RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 CDC42BPAQ5VT25 1732 aa14.88□□□□□ -0.03
SCFD2-202ENST00000401642 PLIN1O60240 522 aa14.87□□□□□ -0.03
SCFD2-202ENST00000401642 ABCA8O94911 1581 aa14.87□□□□□ -0.03
SCFD2-202ENST00000401642 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
SCFD2-202ENST00000401642 CCDC141Q6ZP82 1450 aa14.86□□□□□ -0.03
SCFD2-202ENST00000401642 MBD5Q9P267 1494 aa14.86□□□□□ -0.03
SCFD2-202ENST00000401642 ERCC6L2Q5T890 1561 aa14.86□□□□□ -0.03
SCFD2-202ENST00000401642 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
SCFD2-202ENST00000401642 EFCAB2Q5VUJ9 269 aa14.86□□□□□ -0.03
SCFD2-202ENST00000401642 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
SCFD2-202ENST00000401642 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
SCFD2-202ENST00000401642 EXOC6Q8TAG9 804 aa14.83□□□□□ -0.03
SCFD2-202ENST00000401642 KTN1Q86UP2 1357 aaKnown RBP14.83□□□□□ -0.04
SCFD2-202ENST00000401642 DISP3Q9P2K9 1392 aa14.83□□□□□ -0.04
SCFD2-202ENST00000401642 SKAP1Q86WV1 359 aa14.83□□□□□ -0.04
SCFD2-202ENST00000401642 FAM135AQ9P2D6 1515 aa14.83□□□□□ -0.04
SCFD2-202ENST00000401642 SPAG9O60271 1321 aaKnown RBP14.83□□□□□ -0.04
SCFD2-202ENST00000401642 KIF3BO15066 747 aa14.83□□□□□ -0.04
SCFD2-202ENST00000401642 RSPH4AQ5TD94 716 aa14.83□□□□□ -0.04
SCFD2-202ENST00000401642 RALGAPBQ86X10 1494 aa14.82□□□□□ -0.04
SCFD2-202ENST00000401642 RALBP1Q15311 655 aa14.82□□□□□ -0.04
SCFD2-202ENST00000401642 NLRP13Q86W25 1043 aa14.82□□□□□ -0.04
SCFD2-202ENST00000401642 TMF1P82094 1093 aa14.81□□□□□ -0.04
SCFD2-202ENST00000401642 SAMD9LQ8IVG5 1584 aa14.81□□□□□ -0.04
SCFD2-202ENST00000401642 NBR1Q14596 966 aa14.81□□□□□ -0.04
SCFD2-202ENST00000401642 KDM5CP41229 1560 aa14.81□□□□□ -0.04
SCFD2-202ENST00000401642 RCAN3Q9UKA8 241 aa14.79□□□□□ -0.04
SCFD2-202ENST00000401642 TNNT2P45379 298 aaPredicted RBP14.79□□□□□ -0.04
SCFD2-202ENST00000401642 NUTM2DQ5VT03 806 aaPredicted RBP14.79□□□□□ -0.04
SCFD2-202ENST00000401642 CROCC2H7BZ55 1655 aa14.78□□□□□ -0.04
SCFD2-202ENST00000401642 SMG6Q86US8 1419 aaKnown RBP14.78□□□□□ -0.04
SCFD2-202ENST00000401642 TESK2Q96S53 571 aa14.78□□□□□ -0.04
SCFD2-202ENST00000401642 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
SCFD2-202ENST00000401642 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
SCFD2-202ENST00000401642 TTC37Q6PGP7 1564 aa14.78□□□□□ -0.04
SCFD2-202ENST00000401642 PRAG1Q86YV5 1406 aa14.77□□□□□ -0.04
SCFD2-202ENST00000401642 CCDC146Q8IYE0 955 aa14.77□□□□□ -0.04
SCFD2-202ENST00000401642 PLA2R1Q13018 1463 aa14.77□□□□□ -0.04
SCFD2-202ENST00000401642 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
SCFD2-202ENST00000401642 UHRF1BP1Q6BDS2 1440 aa14.77□□□□□ -0.04
SCFD2-202ENST00000401642 TRAPPC8Q9Y2L5 1435 aa14.77□□□□□ -0.04
SCFD2-202ENST00000401642 SHANK2Q9UPX8 1470 aa14.77□□□□□ -0.05
SCFD2-202ENST00000401642 ERICH6BQ5W0A0 696 aa14.77□□□□□ -0.05
SCFD2-202ENST00000401642 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
SCFD2-202ENST00000401642 ADAMTS8Q9UP79 889 aa14.75□□□□□ -0.05
SCFD2-202ENST00000401642 A2MP01023 1474 aa14.75□□□□□ -0.05
SCFD2-202ENST00000401642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.75□□□□□ -0.05
SCFD2-202ENST00000401642 ARHGEF12Q9NZN5 1544 aa14.75□□□□□ -0.05
SCFD2-202ENST00000401642 RRP1P56182 461 aaKnown RBP14.75□□□□□ -0.05
SCFD2-202ENST00000401642 CDC42BPBQ9Y5S2 1711 aa14.74□□□□□ -0.05
SCFD2-202ENST00000401642 BRD4O60885 1362 aaPredicted RBP14.74□□□□□ -0.05
SCFD2-202ENST00000401642 WDR43Q15061 677 aaKnown RBP eCLIP14.74□□□□□ -0.05
SCFD2-202ENST00000401642 CFAP70Q5T0N1 1121 aa14.74□□□□□ -0.05
SCFD2-202ENST00000401642 GGT6Q6P531 493 aa14.74□□□□□ -0.05
SCFD2-202ENST00000401642 CHD1O14646 1710 aa14.73□□□□□ -0.05
SCFD2-202ENST00000401642 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
SCFD2-202ENST00000401642 ERBINQ96RT1 1412 aa14.71□□□□□ -0.05
SCFD2-202ENST00000401642 FANCIQ9NVI1 1328 aa14.71□□□□□ -0.06
SCFD2-202ENST00000401642 NEUROD2Q15784 382 aa14.71□□□□□ -0.06
SCFD2-202ENST00000401642 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
SCFD2-202ENST00000401642 SAFB2Q14151 953 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■■■■□ 23.6
SCFD2-202ENST00000401642 C20orf194Q5TEA3 1177 aa14.69□□□□□ -0.06
SCFD2-202ENST00000401642 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
SCFD2-202ENST00000401642 CRBNQ96SW2 442 aa14.68□□□□□ -0.06
SCFD2-202ENST00000401642 TRAK1Q9UPV9 953 aa14.67□□□□□ -0.06
SCFD2-202ENST00000401642 ARHGEF5Q12774 1597 aa14.67□□□□□ -0.06
SCFD2-202ENST00000401642 PREX2Q70Z35 1606 aa14.67□□□□□ -0.06
SCFD2-202ENST00000401642 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
SCFD2-202ENST00000401642 PPP2R1AP30153 589 aa14.67□□□□□ -0.06
SCFD2-202ENST00000401642 TMEM132EQ6IEE7 984 aa14.67□□□□□ -0.06
SCFD2-202ENST00000401642 LRPPRCP42704 1394 aaKnown RBP14.66□□□□□ -0.06
SCFD2-202ENST00000401642 PARD3Q8TEW0 1356 aa14.66□□□□□ -0.06
SCFD2-202ENST00000401642 PLCH2O75038 1416 aa14.66□□□□□ -0.06
SCFD2-202ENST00000401642 ADGRF5Q8IZF2 1346 aa14.65□□□□□ -0.06
SCFD2-202ENST00000401642 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
SCFD2-202ENST00000401642 ABCC2Q92887 1545 aa14.65□□□□□ -0.07
SCFD2-202ENST00000401642 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCFD2-202ENST00000401642 APAF1O14727 1248 aa14.63□□□□□ -0.07
SCFD2-202ENST00000401642 RRP7AQ9Y3A4 280 aaKnown RBP14.62□□□□□ -0.07
SCFD2-202ENST00000401642 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
SCFD2-202ENST00000401642 RNF123Q5XPI4 1314 aa14.61□□□□□ -0.07
SCFD2-202ENST00000401642 KANK1Q14678 1352 aa14.61□□□□□ -0.07
SCFD2-202ENST00000401642 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
SCFD2-202ENST00000401642 COL17A1Q9UMD9 1497 aaPredicted RBP14.6□□□□□ -0.07
SCFD2-202ENST00000401642 LAS1LQ9Y4W2 734 aaKnown RBP14.6□□□□□ -0.07
SCFD2-202ENST00000401642 DUOX2Q9NRD8 1548 aa14.59□□□□□ -0.07
SCFD2-202ENST00000401642 AMER1Q5JTC6 1135 aaPredicted RBP14.59□□□□□ -0.07
SCFD2-202ENST00000401642 STK26Q9P289 416 aa14.59□□□□□ -0.07
SCFD2-202ENST00000401642 RGS3P49796 1198 aa14.59□□□□□ -0.07
SCFD2-202ENST00000401642 TRPM1Q7Z4N2 1603 aa14.59□□□□□ -0.07
SCFD2-202ENST00000401642 UGGT1Q9NYU2 1555 aa14.58□□□□□ -0.08
SCFD2-202ENST00000401642 MAGI2Q86UL8 1455 aa14.58□□□□□ -0.08
SCFD2-202ENST00000401642 GPRASP1Q5JY77 1395 aa14.58□□□□□ -0.08
SCFD2-202ENST00000401642 RAPGEF3O95398 923 aa14.58□□□□□ -0.08
SCFD2-202ENST00000401642 MYO5CQ9NQX4 1742 aa14.58□□□□□ -0.08
SCFD2-202ENST00000401642 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
SCFD2-202ENST00000401642 CDCA8Q53HL2 280 aa14.57□□□□□ -0.08
SCFD2-202ENST00000401642 SLC12A5Q9H2X9 1139 aa14.57□□□□□ -0.08
SCFD2-202ENST00000401642 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
SCFD2-202ENST00000401642 PDE4AP27815 886 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms