534 1290 aaPredicted RBP22.69■■□□□ 1.22
SNRNP70-202ENST00000401730 SYCP2Q9BX26 1530 aa22.69■■□□□ 1.22
SNRNP70-202ENST00000401730 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
SNRNP70-202ENST00000401730 BRD4O60885 1362 aaPredicted RBP22.68■■□□□ 1.22
SNRNP70-202ENST00000401730 TESK2Q96S53 571 aa22.67■■□□□ 1.22
SNRNP70-202ENST00000401730 ADCY10Q96PN6 1610 aa22.66■■□□□ 1.22
SNRNP70-202ENST00000401730 PRAG1Q86YV5 1406 aa22.66■■□□□ 1.22
SNRNP70-202ENST00000401730 TMF1P82094 1093 aa22.65■■□□□ 1.22
SNRNP70-202ENST00000401730 PLA2R1Q13018 1463 aa22.65■■□□□ 1.22
SNRNP70-202ENST00000401730 ANP32AP39687 249 aaKnown RBP22.65■■□□□ 1.22
SNRNP70-202ENST00000401730 SAMD9LQ8IVG5 1584 aa22.64■■□□□ 1.22
SNRNP70-202ENST00000401730 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.21
SNRNP70-202ENST00000401730 ADAMTS8Q9UP79 889 aa22.63■■□□□ 1.21
SNRNP70-202ENST00000401730 POLR1AO95602 1720 aaPredicted RBP22.63■■□□□ 1.21
SNRNP70-202ENST00000401730 LRPPRCP42704 1394 aaKnown RBP22.63■■□□□ 1.21
SNRNP70-202ENST00000401730 SHANK2Q9UPX8 1470 aa22.62■■□□□ 1.21
SNRNP70-202ENST00000401730 RSPH4AQ5TD94 716 aa22.62■■□□□ 1.21
SNRNP70-202ENST00000401730 A2MP01023 1474 aa22.61■■□□□ 1.21
SNRNP70-202ENST00000401730 CCDC146Q8IYE0 955 aa22.61■■□□□ 1.21
SNRNP70-202ENST00000401730 C20orf194Q5TEA3 1177 aa22.6■■□□□ 1.21
SNRNP70-202ENST00000401730 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
SNRNP70-202ENST00000401730 KNSTRNQ9Y448 316 aa22.59■■□□□ 1.21
SNRNP70-202ENST00000401730 CRBNQ96SW2 442 aa22.59■■□□□ 1.21
SNRNP70-202ENST00000401730 ARHGEF12Q9NZN5 1544 aa22.58■■□□□ 1.21
SNRNP70-202ENST00000401730 ZBTB47Q9UFB7 747 aaPredicted RBP22.57■■□□□ 1.2
SNRNP70-202ENST00000401730 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
SNRNP70-202ENST00000401730 EFCAB2Q5VUJ9 269 aa22.57■■□□□ 1.2
SNRNP70-202ENST00000401730 PARD3Q8TEW0 1356 aa22.57■■□□□ 1.2
SNRNP70-202ENST00000401730 KDM5DQ9BY66 1539 aa22.55■■□□□ 1.2
SNRNP70-202ENST00000401730 CDC42BPBQ9Y5S2 1711 aa22.55■■□□□ 1.2
SNRNP70-202ENST00000401730 ERBINQ96RT1 1412 aa22.55■■□□□ 1.2
SNRNP70-202ENST00000401730 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
SNRNP70-202ENST00000401730 WDR43Q15061 677 aaKnown RBP eCLIP22.55■■□□□ 1.25e-7■■■□□ 16.9
SNRNP70-202ENST00000401730 LAS1LQ9Y4W2 734 aaKnown RBP22.54■■□□□ 1.2
SNRNP70-202ENST00000401730 SPAG9O60271 1321 aaKnown RBP22.53■■□□□ 1.2
SNRNP70-202ENST00000401730 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
SNRNP70-202ENST00000401730 KIF3BO15066 747 aa22.53■■□□□ 1.2
SNRNP70-202ENST00000401730 IPO9Q96P70 1041 aaKnown RBP22.53■■□□□ 1.2
SNRNP70-202ENST00000401730 RTN4Q9NQC3 1192 aaKnown RBP22.53■■□□□ 1.2
SNRNP70-202ENST00000401730 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
SNRNP70-202ENST00000401730 TRAPPC8Q9Y2L5 1435 aa22.51■■□□□ 1.19
SNRNP70-202ENST00000401730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.51■■□□□ 1.193e-8■■■□□ 15.3
SNRNP70-202ENST00000401730 PDE4AP27815 886 aa22.49■■□□□ 1.19
SNRNP70-202ENST00000401730 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
SNRNP70-202ENST00000401730 PRKCSHP14314 528 aaPredicted RBP22.48■■□□□ 1.19
SNRNP70-202ENST00000401730 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
SNRNP70-202ENST00000401730 ARHGEF5Q12774 1597 aa22.47■■□□□ 1.19
SNRNP70-202ENST00000401730 ANO8Q9HCE9 1232 aaPredicted RBP22.47■■□□□ 1.19
SNRNP70-202ENST00000401730 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
SNRNP70-202ENST00000401730 PDE3BQ13370 1112 aa22.44■■□□□ 1.18
SNRNP70-202ENST00000401730 NUTM2DQ5VT03 806 aaPredicted RBP22.44■■□□□ 1.18
SNRNP70-202ENST00000401730 COL17A1Q9UMD9 1497 aaPredicted RBP22.44■■□□□ 1.18
SNRNP70-202ENST00000401730 PREX2Q70Z35 1606 aa22.43■■□□□ 1.18
SNRNP70-202ENST00000401730 TRPM1Q7Z4N2 1603 aa22.43■■□□□ 1.18
SNRNP70-202ENST00000401730 SLC4A3P48751 1232 aa22.43■■□□□ 1.18
SNRNP70-202ENST00000401730 APAF1O14727 1248 aa22.41■■□□□ 1.18
SNRNP70-202ENST00000401730 RGS3P49796 1198 aa22.4■■□□□ 1.18
SNRNP70-202ENST00000401730 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
SNRNP70-202ENST00000401730 PLEKHH1Q9ULM0 1364 aa22.4■■□□□ 1.18
SNRNP70-202ENST00000401730 MAGI2Q86UL8 1455 aa22.4■■□□□ 1.18
SNRNP70-202ENST00000401730 AMER1Q5JTC6 1135 aaPredicted RBP22.39■■□□□ 1.17
SNRNP70-202ENST00000401730 SPINK5Q9NQ38 1064 aaPredicted RBP22.39■■□□□ 1.17
SNRNP70-202ENST00000401730 CHD1O14646 1710 aa22.38■■□□□ 1.17
SNRNP70-202ENST00000401730 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
SNRNP70-202ENST00000401730 ADGRF5Q8IZF2 1346 aa22.36■■□□□ 1.17
SNRNP70-202ENST00000401730 BACH2Q9BYV9 841 aa22.35■■□□□ 1.17
SNRNP70-202ENST00000401730 TRAK1Q9UPV9 953 aa22.35■■□□□ 1.17
SNRNP70-202ENST00000401730 RRP7AQ9Y3A4 280 aaKnown RBP22.35■■□□□ 1.17
SNRNP70-202ENST00000401730 PLCH2O75038 1416 aa22.35■■□□□ 1.17
SNRNP70-202ENST00000401730 GOLGA2Q08379 1002 aa22.35■■□□□ 1.17
SNRNP70-202ENST00000401730 BCAR3O75815 825 aa22.34■■□□□ 1.17
SNRNP70-202ENST00000401730 SCAPERQ9BY12 1400 aa22.34■■□□□ 1.17
SNRNP70-202ENST00000401730 DUSP27Q5VZP5 1158 aa22.34■■□□□ 1.17
SNRNP70-202ENST00000401730 GGT6Q6P531 493 aa22.34■■□□□ 1.17
SNRNP70-202ENST00000401730 DMRT2Q9Y5R5 561 aa22.34■■□□□ 1.17
SNRNP70-202ENST00000401730 IL27Q8NEV9 243 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms