RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
PPP4R1-203ENST00000400556 IPO9Q96P70 1041 aaKnown RBP14.11□□□□□ -0.15
PPP4R1-203ENST00000400556 RALGAPBQ86X10 1494 aa14.11□□□□□ -0.15
PPP4R1-203ENST00000400556 CARMIL2Q6F5E8 1435 aa14.1□□□□□ -0.15
PPP4R1-203ENST00000400556 ADGBQ8N7X0 1667 aa14.09□□□□□ -0.15
PPP4R1-203ENST00000400556 RALBP1Q15311 655 aa14.09□□□□□ -0.15
PPP4R1-203ENST00000400556 ADGRL2O95490 1459 aa14.09□□□□□ -0.15
PPP4R1-203ENST00000400556 PANK3Q9H999 370 aa14.09□□□□□ -0.15
PPP4R1-203ENST00000400556 ITSN2Q9NZM3 1697 aa14.09□□□□□ -0.15
PPP4R1-203ENST00000400556 NLRP13Q86W25 1043 aa14.09□□□□□ -0.15
PPP4R1-203ENST00000400556 ATP10BO94823 1461 aa14.08□□□□□ -0.15
PPP4R1-203ENST00000400556 KTN1Q86UP2 1357 aaKnown RBP14.08□□□□□ -0.16
PPP4R1-203ENST00000400556 BRD4O60885 1362 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-203ENST00000400556 ARID4BQ4LE39 1312 aaPredicted RBP14.07□□□□□ -0.16
PPP4R1-203ENST00000400556 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
PPP4R1-203ENST00000400556 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-203ENST00000400556 DISP3Q9P2K9 1392 aa14.06□□□□□ -0.16
PPP4R1-203ENST00000400556 UHRF1BP1Q6BDS2 1440 aa14.06□□□□□ -0.16
PPP4R1-203ENST00000400556 CCDC144AA2RUR9 1427 aa14.05□□□□□ -0.16
PPP4R1-203ENST00000400556 RTL5Q5HYW3 569 aaPredicted RBP14.05□□□□□ -0.16
PPP4R1-203ENST00000400556 C20orf194Q5TEA3 1177 aa14.05□□□□□ -0.16
PPP4R1-203ENST00000400556 CDC42BPAQ5VT25 1732 aa14.05□□□□□ -0.16
PPP4R1-203ENST00000400556 CRBNQ96SW2 442 aa14.05□□□□□ -0.16
PPP4R1-203ENST00000400556 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
PPP4R1-203ENST00000400556 PDE4AP27815 886 aa14.04□□□□□ -0.16
PPP4R1-203ENST00000400556 CROCC2H7BZ55 1655 aa14.04□□□□□ -0.16
PPP4R1-203ENST00000400556 SYNJ2O15056 1496 aa14.04□□□□□ -0.16
PPP4R1-203ENST00000400556 ABCC10Q5T3U5 1492 aa14.02□□□□□ -0.16
PPP4R1-203ENST00000400556 ADAMTS8Q9UP79 889 aa14.01□□□□□ -0.17
PPP4R1-203ENST00000400556 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
PPP4R1-203ENST00000400556 TESK2Q96S53 571 aa14.01□□□□□ -0.17
PPP4R1-203ENST00000400556 PRAG1Q86YV5 1406 aa14□□□□□ -0.17
PPP4R1-203ENST00000400556 FAM135AQ9P2D6 1515 aa14□□□□□ -0.17
PPP4R1-203ENST00000400556 PARD3Q8TEW0 1356 aa14□□□□□ -0.17
PPP4R1-203ENST00000400556 PTPRGP23470 1445 aa13.99□□□□□ -0.17
PPP4R1-203ENST00000400556 CCDC146Q8IYE0 955 aa13.98□□□□□ -0.17
PPP4R1-203ENST00000400556 ARHGEF12Q9NZN5 1544 aa13.98□□□□□ -0.17
PPP4R1-203ENST00000400556 ADCY10Q96PN6 1610 aa13.97□□□□□ -0.17
PPP4R1-203ENST00000400556 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
PPP4R1-203ENST00000400556 TMF1P82094 1093 aa13.97□□□□□ -0.17
PPP4R1-203ENST00000400556 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
PPP4R1-203ENST00000400556 PLEKHH2Q8IVE3 1493 aa13.97□□□□□ -0.17
PPP4R1-203ENST00000400556 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.17
PPP4R1-203ENST00000400556 NEFMP07197 916 aa13.96□□□□□ -0.17
PPP4R1-203ENST00000400556 A2MP01023 1474 aa13.96□□□□□ -0.17
PPP4R1-203ENST00000400556 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
PPP4R1-203ENST00000400556 BACH2Q9BYV9 841 aa13.96□□□□□ -0.17
PPP4R1-203ENST00000400556 ABCA8O94911 1581 aa13.96□□□□□ -0.17
PPP4R1-203ENST00000400556 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.18
PPP4R1-203ENST00000400556 NUP160Q12769 1436 aa13.95□□□□□ -0.18
PPP4R1-203ENST00000400556 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
PPP4R1-203ENST00000400556 SHANK2Q9UPX8 1470 aa13.94□□□□□ -0.18
PPP4R1-203ENST00000400556 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
PPP4R1-203ENST00000400556 MYT1LQ9UL68 1186 aa13.94□□□□□ -0.18
PPP4R1-203ENST00000400556 WDR43Q15061 677 aaKnown RBP eCLIP13.94□□□□□ -0.18
PPP4R1-203ENST00000400556 KNSTRNQ9Y448 316 aa13.94□□□□□ -0.18
PPP4R1-203ENST00000400556 ERBINQ96RT1 1412 aa13.93□□□□□ -0.18
PPP4R1-203ENST00000400556 ARHGAP5Q13017 1502 aa13.93□□□□□ -0.18
PPP4R1-203ENST00000400556 RGS3P49796 1198 aa13.93□□□□□ -0.18
PPP4R1-203ENST00000400556 PDE3BQ13370 1112 aa13.93□□□□□ -0.18
PPP4R1-203ENST00000400556 PPP2R1AP30153 589 aa13.91□□□□□ -0.18
PPP4R1-203ENST00000400556 IL27Q8NEV9 243 aa13.91□□□□□ -0.18
PPP4R1-203ENST00000400556 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
PPP4R1-203ENST00000400556 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
PPP4R1-203ENST00000400556 E9PCH4 1651 aa13.9□□□□□ -0.18
PPP4R1-203ENST00000400556 COL17A1Q9UMD9 1497 aaPredicted RBP13.9□□□□□ -0.18
PPP4R1-203ENST00000400556 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
PPP4R1-203ENST00000400556 CDC42BPBQ9Y5S2 1711 aa13.89□□□□□ -0.19
PPP4R1-203ENST00000400556 AFAP1Q8N556 730 aa13.89□□□□□ -0.19
PPP4R1-203ENST00000400556 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-203ENST00000400556 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-203ENST00000400556 APAF1O14727 1248 aa13.86□□□□□ -0.19
PPP4R1-203ENST00000400556 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
PPP4R1-203ENST00000400556 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
PPP4R1-203ENST00000400556 MAGI2Q86UL8 1455 aa13.86□□□□□ -0.19
PPP4R1-203ENST00000400556 TTC37Q6PGP7 1564 aa13.86□□□□□ -0.19
PPP4R1-203ENST00000400556 BCAR3O75815 825 aa13.86□□□□□ -0.19
PPP4R1-203ENST00000400556 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
PPP4R1-203ENST00000400556 GPRASP1Q5JY77 1395 aa13.85□□□□□ -0.19
PPP4R1-203ENST00000400556 ARHGEF5Q12774 1597 aa13.85□□□□□ -0.19
PPP4R1-203ENST00000400556 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
PPP4R1-203ENST00000400556 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
PPP4R1-203ENST00000400556 MS4A1P11836 297 aa13.84□□□□□ -0.19
PPP4R1-203ENST00000400556 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
PPP4R1-203ENST00000400556 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
PPP4R1-203ENST00000400556 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
PPP4R1-203ENST00000400556 PRDM15P57071 1507 aaPredicted RBP13.82□□□□□ -0.2
PPP4R1-203ENST00000400556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.82□□□□□ -0.2
PPP4R1-203ENST00000400556 CFAP70Q5T0N1 1121 aa13.82□□□□□ -0.2
PPP4R1-203ENST00000400556 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
PPP4R1-203ENST00000400556 ERCC6L2Q5T890 1561 aa13.81□□□□□ -0.2
PPP4R1-203ENST00000400556 CHGAP10645 457 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-203ENST00000400556 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-203ENST00000400556 WASHC2CQ9Y4E1 1318 aa13.81□□□□□ -0.2
PPP4R1-203ENST00000400556 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
PPP4R1-203ENST00000400556 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
PPP4R1-203ENST00000400556 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
PPP4R1-203ENST00000400556 ZMYM4Q5VZL5 1548 aa13.79□□□□□ -0.2
PPP4R1-203ENST00000400556 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
PPP4R1-203ENST00000400556 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms