RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 DAPK1P53355 1430 aa24.27■■□□□ 1.48
GAREM2-201ENST00000401533 NBPF1Q3BBV0 1214 aa24.27■■□□□ 1.48
GAREM2-201ENST00000401533 POGKQ9P215 609 aa24.26■■□□□ 1.47
GAREM2-201ENST00000401533 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
GAREM2-201ENST00000401533 RSPH4AQ5TD94 716 aa24.25■■□□□ 1.47
GAREM2-201ENST00000401533 NOP58Q9Y2X3 529 aaKnown RBP24.25■■□□□ 1.47
GAREM2-201ENST00000401533 KANK1Q14678 1352 aa24.24■■□□□ 1.47
GAREM2-201ENST00000401533 ABCC5O15440 1437 aa24.23■■□□□ 1.47
GAREM2-201ENST00000401533 MORC1Q86VD1 984 aa24.23■■□□□ 1.47
GAREM2-201ENST00000401533 RAPGEF6Q8TEU7 1601 aa24.23■■□□□ 1.47
GAREM2-201ENST00000401533 AFAP1Q8N556 730 aa24.23■■□□□ 1.47
GAREM2-201ENST00000401533 CFAP53Q96M91 514 aa24.23■■□□□ 1.47
GAREM2-201ENST00000401533 CNTLNQ9NXG0 1405 aa24.22■■□□□ 1.47
GAREM2-201ENST00000401533 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
GAREM2-201ENST00000401533 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
GAREM2-201ENST00000401533 UPF2Q9HAU5 1272 aaKnown RBP24.21■■□□□ 1.47
GAREM2-201ENST00000401533 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.47
GAREM2-201ENST00000401533 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
GAREM2-201ENST00000401533 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
GAREM2-201ENST00000401533 CEP170Q5SW79 1584 aa24.17■■□□□ 1.46
GAREM2-201ENST00000401533 ROCK1Q13464 1354 aa24.17■■□□□ 1.46
GAREM2-201ENST00000401533 ERICH6BQ5W0A0 696 aa24.16■■□□□ 1.46
GAREM2-201ENST00000401533 ARID4BQ4LE39 1312 aaPredicted RBP24.15■■□□□ 1.46
GAREM2-201ENST00000401533 NUP160Q12769 1436 aa24.13■■□□□ 1.45
GAREM2-201ENST00000401533 RRP7AQ9Y3A4 280 aaKnown RBP24.13■■□□□ 1.45
GAREM2-201ENST00000401533 SOX12O15370 315 aa24.12■■□□□ 1.45
GAREM2-201ENST00000401533 HSP90AA1P07900 732 aaKnown RBP24.11■■□□□ 1.45
GAREM2-201ENST00000401533 FTSJ3Q8IY81 847 aaKnown RBP24.11■■□□□ 1.45
GAREM2-201ENST00000401533 CAMSAP2Q08AD1 1489 aa24.1■■□□□ 1.45
GAREM2-201ENST00000401533 CDCA7LQ96GN5 454 aa24.1■■□□□ 1.45
GAREM2-201ENST00000401533 GPATCH8Q9UKJ3 1502 aaKnown RBP24.1■■□□□ 1.45
GAREM2-201ENST00000401533 KDM6BO15054 1643 aa24.09■■□□□ 1.45
GAREM2-201ENST00000401533 U2AF1L5P0DN76 240 aaPredicted RBP24.09■■□□□ 1.45
GAREM2-201ENST00000401533 U2AF1Q01081 240 aaKnown RBP eCLIP24.09■■□□□ 1.45
GAREM2-201ENST00000401533 MAPK8IP3Q9UPT6 1336 aa24.07■■□□□ 1.44
GAREM2-201ENST00000401533 WASHC2CQ9Y4E1 1318 aa24.07■■□□□ 1.44
GAREM2-201ENST00000401533 CLUAP1Q96AJ1 413 aa24.07■■□□□ 1.44
GAREM2-201ENST00000401533 ANKRD30BQ9BXX2 1392 aa24.06■■□□□ 1.44
GAREM2-201ENST00000401533 ZBTB7CA1YPR0 619 aa24.06■■□□□ 1.44
GAREM2-201ENST00000401533 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
GAREM2-201ENST00000401533 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
GAREM2-201ENST00000401533 NCOA1Q15788 1441 aa24.04■■□□□ 1.44
GAREM2-201ENST00000401533 C9orf84Q5VXU9 1444 aa24.03■■□□□ 1.44
GAREM2-201ENST00000401533 KIAA1107Q9UPP5 1409 aa24.03■■□□□ 1.44
GAREM2-201ENST00000401533 APAF1O14727 1248 aa24.03■■□□□ 1.44
GAREM2-201ENST00000401533 RRP1P56182 461 aaKnown RBP24.03■■□□□ 1.44
GAREM2-201ENST00000401533 ATP10BO94823 1461 aa24.02■■□□□ 1.44
GAREM2-201ENST00000401533 BCL2L13Q9BXK5 485 aa24.02■■□□□ 1.44
GAREM2-201ENST00000401533 GCC2Q8IWJ2 1684 aa24.01■■□□□ 1.43
GAREM2-201ENST00000401533 CRBNQ96SW2 442 aa24■■□□□ 1.43
GAREM2-201ENST00000401533 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
GAREM2-201ENST00000401533 PNISRQ8TF01 805 aaKnown RBP23.98■■□□□ 1.43
GAREM2-201ENST00000401533 DENND4BO75064 1496 aaPredicted RBP23.98■■□□□ 1.43
GAREM2-201ENST00000401533 CFAP70Q5T0N1 1121 aa23.98■■□□□ 1.43
GAREM2-201ENST00000401533 TMEM132EQ6IEE7 984 aa23.97■■□□□ 1.43
GAREM2-201ENST00000401533 DDRGK1Q96HY6 314 aa23.97■■□□□ 1.43
GAREM2-201ENST00000401533 ADAMTS8Q9UP79 889 aa23.97■■□□□ 1.43
GAREM2-201ENST00000401533 KIF14Q15058 1648 aa23.97■■□□□ 1.43
GAREM2-201ENST00000401533 RTN4Q9NQC3 1192 aaKnown RBP23.95■■□□□ 1.43
GAREM2-201ENST00000401533 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
GAREM2-201ENST00000401533 DEKP35659 375 aaKnown RBP23.94■■□□□ 1.42
GAREM2-201ENST00000401533 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
GAREM2-201ENST00000401533 SLC4A3P48751 1232 aa23.92■■□□□ 1.42
GAREM2-201ENST00000401533 NUTM2FA1L443 756 aa23.92■■□□□ 1.42
GAREM2-201ENST00000401533 SPRYD3Q8NCJ5 442 aa23.92■■□□□ 1.42
GAREM2-201ENST00000401533 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
GAREM2-201ENST00000401533 ARHGAP5Q13017 1502 aa23.91■■□□□ 1.42
GAREM2-201ENST00000401533 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
GAREM2-201ENST00000401533 ITSN2Q9NZM3 1697 aa23.89■■□□□ 1.41
GAREM2-201ENST00000401533 IPO9Q96P70 1041 aaKnown RBP23.88■■□□□ 1.41
GAREM2-201ENST00000401533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.88■■□□□ 1.41
GAREM2-201ENST00000401533 PDE4AP27815 886 aa23.87■■□□□ 1.41
GAREM2-201ENST00000401533 EIF3AQ14152 1382 aaKnown RBP23.86■■□□□ 1.41
GAREM2-201ENST00000401533 EIF5BO60841 1220 aaKnown RBP23.86■■□□□ 1.41
GAREM2-201ENST00000401533 MYH16Q9H6N6 1097 aa23.85■■□□□ 1.41
GAREM2-201ENST00000401533 PZPP20742 1482 aa23.85■■□□□ 1.41
GAREM2-201ENST00000401533 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
GAREM2-201ENST00000401533 ABCA8O94911 1581 aa23.84■■□□□ 1.41
GAREM2-201ENST00000401533 MINK1Q8N4C8 1332 aaPredicted RBP23.84■■□□□ 1.41
GAREM2-201ENST00000401533 BECN1Q14457 450 aa23.84■■□□□ 1.41
GAREM2-201ENST00000401533 COG6Q9Y2V7 657 aa23.83■■□□□ 1.41
GAREM2-201ENST00000401533 CENPJQ9HC77 1338 aaPredicted RBP23.81■■□□□ 1.4
GAREM2-201ENST00000401533 SKAP1Q86WV1 359 aa23.79■■□□□ 1.4
GAREM2-201ENST00000401533 ABCC10Q5T3U5 1492 aa23.79■■□□□ 1.4
GAREM2-201ENST00000401533 BRD4O60885 1362 aaPredicted RBP23.79■■□□□ 1.4
GAREM2-201ENST00000401533 ELL2O00472 640 aaPredicted RBP23.79■■□□□ 1.4
GAREM2-201ENST00000401533 ADGRL2O95490 1459 aa23.78■■□□□ 1.4
GAREM2-201ENST00000401533 HDGFL2Q7Z4V5 671 aaPredicted RBP23.78■■□□□ 1.4
GAREM2-201ENST00000401533 SLKQ9H2G2 1235 aaPredicted RBP23.78■■□□□ 1.4
GAREM2-201ENST00000401533 ITPRIPQ8IWB1 547 aa23.78■■□□□ 1.4
GAREM2-201ENST00000401533 PPP2R1AP30153 589 aa23.77■■□□□ 1.4
GAREM2-201ENST00000401533 APBB1O00213 710 aa23.77■■□□□ 1.4
GAREM2-201ENST00000401533 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
GAREM2-201ENST00000401533 TEX14Q8IWB6 1497 aa23.77■■□□□ 1.4
GAREM2-201ENST00000401533 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
GAREM2-201ENST00000401533 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
GAREM2-201ENST00000401533 SLC12A5Q9H2X9 1139 aa23.76■■□□□ 1.39
GAREM2-201ENST00000401533 FANCIQ9NVI1 1328 aa23.76■■□□□ 1.39
GAREM2-201ENST00000401533 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
GAREM2-201ENST00000401533 CABP2Q9NPB3 220 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms